Contig 002860:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012N02Sequence244003684 (4)706002860 (4)ref|XP_006345419.1|4e-114PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]
JMSF024I03Sequence677003684 (4)ref|XP_006345419.1|3e-92PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]690002860 (4)ref|XP_006345419.1|3e-95PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]
JMSF040I23Sequence611003684 (4)ref|XP_010324687.1|4e-75PREDICTED: alpha-N-acetylglucosaminidase isoform X1 [Solanum lycopersicum]844002860 (4)ref|XP_006345419.1|7e-126PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]
JMSF052B19Sequence616003684 (4)ref|XP_006345419.1|7e-76PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]881002860 (4)ref|XP_009611357.1|6e-149PREDICTED: LOW QUALITY PROTEIN: alpha-N-acetylglucosaminidase [Nicotiana toment

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+                                                                   CAG
rJMSF052B19+                                    GTCGAAGCTGCTTGGGAGATACTTTATCACACAG
                      ____________________________________________________________
consensus                                       GTCGAAGCTGCTTGGGAGATACTTTATCACACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          TATACAATTGCACAGACGGAATTGCTGACCACAACAAAGACTACATAGTAGAATTTTCCC
rJMSF052B19+          TATACAATTGCACAGACGGAATTGCTGACCACAACAAAGACTACATAGTAGAA-TTTCCC
                      ____________________________________________________________
consensus             TATACAATTGCACAGACGGAATTGCTGACCACAACAAAGACTACATAGTAGAATTTTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          GACTGGGATCCATCCGATCCTACAGGATCTGATATGCCCGAAAATGATCATACAAAAGCA
rJMSF052B19+          GACTGGGATCCATCCGATCCTACAGGATCTGATATGCCCGAAAATGATCATACAAAAGCA
                      ____________________________________________________________
consensus             GACTGGGATCCATCCGATCCTACAGGATCTGATATGCCCGAAAATGATCATACAAAAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          TTTGTTTTGACACATCAGAGGAGAAGATTCTTTCTCCTAGAAACTAGCTCATCTTTGCCT
rJMSF052B19+          TTTGTTTTGACACATCAGAGGAGAAGATTCTTTCTCCTAGAAACTAGCTCATCTTTGCCT
rJMSF012N02+                                                                     T
                      ____________________________________________________________
consensus             TTTGTTTTGACACATCAGAGGAGAAGATTCTTTCTCCTAGAAACTAGCTCATCTTTGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
rJMSF052B19+          CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
rJMSF012N02+          CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
                      ____________________________________________________________
consensus             CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
rJMSF052B19+          GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
rJMSF012N02+          GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
rJMSF024I03+                                        TACAGGTATGATTTGGTGGACTTAACCAGA
                      ____________________________________________________________
consensus             GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
rJMSF052B19+          CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
rJMSF012N02+          CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
rJMSF024I03+          CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
                      ____________________________________________________________
consensus             CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
rJMSF052B19+          AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
rJMSF012N02+          AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
rJMSF024I03+          AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
                      ____________________________________________________________
consensus             AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
rJMSF052B19+          GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
rJMSF012N02+          GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
rJMSF024I03+          GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
                      ____________________________________________________________
consensus             GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
rJMSF052B19+          AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
rJMSF012N02+          AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
rJMSF024I03+          AGCCTGGCAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
                      ____________________________________________________________
consensus             AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
rJMSF052B19+          ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
rJMSF012N02+          ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
rJMSF024I03+          ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
                      ____________________________________________________________
consensus             ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
rJMSF052B19+          TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
rJMSF012N02+          TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
rJMSF024I03+          TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
                      ____________________________________________________________
consensus             TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
rJMSF052B19+          CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
rJMSF012N02+          CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
rJMSF024I03+          CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
                      ____________________________________________________________
consensus             CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
rJMSF052B19+          ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
rJMSF012N02+          ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
rJMSF024I03+          ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
                      ____________________________________________________________
consensus             ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
rJMSF052B19+          GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
rJMSF012N02+          GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
rJMSF024I03+          GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
                      ____________________________________________________________
consensus             GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I23+          C                                                           
rJMSF052B19+          C                                                           
rJMSF012N02+          CATTGCACAACTGTGTGGAACTATATCTAAACATAATAAAAGATC               
rJMSF024I03+          CATTGCACAACTGTGTGGAACTATATCTAAACATAATAAAAGATCATTTTGCAATAACAG
                      ____________________________________________________________
consensus             CATTGCACAACTGTGTGGAACTATATCTAAACATAATAAAAGATCATTTTGCAATAACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024I03+          GAGCCATGGGATCATAATTGCACATTACTAGCACTGCTGTAAAAGATCTGTTTATTCAAT
                      ____________________________________________________________
consensus             GAGCCATGGGATCATAATTGCACATTACTAGCACTGCTGTAAAAGATCTGTTTATTCAAT