Contig 002858:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024C05+                                        TTACNTGCANGATTCCCTCGNGGGAATTGA
                      ____________________________________________________________
consensus                                           TTACNTGCANGATTCCCTCGNGGGAATTGA
 
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rJMSF011B08+                                                    TCTATTCTCGGGGGTAGT
rJMSF024C05+          GCTGAAGACAGCTAGAGGACGGGGCGGTTATATCGAGGACATTCTATTCTCGGGGGTAGT
                      ____________________________________________________________
consensus             GCTGAAGACAGCTAGAGGACGGGGCGGTTATATCGAGGACATTCTATTCTCGGGGGTAGT
 
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rJMSF011B08+          GATGGAAAATGTTCGGGTGGGAATCAATGCTACGAGTTACTATGACACGCATCCAGATGA
rJMSF024C05+          GATGGAAAATGTTCGGGTGGGAATCAATGCTACGAGTTACTATGACACGCATCCAGATGA
                      ____________________________________________________________
consensus             GATGGAAAATGTTCGGGTGGGAATCAATGCTACGAGTTACTATGACACGCATCCAGATGA
 
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rJMSF011B08+          CGAGTTTGATCCTAATGCACTTCCAGCGGTCGGTAATATCACCTTCAAGGACATTATTGG
rJMSF024C05+          CGAGTTTGATCCTAATGCACTTCCAGCGGTCGGTAATATCACCTTCAAGGACATTATTGG
                      ____________________________________________________________
consensus             CGAGTTTGATCCTAATGCACTTCCAGCGGTCGGTAATATCACCTTCAAGGACATTATTGG
 
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rJMSF011B08+          CACGAATATCTCCATAGCCGGAAATTTCAAGGGATTACCTGAATCGCCCTTCACTTCCAT
rJMSF024C05+          CACGAATATCTCCATAGCCGGAAATTTCAAGGGATTACCTGAATCGCCCTTCACTTCCAT
                      ____________________________________________________________
consensus             CACGAATATCTCCATAGCCGGAAATTTCAAGGGATTACCTGAATCGCCCTTCACTTCCAT
 
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rJMSF011B08+          ATGCCTTTCAGATATCTCCTTTTCCATCTCGCCCGACCATTCAACCCCGTGGATATGCTC
rJMSF024C05+          ATGCCTTTCAGATATCTCCTTTTCCATCTCGCCCGACCATTCAACCCCGTGGATATGCTC
                      ____________________________________________________________
consensus             ATGCCTTTCAGATATCTCCTTTTCCATCTCGCCCGACCATTCAACCCCGTGGATATGCTC
 
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rJMSF011B08+          TGACGTTTCGGGTCTTTCCTCAAACGTGTCACCCGAACCATGCCCCGAGCTTCAGAACCC
rJMSF024C05+          TGACGTTTCGGGTCTTTCCTCAAACGTGTCACCCGAACCATGCCCCGAGCTTCAGAACCC
                      ____________________________________________________________
consensus             TGACGTTTCGGGTCTTTCCTCAAACGTGTCACCCGAACCATGCCCCGAGCTTCAGAACCC
 
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rJMSF011B08+          GGTTTCCAGTATATCTACTTCAGCTTGTTTCCCCCTGCTACAATCTTATAATCAAGTTGC
rJMSF024C05+          GGTTTCCAGTATATCTACTTCAGCTTGTTTCTCCCTGCTACAATCTTATAATCAAGTTGC
                      ____________________________________________________________
consensus             GGTTTCCAGTATATCTACTTCAGCTTGTTTCTCCCTGCTACAATCTTATAATCAAGTTGC
 
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rJMSF011B08+          AATCTTATAATCCCTCTGCATAGAACTTATTCAATGCATTGAATCTCTACAACGAGAGAC
rJMSF024C05+          AATCTTATAATCCCTCTGCATAGAACTTATTCAATGCATTGAATCTCTACAACGAGAGAC
                      ____________________________________________________________
consensus             AATCTTATAATCCCTCTGCATAGAACTTATTCAATGCATTGAATCTCTACAACGAGAGAC
 
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rJMSF011B08+          CTATTCTTTGCCGGTGTATAATCTTCCAATAAGATGCGAGCTAGAATTGCAAGTCAAGAT
rJMSF024C05+          CTATTCTTTGCCGGTGTATAATCTTCCAATAAGATGCGAGCTAGAATTGCAAGTCAAGAT
                      ____________________________________________________________
consensus             CTATTCTTTGCCGGTGTATAATCTTCCAATAAGATGCGAGCTAGAATTGCAAGTCAAGAT
 
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rJMSF011B08+          CGAGCTCAGGCAGGTATATTCTTCAAAGTGGCATTACATTATTATTATTATTTTCTGTAC
rJMSF024C05+          CGAGCTCAGGCAGGTATATTCTTCAAAGTGGCATTACATTATTATTATTATTTTCTGTAC
                      ____________________________________________________________
consensus             CGAGCTCAGGCAGGTATATTCTTCAAAGTGGCATTACATTATTATTATTATTTTCTGTAC
 
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rJMSF011B08+          AGCATTGGTTCCTATTTCATCATGTGTAAGAAAAGTTTTGGTAGTGCAGTACATTCACAT
rJMSF024C05+          AGCATTGGTTCCTATTTCATCATGTGTAAGAAAAGTTTTGGTAGTGCAGTACATTCACAT
                      ____________________________________________________________
consensus             AGCATTGGTTCCTATTTCATCATGTGTAAGAAAAGTTTTGGTAGTGCAGTACATTCACAT
 
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rJMSF011B08+          ATACGTTGTTCCTTTGGCTGTTCATTTTTCATTTTTACTTTCTACTCCCATCTTACATTT
rJMSF024C05+          ATACGTTGTTCCTTTGGCTGTTCATTTTTCATTTTTACTTTCTACTCCCATCTTACATTT
                      ____________________________________________________________
consensus             ATACGTTGTTCCTTTGGCTGTTCATTTTTCATTTTTACTTTCTACTCCCATCTTACATTT
 
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rJMSF011B08+          GTAAATGTGGATATGGAAACCGCTCATGATTGTTTGGTGTTAGATTGTGCTGAAAGTGT 
rJMSF024C05+          GTAAATGTGGATATGGAAACCGCTCATGATTGTTTGGTGTTAGATTGTGCTGAAAGTGTT
                      ____________________________________________________________
consensus             GTAAATGTGGATATGGAAACCGCTCATGATTGTTTGGTGTTAGATTGTGCTGAAAGTGTT