Contig 002857:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024B17Sequence709017831ref|XP_009596260.1|60.8PREDICTED: uncharacterized protein LOC104092373 [Nicotiana tomentosiformis] ref|710002857 (2)ref|XP_006339552.1|8e-69PREDICTED: uncharacterized protein LOC102588291 isoform X1 [Solanum tuberosum]
JMSF048C01Sequence581005289 (2)748002857 (2)ref|XP_006339552.1|3e-77PREDICTED: uncharacterized protein LOC102588291 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF048C01+                                          CCACATATCATTACCATTGCTGTAGGGG
                      ____________________________________________________________
consensus                                             CCACATATCATTACCATTGCTGTAGGGG
 
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rJMSF048C01+          AGGACATCACAACAAAGATAATGTCATTTTCACAACAGGGGACAAGAGCTGTGTGCATCT
rJMSF024B17+                    AACAAAGATAATGTCATTTTCACAACAGGGGACAAGAGCTGTGTGCATCT
                      ____________________________________________________________
consensus             AGGACATCACAACAAAGATAATGTCATTTTCACAACAGGGGACAAGAGCTGTGTGCATCT
 
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rJMSF048C01+          TGTCAGCAAATGGCGCTCTTTCCACTGTAACTCTTCATCAACCATCAACTTCTGGTGGCA
rJMSF024B17+          TGTCAGCAAATGGCGCTCTTTCCACTGTAACTCTTCATCAACCATCAACTTCTGGTGGCA
                      ____________________________________________________________
consensus             TGTCAGCAAATGGCGCTCTTTCCACTGTAACTCTTCATCAACCATCAACTTCTGGTGGCA
 
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rJMSF048C01+          CTGTTACACATGAGGGCCGGTTTGAAATACTGTCTCTCTCAGGCTCCTATTTGGTCAGTA
rJMSF024B17+          CTGTTACATATGAGGGCCGGTTTGAAATACTGTCTCTCTCAGGCTCCTATTTGGTCAGTA
                      ____________________________________________________________
consensus             CTGTTACATATGAGGGCCGGTTTGAAATACTGTCTCTCTCAGGCTCCTATTTGGTCAGTA
 
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rJMSF048C01+          ACAGTGGTGGTCCATCGGGCAGGATTGGTAGTCTAAGCGTAGCTCTTGCTAGTCCAGATG
rJMSF024B17+          ACAGTGGTGGTCCATCGGGCAGGATTGGTAGTCTAAGCGTAGCTCTTGCTAGTCCAGATG
                      ____________________________________________________________
consensus             ACAGTGGTGGTCCATCGGGCAGGATTGGTAGTCTAAGCGTAGCTCTTGCTAGTCCAGATG
 
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rJMSF048C01+          GTCGCGTCATAGGTGGAATAGTAAGGGGAGTCCTCATAGCTGCCAGCCCTGTTCAGGTAA
rJMSF024B17+          GTCGCGTCATAGGTGGAATAGTAAGGGGAGTCCTCATAGCTGCCAGCCCTGTTCAGGTAA
                      ____________________________________________________________
consensus             GTCGCGTCATAGGTGGAATAGTAAGGGGAGTCCTCATAGCTGCCAGCCCTGTTCAGGTAA
 
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rJMSF048C01+          TAGCAGGGAGCTTTCTATGTGTTAATTCAAGGGCAAAGAGCAAAGCCGTAGAGAGTGTAG
rJMSF024B17+          TAGCAGGGAGCTTTCTATGTGTTAATTCAAGGGCAAAGAGCAAAGCCGTAGAGAGTGTAG
                      ____________________________________________________________
consensus             TAGCAGGGAGCTTTCTATGTGTTAATTCAAGGGCAAAGAGCAAAGCCGTAGAGAGTGTAG
 
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rJMSF048C01+          AAGGCGCAGGACGTTTGGATAACCAGACTATTGACAATTCTGTATCTCCCAGTAATACTC
rJMSF024B17+          AAGGCGCAGGACGTTTGGATAACCAGACTATTGACAATTCTGTATCTCCCAGTAATACTC
                      ____________________________________________________________
consensus             AAGGCGCAGGACGTTTGGATAACCAGACTATTGACAATTCTGTATCTCCCAGTAATACTC
 
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rJMSF048C01+          AGCAGAACCAGAATCTGAACCTGGCCTCTTCAACGGGCGTCTGGCCTGGTTCAAGCCAAC
rJMSF024B17+          AGCAGAACCAGAATCTGAACCTGGCCTCTTCAACGGGCGTCTGGCCTGGTTCAAGCCAAC
                      ____________________________________________________________
consensus             AGCAGAACCAGAATCTGAACCTGGCCTCTTCAACGGGCGTCTGGCCTGGTTCAAGCCAAC
 
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rJMSF048C01+          TGGATTCACACGCTTACCACACTGACATTGATTTAATGCGGGGATAAAAACGTCAGATAG
rJMSF024B17+          TGGATTCACACGCTTACCACACTGACATTGATTTAATGCGGGGATAAAAACGTCAGATAG
                      ____________________________________________________________
consensus             TGGATTCACACGCTTACCACACTGACATTGATTTAATGCGGGGATAAAAACGTCAGATAG
 
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rJMSF048C01+          CAGGCAGATGGGCTGTACATATTGTGCTGAAGCCAACGTAGTCGAACATCTCCAGCTGCA
rJMSF024B17+          CAGGCAGATGGGCTGTACATATTGTGCTGAAGCCAACGTAGTCGAACATCTCCAGCTGCA
                      ____________________________________________________________
consensus             CAGGCAGATGGGCTGTACATATTGTGCTGAAGCCAACGTAGTCGAACATCTCCAGCTGCA
 
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rJMSF048C01+          ACTTCTTGGACTAATCACAACTCCTTTGTAAGTTAGGACCGTTATGGTTTGCAGTTTGAC
rJMSF024B17+          ACTTCTTGGACTAATCACAACTCCTTTGTAAGTTAGGACCGTTATGGTTTGCAGTTTGAC
                      ____________________________________________________________
consensus             ACTTCTTGGACTAATCACAACTCCTTTGTAAGTTAGGACCGTTATGGTTTGCAGTTTGAC
 
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rJMSF048C01+          AGAGAAATCTAGTGTGTTTTATGGTTTGATTATGTTCTTTGCTTTAGTTTGGACAACATT
rJMSF024B17+          AGAGAAATCTAGTGTGTTTTATGGTTTGATTATGTTCTTTGCTTTAGTTTGGACAACATT
                      ____________________________________________________________
consensus             AGAGAAATCTAGTGTGTTTTATGGTTTGATTATGTTCTTTGCTTTAGTTTGGACAACATT