Contig 002854:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS011A05-                                         AAAATCTTTTCTTAAACCCTAATTTAACTC
                      ____________________________________________________________
consensus                                           AAAATCTTTTCTTAAACCCTAATTTAACTC
 
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JMFS011A05-           CATCATCATCTCCCCAGATCATGCTAATTAAGCTGCTGCTGCTGCTCCACTGCTTCCAAC
                      ____________________________________________________________
consensus             CATCATCATCTCCCCAGATCATGCTAATTAAGCTGCTGCTGCTGCTCCACTGCTTCCAAC
 
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JMFS011A05-           TTCAATTCTGAGTGGTAAATGATGGCATTAACTGGAGAGGATAAGGAGATAAGAATGTCA
                      ____________________________________________________________
consensus             TTCAATTCTGAGTGGTAAATGATGGCATTAACTGGAGAGGATAAGGAGATAAGAATGTCA
 
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JMFS011A05-           GACTCGCTGGCCGGCTACAACCCGCTTGAGGATTTGGATCAGGCGCAGGCGGCGCAGGAT
                      ____________________________________________________________
consensus             GACTCGCTGGCCGGCTACAACCCGCTTGAGGATTTGGATCAGGCGCAGGCGGCGCAGGAT
 
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JMFS011A05-           CTTCAGCACGGCGGCCACGAGAACAAGTACGCCGGTGCAACCAATATTTCCCCCGCCGCC
                      ____________________________________________________________
consensus             CTTCAGCACGGCGGCCACGAGAACAAGTACGCCGGTGCAACCAATATTTCCCCCGCCGCC
 
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JMFS011A05-           GCCGGAGGCGGCGGCGGGGTATTTAAGTCCAAGCTGAGCACCACCGCGGGAGCGCCGAGG
                      ____________________________________________________________
consensus             GCCGGAGGCGGCGGCGGGGTATTTAAGTCCAAGCTGAGCACCACCGCGGGAGCGCCGAGG
 
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JMFS011A05-           GCAAGGTACCGGGAATGTCTTAAGAACCATGCGGCAAGCATCGGAGGGAACGTGACGGAC
rJMSF029M12+                                                 ATCGGAGGGAACGTGACGGAC
                      ____________________________________________________________
consensus             GCAAGGTACCGGGAATGTCTTAAGAACCATGCGGCAAGCATCGGAGGGAACGTGACGGAC
 
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JMFS011A05-           GGGTGCGGCGAGTTCATGCCCAGCGGCGAAGAGGGGACGCTGGAAGCGTTGAAGTGCGCC
rJMSF029M12+          GGGTGCGGCGAGTTCATGCCCAGCGGCGAAGAGGGGACGCTGGAAGCGTTGAAGTGCGCC
rJMSF023C24+                                              ACGCTGGAAGCGTTGAAGTGCGCC
                      ____________________________________________________________
consensus             GGGTGCGGCGAGTTCATGCCCAGCGGCGAAGAGGGGACGCTGGAAGCGTTGAAGTGCGCC
 
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JMFS011A05-           GCCTGTAACTGCCACCGGAACTTCCACCGCAAAGAACGCGGCGGCGGCGGCGGAGATGGT
rJMSF029M12+          GCCTGTAACTGCCACCGGAACTTCCACCGCAAAGAACGCGGCGGCGGCGGCGGAGATGGT
rJMSF023C24+          GCCTGTAACTGCCACCGGAACTTCCACCGCAAAGAACGCGGCGGCGGCGGCGGAGATGGT
                      ____________________________________________________________
consensus             GCCTGTAACTGCCACCGGAACTTCCACCGCAAAGAACGCGGCGGCGGCGGCGGAGATGGT
 
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JMFS011A05-           ATCATAGTGGTGCACCCGCTTCAACTCCCGGGTGGTCCGCCTATGCCCTNCCCGTCATCC
rJMSF029M12+          ATCATAGTGGTGCACCCGCTTCAACTCCCGGGTGGTCCGCCTATGCCCTCCCCGTCATCC
rJMSF023C24+          ATCATAGTGGTGCACCCGCTTCAACTCCCGGGTGGTCCGCCTATGCCCTCCCCGTCATCC
                      ____________________________________________________________
consensus             ATCATAGTGGTGCACCCGCTTCAACTCCCGGGTGGTCCGCCTATGCCCTCCCCGTCATCC
 
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JMFS011A05-           ATCAACCACCACCGGAATACCCCCT                                   
rJMSF029M12+          ATCAACCACCACCGGAATACCCCCTGGGGTGCCCCCACCTCCCTCGCCGCCCAGCCGGTG
rJMSF023C24+          ATCAACCACCACCGGAATACCCCCTGGGGTGCCCCCACCTCCCTCGCCGCCCAGCCGGTG
                      ____________________________________________________________
consensus             ATCAACCACCACCGGAATACCCCCTGGGGTGCCCCCACCTCCCTCGCCGCCCAGCCGGTG
 
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rJMSF029M12+          AAAATGGCCTTCGGCAGCGGCGGCGGCAGCGCCGCCACAGACTCCTCCAGTGAAGAGCTG
rJMSF023C24+          AAAATGGCCTTCGGCAGCGGCGGCGGCAGCGCCGCCACAGACTCCTCCAGTGAAGAGCTG
                      ____________________________________________________________
consensus             AAAATGGCCTTCGGCAGCGGCGGCGGCAGCGCCGCCACAGACTCCTCCAGTGAAGAGCTG
 
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rJMSF029M12+          AATTTCAACGCCTACCATTCCTCCTCCGCCATTCCTTCCCAGTCCGGATTGATTCTGGCC
rJMSF023C24+          AATTTCAACGCCTACCATTCCTCCTCCGCCATTCCTTCCCAGTCCGGATTGATTCTGGCC
                      ____________________________________________________________
consensus             AATTTCAACGCCTACCATTCCTCCTCCGCCATTCCTTCCCAGTCCGGATTGATTCTGGCC
 
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rJMSF029M12+          AAGAAACGATACCGAACAAAGTTCTCGCAAGAACAGAAAGACAAGATGTTGGAGTTCGCG
rJMSF023C24+          AAGAAACGATACCGAACAAAGTTCTCGCAAGAACAGAAAGACAAGATGTTGGAGTTCGCG
                      ____________________________________________________________
consensus             AAGAAACGATACCGAACAAAGTTCTCGCAAGAACAGAAAGACAAGATGTTGGAGTTCGCG
 
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rJMSF029M12+          GAGAAGTTAGGGTGGAGAATCCCCAGAGAAGACGACACTCAACTGCAAACATTCTGCGCC
rJMSF023C24+          GAGAAGTTAGGGTGGAGAATCCCCAGAGAAGACGACACTCAACTGCAAACATTCTGCGCC
                      ____________________________________________________________
consensus             GAGAAGTTAGGGTGGAGAATCCCCAGAGAAGACGACACTCAACTGCAAACATTCTGCGCC
 
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rJMSF029M12+          GAGGTCGGAGTGAAGAGACAAGTTTTTAAGGTTTGGATGCATAACAACAAAAATTCCGCC
rJMSF023C24+          GAGGTCGGAGTGAAGAGACAAGTTTTTAAGGTTTGGATGCATAACAACAAAAATTCCGCC
                      ____________________________________________________________
consensus             GAGGTCGGAGTGAAGAGACAAGTTTTTAAGGTTTGGATGCATAACAACAAAAATTCCGCC
 
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rJMSF029M12+          AAGAAGAACACTCCCCAACAAGAACAAGATCATCAACAACCACCTGGTATTGCCGGAATT
rJMSF023C24+          AAGAAGAACACTCCCCAACAAGAACAAGATCATCAACAACCACCTGGTATTGCCGGAATT
                      ____________________________________________________________
consensus             AAGAAGAACACTCCCCAACAAGAACAAGATCATCAACAACCACCTGGTATTGCCGGAATT
 
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rJMSF029M12+          TAATCAATTCGCCTCTTAATTGCTTCCATAATCCTATTAATAGGTGCAAATCATCATTGA
rJMSF023C24+          TAATCAATTCGCCTCTTAATTGCTTCCATAATCCTATTAATAGGTGCAAATCATCATTGA
                      ____________________________________________________________
consensus             TAATCAATTCGCCTCTTAATTGCTTCCATAATCCTATTAATAGGTGCAAATCATCATTGA
 
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rJMSF029M12+          TCATTAGTTCATGGTGGGCAGGCCAGCTTTCATGATATATATAAATATATATATGTATGT
rJMSF023C24+          TCATTAGTTCATGGTGGGCAGGCCAGCTTTCATGATATATATAAATATATATATGTATGT
                      ____________________________________________________________
consensus             TCATTAGTTCATGGTGGGCAGGCCAGCTTTCATGATATATATAAATATATATATGTATGT
 
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rJMSF029M12+          AACATTCGTAGAATGC                                            
rJMSF023C24+          AACATTCGTAGAATGCATGCATGAGATGTTTGTTTAATTAATTATGCACAATTCTGCCAT
                      ____________________________________________________________
consensus             AACATTCGTAGAATGCATGCATGAGATGTTTGTTTAATTAATTATGCACAATTCTGCCAT