| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF039C16 | Sequence | 480 | 010794 (5) | 718 | 002853 (5) | ref|XP_010323795.1| | 4e-19 | PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum] | |||
| JMFF042D08 | Sequence | 652 | 010794 (5) | ref|XP_006449140.1| | 6e-08 | hypothetical protein CICLE_v10015528mg [Citrus clementina] gb|ESR62380.1| hypoth | 616 | 002853 (5) | ref|XP_009624518.1| | 3e-14 | PREDICTED: mediator-associated protein 1-like [Nicotiana tomentosiformis] |
| JMSF022N14 | Sequence | 674 | 010794 (5) | ref|XP_010109556.1| | 4e-12 | hypothetical protein L484_018291 [Morus notabilis] gb|EXC23160.1| hypothetical p | 793 | 002853 (5) | ref|XP_010323795.1| | 2e-16 | PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum] |
| JMSF034H03 | Sequence | 625 | 010794 (5) | 723 | 002853 (5) | ref|XP_010323795.1| | 5e-20 | PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum] | |||
| JMSF048I09 | Sequence | 708 | 010794 (5) | ref|XP_010109556.1| | 2e-15 | hypothetical protein L484_018291 [Morus notabilis] gb|EXC23160.1| hypothetical p | 761 | 002853 (5) | ref|XP_010323795.1| | 2e-16 | PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF022N14+ AGAGGGGATACCC
____________________________________________________________
consensus AGAGGGGATACCC
. : . : . : . : . : . :
rJMSF048I09+ TCATGATTACAAGACTTTGAGGTCTCAAAAAAGGTTTGGGGCAGTA
rJMSF034H03+ AGTA
rJMFF039C16+ AGTA
rJMSF022N14+ NGATTCCATAAGCCTCATGATTACAAGACTTTGAGGTCTCAAAAAAGGTTTGGGGCAGTA
____________________________________________________________
consensus NGATTCCATAAGCCTCATGATTACAAGACTTTGAGGTCTCAAAAAAGGTTTGGGGCAGTA
. : . : . : . : . : . :
rJMSF048I09+ GTGGAGTTAGCAATGGTGTAAATGAGAACACGAAAAGCTCTAATGTGAAAGCGAAGAGGG
rJMSF034H03+ GTGGAGTTAGCAATGGTGTAAATGAGAACACGAAAAGCTCTAATGTGAAAGCGAAGAGGG
rJMFF039C16+ GTGGAGTTAGCAATGGTGTAAATGAGAACACGAAAAGCTCTAATGTGAAAGCGAAGAGGG
rJMSF022N14+ GTGGAGTTAGCAATGGTGTAAATGAGAACACGAAAAGCTCTAATGTGAAAGCGAAGAGGG
____________________________________________________________
consensus GTGGAGTTAGCAATGGTGTAAATGAGAACACGAAAAGCTCTAATGTGAAAGCGAAGAGGG
. : . : . : . : . : . :
rJMSF048I09+ CTGCTGAAATTAAGAAGATTAGTGAGCCAAAGAAGGGTGCTAAAGTTGGTGTAACCAAGG
rJMSF034H03+ CTGCTGAAATTAAGAAGATTAGTGAGCCAAAGAAGGGTGCTAAAGTTGGTGTAACCAAGG
rJMFF042D08+ TGCTGAAATTAAGAAGATTAGTGAGCCAAAGAAGGGTGCTAAAGTTGGTGTAACCAAGG
rJMFF039C16+ CTGCTGAAATTAAGAAGATTAGTGAGCCAAAGAAGGGTGCTAAAGTTGGTGTAACCAAGG
rJMSF022N14+ CTGCTGAAATTAAGAAGATTAGTGAGCCAAAGAAGGGTGCTAAAGTTGGTGTAACCAAGG
____________________________________________________________
consensus CTGCTGAAATTAAGAAGATTAGTGAGCCAAAGAAGGGTGCTAAAGTTGGTGTAACCAAGG
. : . : . : . : . : . :
rJMSF048I09+ AAGAGCCAAAGAAGGTTGCTAAAGTTAGTGACTTTGATGTAACCAAGGAAGAAGAAAAGG
rJMSF034H03+ AAGAGCCAAAGAAGGTTGCTAAAGTTAGTGACTTTGATGTAACCAAGGAAGAAGAAAAGG
rJMFF042D08+ AAGAGCCAAAGAAGGTTGCTAAAGTTAGTGACTTTGATGTAACCAAGGAAGAAGAAAAGG
rJMFF039C16+ AAGAGCCAAAGAAGGTTGCTAAAGTTAGTGACTTTGATGTAACCAAGGAAGAAGAAAAGG
rJMSF022N14+ AAGAGCCAAAGAAGGTTGCTAAAGTTAGTGACTTTGATGTAACCAAGGAAGAAGAAAAGG
____________________________________________________________
consensus AAGAGCCAAAGAAGGTTGCTAAAGTTAGTGACTTTGATGTAACCAAGGAAGAAGAAAAGG
. : . : . : . : . : . :
rJMSF048I09+ AGAAACCGAATGTTACCAAAGACAAGGATACTGGGATTTCTTTGAAAGATGAAGGGGATT
rJMSF034H03+ AGAAACCGAATGTTACCAAAGACAAGGATACTGGGATTTCTTTGAAAGATGAAGGGGATT
rJMFF042D08+ AGAAACCGAATGTTACCAAAGACAAGGATACTGGGATTTCTTTGAAAGATGAAGGGGATT
rJMFF039C16+ AGAAACCGAATGTTACCAAAGACAAGGATACTGGGATTTCTTTGAAAGATGAAGGGGATT
rJMSF022N14+ AGAAACCGAATGTTACCAAAGACAAGGATACTGGGATTTCTTTGAAAGATGAAGGGGATT
____________________________________________________________
consensus AGAAACCGAATGTTACCAAAGACAAGGATACTGGGATTTCTTTGAAAGATGAAGGGGATT
. : . : . : . : . : . :
rJMSF048I09+ TCAAATCTAAGTATCCACGCCTAGTTCAATCCTTCAATAAAGCAAATATGCCTAAGTTAT
rJMSF034H03+ TCAAATCTAAGTATCCACGCCTAGTTCAATCCTTCAATAAAGCAAATATGCCTAAGTTAT
rJMFF042D08+ TCAAATCTAAGTATCCACGCCTAGTTCAATCCTTCAATAAAGCAAATATGCCTAAGTTAT
rJMFF039C16+ TCAAATCTAAGTATCCACGCCTAGTTCAATCCTTCAATAAAGCAAATATGCCTAAGTTAT
rJMSF022N14+ TCAAATCTAAGTATCCACGCCTAGTTCAATCCTTCAATAAAGCAAATATGCCTAAGTTAT
____________________________________________________________
consensus TCAAATCTAAGTATCCACGCCTAGTTCAATCCTTCAATAAAGCAAATATGCCTAAGTTAT
. : . : . : . : . : . :
rJMSF048I09+ CAGAAGAGGCACTTGCAATTATTCAGGAAAATTTGAGTTTGATAGGGAGTTCCAAAGCAG
rJMSF034H03+ CAGAAGAGGCACTTGCAATTATTCAGGAAAATTTGAGTTTGATAGGGAGTTCCAAAGCAG
rJMFF042D08+ CAGAAGAGGCACTTGCAATTATTCAGGAAAATTTGAGTTTGATAGGGAGTTCCAAAGCAG
rJMFF039C16+ CAGAAGAGGCACTTGCAATTATTCAGGAAAATTTGAGTTTGATAGGGAGTTCCAAAGCAG
rJMSF022N14+ CAGAAGAGGCACTTGCAATTATTCAGGAAAATTTGAGTTTGATAGGGAGTTCCAAAGCAG
____________________________________________________________
consensus CAGAAGAGGCACTTGCAATTATTCAGGAAAATTTGAGTTTGATAGGGAGTTCCAAAGCAG
. : . : . : . : . : . :
rJMSF048I09+ AAGAGTTTGAGGAGCAGTGGACCAAAATACTGAAGGAAGAGGCTGAACTATTCTTGAAGA
rJMSF034H03+ AAGAGTTTGAGGAGCAGTGGACCAAAATACTGAAGGAAGAGGCTGAACTATTCTTGAAGA
rJMFF042D08+ AAGAGTTTGAGGAGCAGTGGACCAAAATACTGAAGGAAGAGGCTGAACTATTCTTGAAGA
rJMFF039C16+ AAGAGTTTGAGGAGCAGTGGACCAAAATACTGAAGGAAGAGGCTGAACTATTCTTGAAGA
rJMSF022N14+ AAGAGTTTGAGGAGCAGTGGACCAAAATACTGAAGGAAGAGGCTGAACTATTCTTGAAGA
____________________________________________________________
consensus AAGAGTTTGAGGAGCAGTGGACCAAAATACTGAAGGAAGAGGCTGAACTATTCTTGAAGA
. : . : . : . : . : . :
rJMSF048I09+ TGACAGATTTGATGGGGGAACAGATCAAATTGATCGTCGAGACTATAAAGAGGTAAATGC
rJMSF034H03+ TGACAGATTTGATGGGGGAACAGATCAAATTGATCGTCGAGACTATAAAGAGGTAAATGC
rJMFF042D08+ TGACAGATTTGATGGGGGAACAGATCAAATTGATCGTCGAGACTATAAAGAGGTAAATGC
rJMFF039C16+ TGACAGATTTGATGGGGGAACAGATCAAATTGATCGTCGAGACTATAAAGAGGTAAATGC
rJMSF022N14+ TGACAGATTTGATGGGGGAACAGATCAAATTGATCGTCGAGACTATAAAGAGGTAAATGC
____________________________________________________________
consensus TGACAGATTTGATGGGGGAACAGATCAAATTGATCGTCGAGACTATAAAGAGGTAAATGC
. : . : . : . : . : . :
rJMSF048I09+ TGAAGCTGAAGCTTTATGTATTATGGCTAGCTATATAGATGTTTCTGCAGGGTGAATTTT
rJMSF034H03+ TGAAGCTGAAGCTTTATGTATTATGGCTAGCTATATAGATGTTTCTGCAGGGTGAATTTT
rJMFF042D08+ TGAAGCTGAAGCTTTATGTATTATGGCTAGCTATATAGATGTTTCTGCAGGGTGAATTTT
rJMFF039C16+ TGAAGCTGAAGCTTTATGTATTATGGCTAGCTATATAGATGTTTCTGCAGGGTGAATTTT
rJMSF022N14+ TGAAGCTGAAGCTTTATGTATTATGGCTAGCTATATAGATGTTTCTGCAGGGTGAATTTT
____________________________________________________________
consensus TGAAGCTGAAGCTTTATGTATTATGGCTAGCTATATAGATGTTTCTGCAGGGTGAATTTT
. : . : . : . : . : . :
rJMSF048I09+ GAGCTTTAGATATTTTGATTTAGTTCTCTGCTCTAGAAACACAAACCTGTTTTGTTGATG
rJMSF034H03+ GAGCTTTAGATATTTTGATTTAGTTCTCTGCTCTAGAAACACAAACCTGTTTTGTTGATG
rJMFF042D08+ GAGCTTTAGATATTTTGATTTAGTTCTCTGCTCTAGAAACACAAACCTGTTTTGTTGATG
rJMFF039C16+ GAGCTTTAGATATTTTGATTTAGTTCTCTGCTCTAGAAACACAAACCTGTTTTGTTGATG
rJMSF022N14+ GAGCTTTAGATATTTTGATTTAGTTCTCTGCTCTAGAAACACAAACCTGTTTTGTTGATG
____________________________________________________________
consensus GAGCTTTAGATATTTTGATTTAGTTCTCTGCTCTAGAAACACAAACCTGTTTTGTTGATG
. : . : . : . : . : . :
rJMSF048I09+ ATGATTAGTGTCATAGGGCGGATTGTGTTTTGTTGTAAGCTTTTTGCTTTAGAAGTCCAC
rJMSF034H03+ ATGATTAGTGTCATAGGGCGGATTGTGTTTTGTTGTAAGCTTTTTGCTTTAGAAGTCCAC
rJMFF042D08+ ATGATTAGTGTCATAGGGCGGATTGTGTTTTGTTGTAAGCTTTTTGCTTTAGAAGTCCAC
rJMFF039C16+ ATGATTAGTGTCATAGGGCGGATTGTGTTTTGTTGTAAGCTTTTTGCTTTAGAAGTCCAC
rJMSF022N14+ ATGATTAGTGTCATAGGGCGGATTGTGTTTTGTTGTAAGCTTTTTGCTTTAGAAGTCCAC
____________________________________________________________
consensus ATGATTAGTGTCATAGGGCGGATTGTGTTTTGTTGTAAGCTTTTTGCTTTAGAAGTCCAC
. : . : . : . : . : . :
rJMSF048I09+ TTTTACATTTTCCTTTCTATTTCCATATTCATATGCTAATTATATTCT
rJMSF034H03+ TTTTACATTTTCCTTTCTATTTCCATATTCATATGCTAATTATATTCT
rJMFF042D08+ TTTTACATTTTCCTT
rJMFF039C16+ TTTTACATTTTCCTTTCTATTTCCATATTCATATGCTAATTATATTCT
rJMSF022N14+ TTTTACATTTTCCTTTCTATTTCCATATTCATATGCTAATTATATTCTTGAAAACTTTAT
____________________________________________________________
consensus TTTTACATTTTCCTTTCTATTTCCATATTCATATGCTAATTATATTCTTGAAAACTTTAT