Contig 002850:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF047A13+                                                                CTACGG
rJMSF022D09+                                                                   CGG
                      ____________________________________________________________
consensus                                                                   CTACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047A13+          CACCCAAATGTGATATTATTTCTTGGTGCATGCACAAAGCCTCCACATCTGTCAATGGTT
rJMSF022D09+          CACCCAAATGTGATATTATTTCTTGGTGCATGCACAAAGCCTCCACATCTGTCAATGGTT
                      ____________________________________________________________
consensus             CACCCAAATGTGATATTATTTCTTGGTGCATGCACAAAGCCTCCACATCTGTCAATGGTT
 
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rJMSF047A13+          ACTGAATACATGGAGATGGGATCGCTATATTATTTGATCCATTTAAGCGGTCAGAAGAAG
rJMSF022D09+          ACTGAATACATGGAGATGGGATCGCTATATTATTTGATCCATTTAAGCGGTCAGAAGAAG
                      ____________________________________________________________
consensus             ACTGAATACATGGAGATGGGATCGCTATATTATTTGATCCATTTAAGCGGTCAGAAGAAG
 
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rJMSF047A13+          AGGCTCAGCTGGCGGAAAAGACTTAGGATGCTGCGTGACATATGCAGGGGGCTGATGTGC
rJMSF022D09+          AGGCTCAGCTGGCGGAAAAGACTTAGGATGCTGCGTGACATATGCAGGGGGCTGATGTGC
                      ____________________________________________________________
consensus             AGGCTCAGCTGGCGGAAAAGACTTAGGATGCTGCGTGACATATGCAGGGGGCTGATGTGC
 
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rJMSF047A13+          ATACATCGGATGAAGATAGTTCACCGAGATCTAAAAAGTGCAAACTGTCTTGTGAATAAA
rJMSF022D09+          ATACATCGGATGAAGATAGTTCACCGAGATCTAAAAAGTGCAAACTGTCTTGTGAATAAA
                      ____________________________________________________________
consensus             ATACATCGGATGAAGATAGTTCACCGAGATCTAAAAAGTGCAAACTGTCTTGTGAATAAA
 
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rJMSF047A13+          CATTGGACAGTGAAAATTTGTGATTTTGGGCTCTCAAGAATAGTGACAGATGCACCAATG
rJMSF022D09+          CATTGGACAGTGAAAATTTGTGATTTTGGGCTCTCAAGAATAGTGACAGATGCACCAATG
                      ____________________________________________________________
consensus             CATTGGACAGTGAAAATTTGTGATTTTGGGCTCTCAAGAATAGTGACAGATGCACCAATG
 
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rJMSF047A13+          GAAGACTCTACATCTGCAGGAACTCCAGAGTGGATGGCTCCAGAACTTATTCGTAGTGAA
rJMSF022D09+          GAAGACTCTACATCTGCAGGAACTCCAGAGTGGATGGCTCCAGAACTTATTCGTAGTGAA
                      ____________________________________________________________
consensus             GAAGACTCTACATCTGCAGGAACTCCAGAGTGGATGGCTCCAGAACTTATTCGTAGTGAA
 
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rJMSF047A13+          CCTTTCTCAGAGAAATGTGACATCTTTAGCCTCGGGGTTGTAATGTGGGAGCTGTGTACT
rJMSF022D09+          CCTTTCTCAGAGAAATGTGACATCTTTAGCCTCGGGGTTGTAATGTGGGAGCTGTGTACT
                      ____________________________________________________________
consensus             CCTTTCTCAGAGAAATGTGACATCTTTAGCCTCGGGGTTGTAATGTGGGAGCTGTGTACT
 
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rJMSF047A13+          CTAAGTAGACCATGGGAAGGTGTACATCCTGAAAGGGTGGTGTATGCTGTTGCTAACGAG
rJMSF022D09+          CTAAGTAGACCATGGGAAGGTGTACATCCTGAAAGGGTGGTGTATGCTGTTGCTAACGAG
                      ____________________________________________________________
consensus             CTAAGTAGACCATGGGAAGGTGTACATCCTGAAAGGGTGGTGTATGCTGTTGCTAACGAG
 
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rJMSF047A13+          GGATCGAGGTTGGAGATACCAGATGGACTCCTGGGCAGACTAATTGCAGATTGTTGGGCA
rJMSF022D09+          GGATCGAGGTTGGAGATACCAGATGGACCCCTGGGCAGACTAATTGCAGATTGTTGGGCA
                      ____________________________________________________________
consensus             GGATCGAGGTTGGAGATACCAGATGGACTCCTGGGCAGACTAATTGCAGATTGTTGGGCA
 
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rJMSF047A13+          GAGCCTCAGGAACGGCCCAGTTGTGAGGAAATTTTGACACGCCTGGTAGATTGTGAATAC
rJMSF022D09+          GAGCCTCAGGAACGGCCCAGTTGTGAGGAAATTTTGACACGCCTGGTAGATTGTGAATAC
                      ____________________________________________________________
consensus             GAGCCTCAGGAACGGCCCAGTTGTGAGGAAATTTTGACACGCCTGGTAGATTGTGAATAC
 
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rJMSF047A13+          TCACTCTGCTGATGCAAAATCTGTTCTTTTGTATAGATACACATGGTAGAGGTATTACAA
rJMSF022D09+          TCACTCTGCTGATGCAAAATCTGTTCTTTTGTATAGATACACATGGTAGAGGTATTACAA
                      ____________________________________________________________
consensus             TCACTCTGCTGATGCAAAATCTGTTCTTTTGTATAGATACACATGGTAGAGGTATTACAA
 
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rJMSF047A13+          TGTGTCGGCTCAAGTTGTAACTTTTTGAGTGATTTTCAGCTCTATAAGTGTAGTGTTTGC
rJMSF022D09+          TGTGTCGGCTCAAGTTGTAACTTTTTGAGTGATTTTCAGCTCTATAAGTGTAGTGTTTGC
                      ____________________________________________________________
consensus             TGTGTCGGCTCAAGTTGTAACTTTTTGAGTGATTTTCAGCTCTATAAGTGTAGTGTTTGC
 
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rJMSF047A13+          CTTCAGCTTGACCATTAAAACATCAAAACCGTT                           
rJMSF022D09+          CTTCAGCTTGACCATTAAAACATCAAAACCGTTTTGGGGCAATCAGAAAGCATCCTTGTT
                      ____________________________________________________________
consensus             CTTCAGCTTGACCATTAAAACATCAAAACCGTTTTGGGGCAATCAGAAAGCATCCTTGTT