clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF019C22 | Sequence | 557 | 006619 (8) | ref|XP_009612424.1| | 1e-60 | PREDICTED: DNA replication licensing factor MCM2 [Nicotiana tomentosiformis] | 694 | 002845 (5) | ref|XP_011075680.1| | 3e-110 | PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor MCM2 [Sesamum |
JMSF015I06 | Sequence | 598 | 006619 (8) | ref|XP_009773559.1| | 1e-63 | PREDICTED: DNA replication licensing factor MCM2 [Nicotiana sylvestris] | 807 | 002845 (5) | ref|XP_011075680.1| | 2e-124 | PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor MCM2 [Sesamum |
JMSF020P08 | Sequence | 664 | 002845 (5) | gb|KDP23237.1| | 1e-138 | hypothetical protein JCGZ_23070 [Jatropha curcas] | 774 | 002845 (5) | ref|XP_011075680.1| | 2e-118 | PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor MCM2 [Sesamum |
JMSF051B15 | Sequence | 661 | 006619 (8) | ref|XP_009773559.1| | 4e-66 | PREDICTED: DNA replication licensing factor MCM2 [Nicotiana sylvestris] | 744 | 002845 (5) | ref|XP_011075680.1| | 8e-120 | PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor MCM2 [Sesamum |
This contig is upended
. : . : . : . : . : . :
JMSF020P08- GAGTGGACACT
____________________________________________________________
consensus GAGTGGACACT
. : . : . : . : . : . :
JMSF020P08- TGAAGGGGGGGCACTTGTTCTTGCTGATAGAGGAATTTGTCTGATTGATGAGTTTGACAA
____________________________________________________________
consensus TGAAGGGGGGGCACTTGTTCTTGCTGATAGAGGAATTTGTCTGATTGATGAGTTTGACAA
. : . : . : . : . : . :
JMSF020P08- GATGAATGATCAGGACAGGGTAAGTATTCATGAAGCCATGGAGCAGCAGAGTATAAGTAT
____________________________________________________________
consensus GATGAATGATCAGGACAGGGTAAGTATTCATGAAGCCATGGAGCAGCAGAGTATAAGTAT
. : . : . : . : . : . :
JMSF020P08- ATCAAAAGCTGGTATCATCACTTCTCTTCAGGCACGCTGTTCCGTCATTGCTGCTGCAAA
____________________________________________________________
consensus ATCAAAAGCTGGTATCATCACTTCTCTTCAGGCACGCTGTTCCGTCATTGCTGCTGCAAA
. : . : . : . : . : . :
JMSF020P08- TCCTATTGGAGGAAGATATGATTCTTCAAAGACTTTTACACAGAATGTAGAATTAACAGA
____________________________________________________________
consensus TCCTATTGGAGGAAGATATGATTCTTCAAAGACTTTTACACAGAATGTAGAATTAACAGA
. : . : . : . : . : . :
JMSF020P08- TCCAATCATTTCTCGTTTTGATATTATGTGTGTTGTCAAGGATGTGGTTGACCCAGTCAT
rJMSF015I06+ CAGTCAT
____________________________________________________________
consensus TCCAATCATTTCTCGTTTTGATATTATGTGTGTTGTCAAGGATGTGGTTGACCCAGTCAT
. : . : . : . : . : . :
JMSF020P08- TGATGAAATGCTAGCAACATTTGTTGTTGACAGTCATTTCAAGTCACAACCAAAAGGGGC
rJMSF015I06+ TGATGAAATGCTAGCAACATTTGTTGNTGACAGTCA-TTCAAGTCACAACCAAAAGGGGC
____________________________________________________________
consensus TGATGAAATGCTAGCAACATTTGTTGTTGACAGTCATTTCAAGTCACAACCAAAAGGGGC
. : . : . : . : . : . :
JMSF020P08- CAATTTGGATGACAAGTCCATGAATAATTCTCAGGATGATCTCCAATCTAATGTGTCACT
rJMSF015I06+ CAATTTGGATGACAAGTCCATGAATAATTCTCAGGATGATCTCCAATCTAATGTGTCACT
rJMSF051B15+ GGATGACAAGTCCATGAATAATTCTCAGGATGATCTCCAATCTAATGTGTCACT
rJMSF020P08+ GGATGACCAGTCCATGAATAATTCTCAGGATGATCTCCAATCTAATGTGTCACT
____________________________________________________________
consensus CAATTTGGATGACAAGTCCATGAATAATTCTCAGGATGATCTCCAATCTAATGTGTCACT
. : . : . : . : . : . :
JMSF020P08- TGATCCTGAGATAATTCCTCAGGATTTGCTAAAGAAGTACTTAACTTATGCGAAGCTAAA
rJMSF015I06+ TGATCCTGAGATAATTCCTCAGGATTTGCTAAAGAAGTACTTAACTTATGCGAAGCTAAA
rJMSF051B15+ TGATCCTGAGATAATTCCTCAGGATTTGCTAAAGAAGTACTTAACTTATGCGAAGCTAAA
rJMFF019C22+ GAGATAATTCCTCAGGATTTGCTAAAGAAGTACTTAACTTATGCGAAGCTAAA
rJMSF020P08+ TGATCCTGAGATAATTCCTCAGGATTTGCTAAAGAAGTACTTAACTTATGCGAAGCTAAA
____________________________________________________________
consensus TGATCCTGAGATAATTCCTCAGGATTTGCTAAAGAAGTACTTAACTTATGCGAAGCTAAA
. : . : . : . : . : . :
JMSF020P08- TGTTTTCCCAAAGTCGCATGATGCTGATTTAGACAAGCTCACACAAGTTTATGCTGAATT
rJMSF015I06+ TGTTTTCCCAAAGTCGCATGATGCTGATTTAGACAAGCTCACACAAGTTTATGCTGAATT
rJMSF051B15+ TGTTTTCCCAAAGTCGCATGATGCTGATTTAGACAAGCTCACACAAGTTTATGCTGAATT
rJMFF019C22+ TGTTTTCCCAAAGTCGCATGATGCTGATTTAGACAAGCTCACACAAGTTTATGCTGAATT
rJMSF020P08+ TGTTTTCCCAAAGTCGCATGATGCTGATTTAGACAAGCTCACACAAGTTTATGCTGAATT
____________________________________________________________
consensus TGTTTTCCCAAAGTCGCATGATGCTGATTTAGACAAGCTCACACAAGTTTATGCTGAATT
. : . : . : . : . : . :
JMSF020P08- GAGAAGAGAATCTTCACATGGACAAGGAGTTCCTATAGCAGTGAGGCATCTAGAGTCGAT
rJMSF015I06+ GAGAAGAGAATCTTCACATGGACAAGGAGTTCCTATAGCAGTAAGGCATCTAGAGTCGAT
rJMSF051B15+ GAGAAGAGAATCTTCACATGGACAAGGAGTTCCTATAGCAGTGAGGCATCTAGAGTCGAT
rJMFF019C22+ GAGAAGAGAATCTTCACATGGACAAGGAGTTCCTATAGCAGTGAGGCATCTAGAGTCGAT
rJMSF020P08+ GAGAAGAGAATCTTCACATGGACAAGGAGTTCCTATAGCAGTGAGGCATCTAGAGTCGAT
____________________________________________________________
consensus GAGAAGAGAATCTTCACATGGACAAGGAGTTCCTATAGCAGTGAGGCATCTAGAGTCGAT
. : . : . : . : . : . :
JMSF020P08- GATTAGAATGTCTGAAGCTCATGCAAGAATGCACCTTAGGCAGCATGTTACTC
rJMSF015I06+ GATTAGAATGTCTGAAGCTCATGCAAGAATGCACCTTAGGCAGCATGTTACTCAAGAAGA
rJMSF051B15+ GATTAGAATGTCTGAAGCTCATGCAAGAATGCACCTTAGGCAGCATGTTACTCAAGAAGA
rJMFF019C22+ GATTAGAATGTCTGAAGCTCATGCAAGAATGCACCTTAGGCAGCATGTTACTCAAGAAGA
rJMSF020P08+ GATTAGAATGTCTGAAGCTCATGCAAGAATGCACCTTAGGCAGCATGTTACTCAAGAAGA
____________________________________________________________
consensus GATTAGAATGTCTGAAGCTCATGCAAGAATGCACCTTAGGCAGCATGTTACTCAAGAAGA
. : . : . : . : . : . :
rJMSF015I06+ TGTAGACATGGCTATTCGAGTCCTTCTGGAATCATTCATATCCACACAAAAATTTGGAGT
rJMSF051B15+ TGTAGACATGGCTATTCGAGTCCTTCTGGAATCATTCATATCCACACAAAAATTTGGAGT
rJMFF019C22+ AGTAGACATGGCTATTCGAGTCCTTCTGGAATCATTCATATCCACACAAAAATTTGGAGT
rJMSF020P08+ TGTAGACATGGCTATTCGAGTCCTTCTGGAATCATTCATATCCACACAAAAATTTGGAGT
____________________________________________________________
consensus TGTAGACATGGCTATTCGAGTCCTTCTGGAATCATTCATATCCACACAAAAATTTGGAGT
. : . : . : . : . : . :
rJMSF015I06+ TCAGAAAGCTTTGCAAAGGAGCTTCAGAAGGTACATGACATTTAAAAAGGATTTCAATGC
rJMSF051B15+ TCAGAAAGCTTTGCAAAGGAGCTTCAGAAGGTACATGACATTTAAAAAGGATTTCAATGC
rJMFF019C22+ TCAGAAAGCTTTGCAAAGGAGCTTCAGAAGGTACATGACATTTAAAAAGGATTTCAATGC
rJMSF020P08+ TCAGAAAGCTTTGCAAAGGAGCTTCAGAAGGTACATGACATTTAAAAAGGATTTCAATGC
____________________________________________________________
consensus TCAGAAAGCTTTGCAAAGGAGCTTCAGAAGGTACATGACATTTAAAAAGGATTTCAATGC
. : . : . : . : . : . :
rJMSF015I06+ GATTGTGCTCCATCTATTGCGCGGGCTCGTGAAGGATGCCATCCACATGGAAGAAATCAT
rJMSF051B15+ GATTGTGCTCCATCTATTGCGCGGGCTCGTGAAGGATGCCATCCACATGGAAGAAATCAT
rJMFF019C22+ GATTGTGCTCCATCTATTGCGCGGGCTCGTGAAGGATGCCATCCACATGGAAGAAATCAT
rJMSF020P08+ GATTGTGCTCCATCTATTGCGCGGGCTCGTGAAGGATGCCATCCACATGGAAGAAATCAT
____________________________________________________________
consensus GATTGTGCTCCATCTATTGCGCGGGCTCGTGAAGGATGCCATCCACATGGAAGAAATCAT
. : . : . : . : . : . :
rJMSF015I06+ GTCTGGCTCTGCTGCGAATTTGAGCCATGTTACTGTGAAAGTGGATGAACTGCAAAGCAA
rJMSF051B15+ GTCTGGCTCTGCTGCGAATTTGAGCCATGTTACTGTGAAAGTGGATGAACTGCAAAGCAA
rJMFF019C22+ GTCTGGCTCTGCTGCGAATTTGAGCCATGTTACTGTGAAAGTGGATGAACTGCAAAGCAA
rJMSF020P08+ GTCTGGCTCTGCTGCGAATTTGAGCCATGTTACTGTGAAAGTGGATGAACTGCAAAGCAA
____________________________________________________________
consensus GTCTGGCTCTGCTGCGAATTTGAGCCATGTTACTGTGAAAGTGGATGAACTGCAAAGCAA
. : . : . : . : . : . :
rJMSF015I06+ GGCACTTGATTATGGCATCTCAGATCTTAGAGAATTCTTTACCAGTGCTGAATTTTCTAG
rJMSF051B15+ GGCACTTGATTATGGCATCTCAGATCTTAGAGAATTCTTTACCAGTGCTGAATTTTCTAG
rJMFF019C22+ GGCACTTGATTATGGCATCTCAGATCTTAGAGAATTCTTTACCAGTGCTGAATTTTCTAG
rJMSF020P08+ GGCACTTGATTATGGCATCTCAGATCTTAGAGAATTCTTTACCAGTGCTGAATTTTCTAG
____________________________________________________________
consensus GGCACTTGATTATGGCATCTCAGATCTTAGAGAATTCTTTACCAGTGCTGAATTTTCTAG
. : . : . : . : . : . :
rJMSF015I06+ AGCCAACCTTGAGGTGGACGAGGCGCGCGGTGTAATAAGGCACCGCCTTTCTACCTGATT
rJMSF051B15+ AGCCAACTTTGAGGTGGACGAGGCGCGCGGTGTAATAAGGCACCGCCTTTCTACCTGATT
rJMFF019C22+ AGCCAACTTTGAGGTGGACGAGGCGCGCGGTGTAATAAGGCACCGCCTTTCTACCTGATT
rJMSF020P08+ AGCCAACTTTGAGGTGGACGAGGCGCGCGGTGTAATAAGGCACCGCCTTTCTACCTGATT
____________________________________________________________
consensus AGCCAACTTTGAGGTGGACGAGGCGCGCGGTGTAATAAGGCACCGCCTTTCTACCTGATT
. : . : . : . : . : . :
rJMSF015I06+ TAAAGATTAGAGACATTCAGCGAGCAGGGCTTTTTGTTGTATTGCTTCTATTTTAAAAAT
rJMSF051B15+ TAAAGATTAGAGACATTCAGCGAGCAGGGCTTTTTGTTGTATTGCTTCTATTTTAAAAAT
rJMFF019C22+ TAAAGATTAGAGACATTCAGCGAGCAGGGCTTTTTGTTGTATTGCTTCTATNNTAAAAAT
rJMSF020P08+ TAAAGATTAGAGACATTCAGCGAGCAGGGCTTTTTGTTGTATTGCTTCTATTTTAAAAAT
____________________________________________________________
consensus TAAAGATTAGAGACATTCAGCGAGCAGGGCTTTTTGTTGTATTGCTTCTATTTTAAAAAT
. : . : . : . : . : . :
rJMSF015I06+ GTAAC
rJMSF051B15+ GTAAC
rJMFF019C22+ GTAA-CAGTACCATAGATCTGTGTTTATATAGTGACTAGTGA
rJMSF020P08+ GTAACCAGTACCATAGATCTGTGTTTATATAGTGACTAGTGAGTGATTATAAATAGTACC
____________________________________________________________
consensus GTAACCAGTACCATAGATCTGTGTTTATATAGTGACTAGTGAGTGATTATAAATAGTACC