Contig 002844:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF020L13+                                                             GAAAAAAGAG
rJMSF020L13-                                          TAACACTCAATGGAAACAGAAAAAAGAG
                      ____________________________________________________________
consensus                                             TAACACTCAATGGAAACAGAAAAAAGAG
 
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JMSF020L13+           CAGTTTGGACTATGTTTGCTCTGTAGGCTTGAAGTTAAAAGTTGAGCCAAATAGATCCTT
rJMSF020L13-          CAGTTTGGACTATGTTTGCTCTGTAGGCTTGAAGTTAAAAGTTGAGCCAAATAGATCCTT
                      ____________________________________________________________
consensus             CAGTTTGGACTATGTTTGCTCTGTAGGCTTGAAGTTAAAAGTTGAGCCAAATAGATCCTT
 
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JMSF020L13+           AGAAACATTACTGATCAATGATCATACATACATCAAGGATTATTTCCAGTATCATTGCCT
rJMSF020L13-          AGAAACATTACTGATCAATGATCATACATACATCAAGGATTATTTCCAGTATCATTGCCT
                      ____________________________________________________________
consensus             AGAAACATTACTGATCAATGATCATACATACATCAAGGATTATTTCCAGTATCATTGCCT
 
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JMSF020L13+           GTACTGTAGCTCAAGGTCCCTGTCCTTAACTTGTCCACAAAATCTGTGGCGCCCGAGAAT
rJMSF020L13-          GTACTGTAGCTCAAGGTCCCTGTCCTTAACTTGTCCACAAAATCTGTGGCGCCCGAGAAT
                      ____________________________________________________________
consensus             GTACTGTAGCTCAAGGTCCCTGTCCTTAACTTGTCCACAAAATCTGTGGCGCCCGAGAAT
 
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JMSF020L13+           TCTTGTTTTTCTTTCTTTAGGAATTCAAGGCGAGAACTAATGAGCCGCTTCTGTTCTTCT
rJMSF020L13-          TCTTGTTTTTCTTTCTTTAGGAATTCAAGGCGAGAACTAATGAGCCGCTTCTGTTCTTCT
                      ____________________________________________________________
consensus             TCTTGTTTTTCTTTCTTTAGGAATTCAAGGCGAGAACTAATGAGCCGCTTCTGTTCTTCT
 
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JMSF020L13+           GCCTTTTCCAGCATGCCCATCAAGTGGTTGATCTCGTTCTTCTTCGTTTCTAATAAATAC
rJMSF020L13-          GCCTTTTCCAGCATGCCCATCAAGTGGTTGATCTCGTTCTTCTTCGTTTCTAATAAATAC
                      ____________________________________________________________
consensus             GCCTTTTCCAGCATGCCCATCAAGTGGTTGATCTCGTTCTTCTTCGTTTCTAATAAATAC
 
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JMSF020L13+           TGGCCAGTTTCTTCAATATTACTCTTCTCAGAAGAGAGTGGATCCAAGCTTTGCTCTTCT
rJMSF020L13-          TGGCCAGTTTCTTCAATATTACTCTTCTCAGAAGAGAGTGGATCCAAGCTTTGCTCTTCT
                      ____________________________________________________________
consensus             TGGCCAGTTTCTTCAATATTACTCTTCTCAGAAGAGAGTGGATCCAAGCTTTGCTCTTCT
 
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JMSF020L13+           ACAAGATGCTCCACAGTATCAAGAACAGTTCCTGCCTCTGTTTCCAGGCATAAAGACTCA
rJMSF020L13-          ACAAGATGCTCCACAGTATCAAGAACAGTTCCTGCCTCTGTTTCCAGGCATAAAGACTCA
                      ____________________________________________________________
consensus             ACAAGATGCTCCACAGTATCAAGAACAGTTCCTGCCTCTGTTTCCAGGCATAAAGACTCA
 
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JMSF020L13+           AACTCATCCTCTATGTTTTCGTGCAACGATGAAACAACCTGAATGAATAACCGGTGGAGG
rJMSF020L13-          AACTCATCCTCTATGTTTTCGTGCAACGATGAAACAACCTGAATGAATAACCGGTGGAGG
                      ____________________________________________________________
consensus             AACTCATCCTCTATGTTTTCGTGCAACGATGAAACAACCTGAATGAATAACCGGTGGAGG
 
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JMSF020L13+           CGTTCTTGCTCCGCTGGACTGAACTTTGAGAAAGCTTTGCAAAATTCCTCCTTGGAGCAG
rJMSF020L13-          CGTTCTTGCTCCGCTGGACTGAACTTTGAGAAAGCTTTGCAAAATTCCTCCTTGGAGCAG
                      ____________________________________________________________
consensus             CGTTCTTGCTCCGCTGGACTGAACTTTGAGAAAGCTTTGCAAAATTCCTCCTTGGAGCAG
 
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JMSF020L13+           GCTGTGAGCAAGGAACGCACTCCAAGCTTGAAAGACTTCTTCAGATTCGTCTGCCTCGTC
rJMSF020L13-          GCTGTGAGCAAGGAACGCACTCCAAGCTTGAAAGACTTCTTCAGATTCGTCTGCCTCGTC
                      ____________________________________________________________
consensus             GCTGTGAGCAAGGAACGCACTCCAAGCTTGAAAGACTTCTTCAGATTCGTCTGCCTCGTC
 
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JMSF020L13+           CCTGGATTACTGTCCATTCTCTCAAGCTGACAGACCGAGAAGAGAGAGACAAAGAGCGCC
rJMSF020L13-          CCTGGATTACTGTCCATTCTCTCAAGCTGACAGACCGAGAAGAGAGAGACAAAGAGCGCC
                      ____________________________________________________________
consensus             CCTGGATTACTGTCCATTCTCTCAAGCTGACAGACCGAGAAGAGAGAGACAAAGAGCGCC