Contig 002842:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020I23Sequence626002842 (2)ref|XP_009777724.1|2e-98PREDICTED: protein WALLS ARE THIN 1-like [Nicotiana sylvestris]740002842 (2)ref|XP_009777724.1|1e-107PREDICTED: protein WALLS ARE THIN 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF020I23-                                                  GATGGTTTTGCTGGTCAGCA
                      ____________________________________________________________
consensus                                                     GATGGTTTTGCTGGTCAGCA
 
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rJMSF020I23-          TTTTCCGTTGACTGCAGCAGTGGCTGAGACAGTGAGGACTTGATGATATGGCTGGCCGGC
                      ____________________________________________________________
consensus             TTTTCCGTTGACTGCAGCAGTGGCTGAGACAGTGAGGACTTGATGATATGGCTGGCCGGC
 
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JMSF020I23+                                             TCCCCGCCCTGGCAAACTTTGCTTCT
rJMSF020I23-          GCCCTGCTGTGGTCGCCGGCGGCCTGAATCACCGTCCCCGCCCTGGCAAACTTTGCTTCT
                      ____________________________________________________________
consensus             GCCCTGCTGTGGTCGCCGGCGGCCTGAATCACCGTCCCCGCCCTGGCAAACTTTGCTTCT
 
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JMSF020I23+           TCGTTCTTCCCCCATAGCACAAAGTATAACCCTATTATGATCAGCACTGCTCCAATGATC
rJMSF020I23-          TCGTTCTTCCCCCATAGCACAAAGTATAACCCTATTATGATCAGCACTGCTCCAATGATC
                      ____________________________________________________________
consensus             TCGTTCTTCCCCCATAGCACAAAGTATAACCCTATTATGATCAGCACTGCTCCAATGATC
 
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JMSF020I23+           CCTCCCAAGTAGAACTCTTCCCCAAGAACCGCGGATGCCACGAGGGCGACAACAAGGGTC
rJMSF020I23-          CCTCCCAAGTAGAACTCTTCCCCAAGAACCGCGGATGCCACGAGGGCGACAACAAGGGTC
                      ____________________________________________________________
consensus             CCTCCCAAGTAGAACTCTTCCCCAAGAACCGCGGATGCCACGAGGGCGACAACAAGGGTC
 
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JMSF020I23+           TGAACTGGCTGGTAAACTGCCACGAAGACCGGGTCGCCCCTGTCAATGCACCATATTTGT
rJMSF020I23-          TGAACTGGCTGGTAAACTGCCACGAAGACCGGGTCGCCCCTGTCAATGCACCATATTTGT
                      ____________________________________________________________
consensus             TGAACTGGCTGGTAAACTGCCACGAAGACCGGGTCGCCCCTGTCAATGCACCATATTTGT
 
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JMSF020I23+           ACTGCAAATGCTATCCCTGATGCCACCACTCCAGCGTAGAAGACGCTGAAGAGCTCGGCG
rJMSF020I23-          ACTGCAAATGCTATCCCTGATGCCACCACTCCAGCGTAGAAGACGCTGAAGAGCTCGGCG
                      ____________________________________________________________
consensus             ACTGCAAATGCTATCCCTGATGCCACCACTCCAGCGTAGAAGACGCTGAAGAGCTCGGCG
 
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JMSF020I23+           CCGGAGTGGACGAGCCAGGCCTGAGGGTCTCTCTCGCAAAAAGCGGCGATGATGAGGAAC
rJMSF020I23-          CCGGAGTGGACGAGCCAGGCCTGAGGGTCTCTCTCGCAAAAAGCGGCGATGATGAGGAAC
                      ____________________________________________________________
consensus             CCGGAGTGGACGAGCCAGGCCTGAGGGTCTCTCTCGCAAAAAGCGGCGATGATGAGGAAC
 
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JMSF020I23+           TGAATGACGCCAAAGAAGCACTGGTAAGAGGTGACGGAGAGGCGGGCCGGGTACTTCTTC
rJMSF020I23-          TGAATGACGCCAAAGAAGCACTGGTAAGAGGTGACGGAGAGGCGGGCCGGGTACTTCTTC
                      ____________________________________________________________
consensus             TGAATGACGCCAAAGAAGCACTGGTAAGAGGTGACGGAGAGGCGGGCCGGGTACTTCTTC
 
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JMSF020I23+           AGAACGGGGGCCTGCAGGACGAGCCAGCTGGCCCACGACAGGCAATGCCCGATCAAGAAG
rJMSF020I23-          AGAACGGGGGCCTGCAGGACGAGCCAGCTGGCCCACGACAGGCAATGCCCGATCAAGAAG
                      ____________________________________________________________
consensus             AGAACGGGGGCCTGCAGGACGAGCCAGCTGGCCCACGACAGGCAATGCCCGATCAAGAAG
 
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JMSF020I23+           ATGCACCCCATGGTCCAGCTCTTGCCGCTTCCGCCCACGTCGTCTCCCAGCCTAGCCCCA
rJMSF020I23-          ATGCACCCCATGGTCCAGCTCTTGCCGCTTCCGCCCACGTCGTCTCCCAGCCTAGCCCCA
                      ____________________________________________________________
consensus             ATGCACCCCATGGTCCAGCTCTTGCCGCTTCCGCCCACGTCGTCTCCCAGCCTAGCCCCA
 
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JMSF020I23+           CCGTGCAGCATCGCCGCCGGCGGAACTATCTGCAGCGACGGCGTCGGGCTGTAGATCGTC
rJMSF020I23-          CCGTGCAGCATCGCCGCCGGCGGAACTATCTGCAGCGACGGCGTCGGGCTGTAGATCGTC
                      ____________________________________________________________
consensus             CCGTGCAGCATCGCCGCCGGCGGAACTATCTGCAGCGACGGCGTCGGGCTGTAGATCGTC
 
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JMSF020I23+           GGCCCCTTGTAGAGTGTGATCACTGATGCCCCACACACGCACAGCAATGTCCCCATAACC
rJMSF020I23-          GGCCCCTTGTAGAGTGTGATCACTGATGCCCCACACACGCACAGCAATGTCCCCATAACC
                      ____________________________________________________________
consensus             GGCCCCTTGTAGAGTGTGATCACTGATGCCCCACACACGCACAGCAATGTCCCCATAACC