Contig 002837:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN042H12Sequence486002837 (2)ref|XP_009592408.1|216PREDICTED: uncharacterized protein LOC104089261 [Nicotiana tomentosiformis]
JMSF019H23Sequence220023178ref|XP_009592408.1|53.5PREDICTED: uncharacterized protein LOC104089261 [Nicotiana tomentosiformis]757002837 (2)ref|XP_009592408.1|209PREDICTED: uncharacterized protein LOC104089261 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN042H12-                          GAAGACAACAATGGGGATGGCGGTGTTGATTCGTCAGATGCCGAG
                      ____________________________________________________________
consensus                            GAAGACAACAATGGGGATGGCGGTGTTGATTCGTCAGATGCCGAG
 
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JMFN042H12-           AGCTCTCTCTCATTCCAAGCTCAGTTTCCTCCCCAATTGGGAAACCAAGCCAAAATAGAC
                      ____________________________________________________________
consensus             AGCTCTCTCTCATTCCAAGCTCAGTTTCCTCCCCAATTGGGAAACCAAGCCAAAATAGAC
 
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JMFN042H12-           CCTGATATGATCATTGCAGACTTGGTGGTTAGGACCGTGGAGTGCGAGATCATGCTGCAC
                      ____________________________________________________________
consensus             CCTGATATGATCATTGCAGACTTGGTGGTTAGGACCGTGGAGTGCGAGATCATGCTGCAC
 
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JMFN042H12-           GAGCTCGCCCAGGTGGAGAGGCGCAGCTCGGAGTCGTCGAGGAAGATGGAGCTGCAGAAG
                      ____________________________________________________________
consensus             GAGCTCGCCCAGGTGGAGAGGCGCAGCTCGGAGTCGTCGAGGAAGATGGAGCTGCAGAAG
 
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JMFN042H12-           AGCCTGGTGGAGGTGTTGGAGTCGGAGAGGCTGATTTTGCTGAACGAAAATGCGAGGCTC
rJMSF019H23+                                 GGAGAGGCTGATTTTGCTGAACGAAAATGCGAGGCTC
                      ____________________________________________________________
consensus             AGCCTGGTGGAGGTGTTGGAGTCGGAGAGGCTGATTTTGCTGAACGAAAATGCGAGGCTC
 
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JMFN042H12-           GGGTACCAGGTCTCTGCGCTCGCGGAGGAGAACAAAGGGCTGGCGTCGGAGTCCCTGTTC
rJMSF019H23+          GGGTACCAGGTCTCTGCGCTCGCGGAGGAGAACAAAGGGCTGGCGTCGGAGTCCCTGTTC
                      ____________________________________________________________
consensus             GGGTACCAGGTCTCTGCGCTCGCGGAGGAGAACAAAGGGCTGGCGTCGGAGTCCCTGTTC
 
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JMFN042H12-           ATGAAGAGGAAGGCGGCTGATCTCGCGAGGTGCCTGTTGAAGATGAGGGAGGACCATAGG
rJMSF019H23+          ATGAAGAGGAAGGCGGCTGATCTCGCGAGGTGCCTGTTGAAGATGAGGGAGGACCATAGG
                      ____________________________________________________________
consensus             ATGAAGAGGAAGGCGGCTGATCTCGCGAGGTGCCTGTTGAAGATGAGGGAGGACCATAGG
 
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JMFN042H12-           GTGTTCATGCTGAGCCGCAAAATCGAGGACCTCCAAGGGCAGATCCACGGGCTCGAGAAG
rJMSF019H23+          GTGTTCATGCTGAGCCGCAAAATCGAGGACCTCCAAGGGCAGATCCACGGGCTCGAGAAG
                      ____________________________________________________________
consensus             GTGTTCATGCTGAGCCGCAAAATCGAGGACCTCCAAGGGCAGATCCACGGGCTCGAGAAG
 
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JMFN042H12-           AGGAACAGGGAGTACTAC                                          
rJMSF019H23+          AGGAACAGGGAGTACTACGAGCAGCTCGTGAAGCATGAAGAGGAGAAGAGGATCAAGATG
                      ____________________________________________________________
consensus             AGGAACAGGGAGTACTACGAGCAGCTCGTGAAGCATGAAGAGGAGAAGAGGATCAAGATG
 
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rJMSF019H23+          AAGGTGAAAAGTTTGGGGAGCTTCAAGGGGTGTTTCCAAGTACATGGAGATGTCACTTCT
                      ____________________________________________________________
consensus             AAGGTGAAAAGTTTGGGGAGCTTCAAGGGGTGTTTCCAAGTACATGGAGATGTCACTTCT
 
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rJMSF019H23+          TGGGTCAACAATGGCAATAGTAGTACTAGTACTAGTATTCCTAGTGTGAAGAAGATTGGT
                      ____________________________________________________________
consensus             TGGGTCAACAATGGCAATAGTAGTACTAGTACTAGTATTCCTAGTGTGAAGAAGATTGGT
 
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rJMSF019H23+          CAGCAAGGCAATGGGGGTGGTTCTAAGCTGTGGGGTAGGGTCAAGAAATTTGACATCTTT
                      ____________________________________________________________
consensus             CAGCAAGGCAATGGGGGTGGTTCTAAGCTGTGGGGTAGGGTCAAGAAATTTGACATCTTT
 
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rJMSF019H23+          CTTTGTGGACCTTATTTCAACCCCACCAACTGCTAAACCAACTCGGCTGGCTCCATACCA
                      ____________________________________________________________
consensus             CTTTGTGGACCTTATTTCAACCCCACCAACTGCTAAACCAACTCGGCTGGCTCCATACCA
 
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rJMSF019H23+          TAAACCTCGGCTCGCTTTGCTCTATACGCTTCCCTCGTGACATCTCACCAATTTAAGACA
                      ____________________________________________________________
consensus             TAAACCTCGGCTCGCTTTGCTCTATACGCTTCCCTCGTGACATCTCACCAATTTAAGACA
 
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rJMSF019H23+          TTCACAATGCATGAGGTGTATCAACGAGTCGGAGACCATGGTACCAATTGGCAACTATCT
                      ____________________________________________________________
consensus             TTCACAATGCATGAGGTGTATCAACGAGTCGGAGACCATGGTACCAATTGGCAACTATCT
 
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rJMSF019H23+          AAGCAAAGGGCATGGAGTTTCAACTAGTTTGCTAGGCAAGAATGATATATAGCCTTATTG
                      ____________________________________________________________
consensus             AAGCAAAGGGCATGGAGTTTCAACTAGTTTGCTAGGCAAGAATGATATATAGCCTTATTG
 
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rJMSF019H23+          TACACTAATAGCCTACAACTGCTTAGTAGCAGACAATATGATGCTTTGCAGACAATTATG
                      ____________________________________________________________
consensus             TACACTAATAGCCTACAACTGCTTAGTAGCAGACAATATGATGCTTTGCAGACAATTATG