Contig 002835:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019E08Sequence312006198 (4)ref|XP_009587205.1|9e-29PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27746002835 (3)ref|XP_010315042.1|1e-57PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27
JMSF037A24Sequence656006198 (4)ref|XP_009587205.1|8e-77PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27663002835 (3)ref|XP_010315042.1|2e-72PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27
JMSF050I02Sequence604006198 (4)ref|XP_009587205.1|2e-72PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27321002835 (3)ref|XP_009777836.1|7e-20PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27

Alignment

This contig is upended


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rJMSF037A24+ C
                      ____________________________________________________________
consensus C
 
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rJMSF037A24+ GATTAAGGGTCATCCATAGAGATCTCAAAGCCAGTAATGTTTTGTTGGATAACAATATGA
                      ____________________________________________________________
consensus GATTAAGGGTCATCCATAGAGATCTCAAAGCCAGTAATGTTTTGTTGGATAACAATATGA
 
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rJMSF037A24+ ATCCTAAGATTCAGACTTTGGGCTGGCAAGAAGTGTTGGAGGGGATGCAACAGAAGCAAA
rJMSF019E08+ GTTGGAGGGGATGCNACAGAAGCAAA
                      ____________________________________________________________
consensus ATCCTAAGATTCAGACTTTGGGCTGGCAAGAAGTGTTGGAGGGGATGCAACAGAAGCAAA
 
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rJMSF037A24+ TGCAAGTCGTATCATGGGGACACATGGATACATATCCCCAGAATATGCTGCTAATGGAAT
rJMSF019E08+ TGCAAGTCGTATCATGGGGACACATGGATACATATCCCCAGAATATGCTGCTAATGGAAT
                      ____________________________________________________________
consensus TGCAAGTCGTATCATGGGGACACATGGATACATATCCCCAGAATATGCTGCTAATGGAAT
 
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rJMSF037A24+ ATTTTCCATAAAATCAGATACATATAGCTTTGGGGTGCTATTGTTGGAGATTGTAGCTGG
rJMSF019E08+ ATTTTCCATAAAATCAGATACATATAGCTTTGGGGTGCTATTGTTGGAGATTGTAGCTGG
                      ____________________________________________________________
consensus ATTTTCCATAAAATCAGATACATATAGCTTTGGGGTGCTATTGTTGGAGATTGTAGCTGG
 
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rJMSF050I02+ AACCTTATTGGCCATGCTTG
rJMSF037A24+ GAAACGAAATAGAGGATTTTCTCACCCAGACCACTGTCTCAACCTTATTGGCCATGCTTG
rJMSF019E08+ GAAACGAAATAGAGGATTTTCTCACCCAGACCACTGTNTCAACCTTATTGGCCATGCTTG
                      ____________________________________________________________
consensus GAAACGAAATAGAGGATTTTCTCACCCAGACCACTGTCTCAACCTTATTGGCCATGCTTG
 
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rJMSF050I02+ GAAGCTGTATAAGCAAAACTTGTCGTTGGAANTAANTGANGNACATCTAGCTCCNTCNTG
rJMSF037A24+ GAAGCTGTATAAGCAAAACTTGTCGTTGGAATTAATTGATGTACATCTAGCTCCATCATG
rJMSF019E08+ GAAGCTGTATAAGCAAAACTTGTCGTTGGAATTAATTGATGTACATCTAGCTCCNTCATG
                      ____________________________________________________________
consensus GAAGCTGTATAAGCAAAACTTGTCGTTGGAATTAATTGATGTACATCTAGCTCCATCATG
 
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rJMSF050I02+ TGNTNTATNTCAAGTTCAAAGANGNATCCNTGTTGGNCTTTTANGNGNGCNGCAACGCCC
rJMSF037A24+ TGATCTATCTCAAGTTCAAAGATGTATCCATGTTGGACTTTTATGTGTGCAGCAACGCCC
rJMSF019E08+ TGATCTATCTCAAGTTCAAAGATGTATCCNTGTTGGACTTTTATGNGTGCAGCAACGCCC
                      ____________________________________________________________
consensus TGATCTATCTCAAGTTCAAAGATGTATCCATGTTGGACTTTTATGTGTGCAGCAACGCCC
 
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rJMSF050I02+ NGATGATAGNCCNACCNTGTNTTATGTTGNAACGATGTTGTNTAATGATAGCNACCTACC
rJMSF037A24+ AGATGATAGACCAACCATGTCTTATGTTGTAACGATGTTGTCTAATGATAGCAACCTACC
rJMSF019E08+ NGATGATAGNCCNACCNTGTCTTATGTTGTAACGATGTTGTCTAATGATAGCAACCTACC
                      ____________________________________________________________
consensus AGATGATAGACCAACCATGTCTTATGTTGTAACGATGTTGTCTAATGATAGCAACCTACC
 
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rJMSF050I02+ TGAAGCAAATGNGCCNGGNTTTTTCNCCGAATCAAAAGNGNTNGAAGCNGNTTNCTNTTC
rJMSF037A24+ TGAAGCAAATGAGCCAGGATTTTTCACCGAATCAAAAGTGATCGAAGCAGATTACTCTTC
rJMSF019E08+ TGAAGCAAATGAGCCNGGATTTTTCNCCGAATCAAAAGTGATCGAAGCNGNTTACTNTTC
                      ____________________________________________________________
consensus TGAAGCAAATGAGCCAGGATTTTTCACCGAATCAAAAGTGATCGAAGCAGATTACTCTTC
 
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rJMSF050I02+ AAGCNCTCAAGGNACAGNTTCNAGAAATGAATGCNCCNTCNCTGCTTTGGNTCCTCGG
rJMSF037A24+ AAGCACTCAAGGAACAGCTTCAAGAAATGAATGCACCATCACTGCTTTGGATCCTCGGTA
rJMSF019E08+ AAGCNCTCAAGGAACAGCTTCAAGAAATGAATGCNCCNTCNCTGCTTTGGATCCTCGGTA
                      ____________________________________________________________
consensus AAGCACTCAAGGAACAGCTTCAAGAAATGAATGCACCATCACTGCTTTGGATCCTCGGTA
 
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rJMSF037A24+ GAGAACAGACAATAAATAAACCGTAGCAAATTAGTTTCCCTTTTAATTTGGTAATGACGT
rJMSF019E08+ GNGAACNGNCNATAAATAAACCGTAGCAAATTAGTTTCCCTTTTAATTTGGTAATGACGT
                      ____________________________________________________________
consensus GAGAACAGACAATAAATAAACCGTAGCAAATTAGTTTCCCTTTTAATTTGGTAATGACGT
 
. : . : . : . : . : . :
rJMSF037A24+ AA
rJMSF019E08+ AATGTCNCTGCTGAAAATTATGAAATTTTCGATCAACTGAAAGTGATNTTAAATCAATTC
                      ____________________________________________________________
consensus AATGTCNCTGCTGAAAATTATGAAATTTTCGATCAACTGAAAGTGATNTTAAATCAATTC
 
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rJMSF019E08+ AAAAGNGAATGCGCTCTTCTGATTGCTTAGTCNGGCTTATGACCCCTCTCNCTATTTAGT
                      ____________________________________________________________
consensus AAAAGNGAATGCGCTCTTCTGATTGCTTAGTCNGGCTTATGACCCCTCTCNCTATTTAGT
 
. : . : . : . : . : . :
rJMSF019E08+ CTATATGCTCCTTAATTTTTTTTATTTTTTTTTTGGTGTAATTTTTATAAGTTGTATGTC
                      ____________________________________________________________
consensus CTATATGCTCCTTAATTTTTTTTATTTTTTTTTTGGTGTAATTTTTATAAGTTGTATGTC