| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004A24 | Sequence | 268 | 004934 (11) | 459 | 002830 (3) | ref|XP_006359395.1| | 3e-21 | PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like | |||
| JMSF018M16 | Sequence | 506 | 009311 (3) | ref|XP_009604383.1| | 1e-66 | PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isofo | 698 | 002830 (3) | ref|XP_006359395.1| | 5e-28 | PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like |
| JMSF021H10 | Sequence | 674 | 009311 (3) | ref|XP_009604383.1| | 1e-60 | PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isofo | 722 | 002830 (3) | ref|XP_006359395.1| | 3e-48 | PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like |
This contig is upended
. : . : . : . : . : . :
rJMSF021H10+ TNGGCTGCTCACCTGACTCTGCTTATTGTTTTTGCTCACTATAGATGGTGCA
____________________________________________________________
consensus TNGGCTGCTCACCTGACTCTGCTTATTGTTTTTGCTCACTATAGATGGTGCA
. : . : . : . : . : . :
rJMSF021H10+ GACATGAAGGAGGACTTTTCGCTTTCTTGCAGTCTAGGATTGTTCAACTGAAGCATAGAA
____________________________________________________________
consensus GACATGAAGGAGGACTTTTCGCTTTCTTGCAGTCTAGGATTGTTCAACTGAAGCATAGAA
. : . : . : . : . : . :
rJMSF021H10+ TAGTAACTTTATTTTCCTTATCTCGTAAACCACTCTCCAGTCAGAACTTAACCCACAAAC
____________________________________________________________
consensus TAGTAACTTTATTTTCCTTATCTCGTAAACCACTCTCCAGTCAGAACTTAACCCACAAAC
. : . : . : . : . : . :
rJMSF021H10+ GTCTTCAACCCGATCATATTGTGAGTACAATGTTTGTTGGGAATTTTATCGGCATCATAT
rJMSF004A24+ ATCGGCATCATAT
rJMSF018M16+ ATATTGTGAGTACAATGTTTGTTGGGAATTTTATCGGCATCATAT
____________________________________________________________
consensus GTCTTCAACCCGATCATATTGTGAGTACAATGTTTGTTGGGAATTTTATCGGCATCATAT
. : . : . : . : . : . :
rJMSF021H10+ GTGCTCGCTCCCTTCATTATCAGTTTTACTCTTGGTACTTTTACAGCATACCATATCTAT
rJMSF004A24+ GTGCTCGCTNCCTTCATTATCAGTTTTACTCTTGGTACTTTTACAGCATACCATATCTAT
rJMSF018M16+ GTGCTCGCTCCCTTCATTATCAGTTTTACTCTTGGTACTTTTACAGCATACCATATCTAT
____________________________________________________________
consensus GTGCTCGCTCCCTTCATTATCAGTTTTACTCTTGGTACTTTTACAGCATACCATATCTAT
. : . : . : . : . : . :
rJMSF021H10+ TGTGGAAAACACCATTCCCTACATTTGTCCGTCTAGTGCTGTTCTTGGTAGTGGAGTTGT
rJMSF004A24+ TGTGGAAAACACCATTCCCTACATTTGTCCGTCTAGTGCTGTTCTTGGTAGTGGAGTTGT
rJMSF018M16+ TGTGGAAAACACCATTCCCTACATTTGTCCGTCTAGTGCTGTTCTTGGTAGTGGAGTTGT
____________________________________________________________
consensus TGTGGAAAACACCATTCCCTACATTTGTCCGTCTAGTGCTGTTCTTGGTAGTGGAGTTGT
. : . : . : . : . : . :
rJMSF021H10+ GCTGGAATGTCTACCCTTCCAACGTATATTCCTCCGTCGTCCTCCTCTCTGCGCATTTAG
rJMSF004A24+ GCTGGAATGTCTACCCTTCCAACGTATATTCCTCCGTCGTCCTCCTCTCTGCGCATTTAG
rJMSF018M16+ GCTGGAATGTCTACCCTTCCAACGTATATTCCTCCGTCGTCCTCCTCTCTGCGCATTTAG
____________________________________________________________
consensus GCTGGAATGTCTACCCTTCCAACGTATATTCCTCCGTCGTCCTCCTCTCTGCGCATTTAG
. : . : . : . : . : . :
rJMSF021H10+ CCATTCTGGGAGGCCTATGGGCTGCTTCACCAGAATATCCGTATGCAGATCAGACAAGCG
rJMSF004A24+ CCATTCTGGGAGGCNTATGGGNTGCTTCACCAGAATATCCGTATGCAGATCAGACAAGCG
rJMSF018M16+ CCATTCTGGGAGGCCTATGGGCTGCTTCACCAGAATATCCGTATGCAGATCAGACAAGCG
____________________________________________________________
consensus CCATTCTGGGAGGCCTATGGGCTGCTTCACCAGAATATCCGTATGCAGATCAGACAAGCG
. : . : . : . : . : . :
rJMSF021H10+ ATAAATCATCAACGTCAAAGAAGAGCAGATGATCAAATTTTGAACGGCTCAGATCACTTT
rJMSF004A24+ ATAAATCATCAACGTCAAAGAAGAGCAGATGATCAAATTTTGAACGGCTCAGATCACTTT
rJMSF018M16+ ATAAATCATCAACGTCAAAGAAGAGCAGATGATCAAATTTTGAACGGCTCAGATCACTTT
____________________________________________________________
consensus ATAAATCATCAACGTCAAAGAAGAGCAGATGATCAAATTTTGAACGGCTCAGATCACTTT
. : . : . : . : . : . :
rJMSF021H10+ CTGGATTAGCATTTCACATCTAACTTATCCCCTGCCTGAAACTCAGTTTCCCACCCCTTC
rJMSF004A24+ CTGGATTAGCATTTCACATCTAACTTATCCCCNGCCTGAAACTCAGTTTCCCACCCCTTC
rJMSF018M16+ CTGGATTAGCATTTCACATCTAACTTATCCCCTGCCTGAAACTCAGTTTCCCACCCCTTC
____________________________________________________________
consensus CTGGATTAGCATTTCACATCTAACTTATCCCCTGCCTGAAACTCAGTTTCCCACCCCTTC
. : . : . : . : . : . :
rJMSF021H10+ CCCCCTCGTGTGACATAGATGGCAGTAAAGCCAAAGACGAAATTTTCCATAATCTTCCAG
rJMSF004A24+ CCCCCTCGTGTGACATAGATGGCAGTAAAGCCAAAGACGAAATTTTCCATAATCTTCCAG
rJMSF018M16+ CCCCCTCGTGTGACATAGATGGCAGTAAAGCCAAAGACGAAATTTTCCATAATCTTCCAG
____________________________________________________________
consensus CCCCCTCGTGTGACATAGATGGCAGTAAAGCCAAAGACGAAATTTTCCATAATCTTCCAG
. : . : . : . : . : . :
rJMSF021H10+ TGCACAGTAGAGTGAAGTTCGACATTTGCTGGTTGACAGTTGACATTATCATTCTTT
rJMSF004A24+ TGCACAGTAGAGTGAAGTTCGACATT
rJMSF018M16+ TGCACAGTAGAGTGAAGTTCGACATTTGCTGGTTGACAGTTGACATTATCATTCTTTTAA
____________________________________________________________
consensus TGCACAGTAGAGTGAAGTTCGACATTTGCTGGTTGACAGTTGACATTATCATTCTTTTAA
. : . : . : . : . : . :
rJMSF018M16+ AAGAGAAAGTTGTCACATTTTAAAATTTTCNTTATATTTTATGTAGTGTAGTTGATGAAG
____________________________________________________________
consensus AAGAGAAAGTTGTCACATTTTAAAATTTTCNTTATATTTTATGTAGTGTAGTTGATGAAG