Contig 002823:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017O17Sequence284002823 (2)gb|EYU44217.1|3e-04hypothetical protein MIMGU_mgv11b020204mg [Erythranthe guttata]452002823 (2)ref|XP_010660588.1|6e-09PREDICTED: protein RALF-like 27 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017O17- AGAATTAACAGGATTATATATATTATATTATA
                      ____________________________________________________________
consensus AGAATTAACAGGATTATATATATTATATTATA
 
. : . : . : . : . : . :
rJMSF017O17- TAGCTACTTCAACATTCATCAATTATACAAGAGAGCTACTTCACACACGATTTATTGTAA
                      ____________________________________________________________
consensus TAGCTACTTCAACATTCATCAATTATACAAGAGAGCTACTTCACACACGATTTATTGTAA
 
. : . : . : . : . : . :
rJMSF017O17- TAGTTGCAGTGCATCTTGACGCCTACTTTGTCCGCTAAGCAACTCCCGGATCTGTCGGCA
                      ____________________________________________________________
consensus TAGTTGCAGTGCATCTTGACGCCTACTTTGTCCGCTAAGCAACTCCCGGATCTGTCGGCA
 
. : . : . : . : . : . :
JMSF017O17+ TCTGCAACGGACCGTAACCTAGCCGCCCCTTTTCTCCATCAAGA
rJMSF017O17- TTACATAAAGCAGGTTTCTGCAACGGACCGTAACCTAGCCGCCCCTTTTCTCCATCAAGA
                      ____________________________________________________________
consensus TTACATAAAGCAGGTTTCTGCAACGGACCGTAACCTAGCCGCCCCTTTTCTCCATCAAGA
 
. : . : . : . : . : . :
JMSF017O17+ ACCCTTTTGGTAGTCTCGGAATCCATGAGAAACTCCTCCCCACCGGTTTCCATGCAATCA
rJMSF017O17- ACCCTTTTGGTAGTCTCGGAATCCATGAGAAACTCCTCCCCACCGGTTTCCATGCAATCA
                      ____________________________________________________________
consensus ACCCTTTTGGTAGTCTCGGAATCCATGAGAAACTCCTCCCCACCGGTTTCCATGCAATCA
 
. : . : . : . : . : . :
JMSF017O17+ CCCACCGTGCCGCCGCCGCCTCTGCATTCTGCGCCGGCGGCGGTTGCGCTGAGTTGTGTG
rJMSF017O17- CCCACCGTGCCGCCGCCGCCTCTGCATTCTGCGCCGGCGGCGGTTGCGCTGAGTTGTGTG
                      ____________________________________________________________
consensus CCCACCGTGCCGCCGCCGCCTCTGCATTCTGCGCCGGCGGCGGTTGCGCTGAGTTGTGTG
 
. : . : . : . : . : . :
JMSF017O17+ GTGATGAAAAGATGAGTGATCAAGAGTGGTAGGACCCCAATGTTGCAGAAACTACGTGCC
rJMSF017O17- GTGATGAAAAGATGAGTGATCAAGAGTGGTAGGACCCCAATGTTGCAGAAACTACGTGCC
                      ____________________________________________________________
consensus GTGATGAAAAGATGAGTGATCAAGAGTGGTAGGACCCCAATGTTGCAGAAACTACGTGCC
 
. : . : . : . : . : . :
JMSF017O17+ ATATATATTCACTTCACTTCTACTTTTTATTTTCCCTATCGAATTTGGCAGAGAAATGCA
rJMSF017O17- ATATATATTCACTTCACTTCTACTTTTTATTTTCCCTATCGAATTTGGCAGAGAAATGCA
                      ____________________________________________________________
consensus ATATATATTCACTTCACTTCTACTTTTTATTTTCCCTATCGAATTTGGCAGAGAAATGCA