Contig 002821:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF053K01+                                                                AACNGA
                      ____________________________________________________________
consensus                                                                   AACNGA
 
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rJMSF053K01+          CAAATTACTTACTGGAGTTGATCAAACCTGCATTGATCCTTTTCTGGGCATGATCATGAT
                      ____________________________________________________________
consensus             CAAATTACTTACTGGAGTTGATCAAACCTGCATTGATCCTTTTCTGGGCATGATCATGAT
 
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rJMSF053K01+          CAATGTACAGTGGTTCACACAACGAAGTATGGTGCTGTAAAAGAGGTAGTACTTCTTACT
                      ____________________________________________________________
consensus             CAATGTACAGTGGTTCACACAACGAAGTATGGTGCTGTAAAAGAGGTAGTACTTCTTACT
 
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rJMSF053K01+          GATTTGTGTCATTGAAATTTTTTATCAACATGATGATGTTTGATAAATAACTTTCTGCAG
rJMSF017K15+                                                                    AG
                      ____________________________________________________________
consensus             GATTTGTGTCATTGAAATTTTTTATCAACATGATGATGTTTGATAAATAACTTTCTGCAG
 
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rJMSF053K01+          CATACTCTAGGGACCATAAGCTGGCAGCAGGGAAATTTGTTTCCCTCTTTTATGTTGTTA
rJMSF017K15+          CATACTCTAGGGACCATAAGCTNGCAGCAGGGAAATTTGTTTCCCTCTTTTATGNTGTTA
                      ____________________________________________________________
consensus             CATACTCTAGGGACCATAAGCTGGCAGCAGGGAAATTTGTTTCCCTCTTTTATGTTGTTA
 
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rJMSF053K01+          TCTGTTAGTAACCTTACCTCGTCAGATGGATCTAAACCAGCAGATGCAATCTCCACTACA
rJMSF017K15+          TCTGTTAGTAACCTTACCTCGTCAGATGGATCTAAACCAGCAGATGCAATCTCCACTACA
                      ____________________________________________________________
consensus             TCTGTTAGTAACCTTACCTCGTCAGATGGATCTAAACCAGCAGATGCAATCTCCACTACA
 
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rJMSF053K01+          CTCTGCTTTCTTCCTGTTCAAACGTTCATTTATATATGGTATCTTCTGCTGTTGATCATG
rJMSF017K15+          CTCTGCTTTCTTCCTGTTCAAACGTTCATTTATATATGGTATCTTCTGCTGTTGATCATG
                      ____________________________________________________________
consensus             CTCTGCTTTCTTCCTGTTCAAACGTTCATTTATATATGGTATCTTCTGCTGTTGATCATG
 
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rJMSF053K01+          ACTGTTCTTATTGTCCTCTTCTGGCCAACATATGGGTTGCCTTTCTTGCACCACCTTAGT
rJMSF017K15+          ACTGTTCTTATTGTCCTCTTCTGGCCAACATATGGGTTGCCTTTCTTGCACCACCTTAGT
                      ____________________________________________________________
consensus             ACTGTTCTTATTGTCCTCTTCTGGCCAACATATGGGTTGCCTTTCTTGCACCACCTTAGT
 
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rJMSF053K01+          GAATACACGAGAAGTCTAATTAGTTTGAGCATGTTTGGGGGTGGGGTTAAGGAGAAAAAT
rJMSF017K15+          GAATACACGAGAAGTCTAATTAGTTTGAGCATGTTTGGGGGTGGGGTTAAGGAGAAAAAT
                      ____________________________________________________________
consensus             GAATACACGAGAAGTCTAATTAGTTTGAGCATGTTTGGGGGTGGGGTTAAGGAGAAAAAT
 
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rJMSF053K01+          GATGATGAAATATGTGAGTATGAGGAGGTTTGGGATGCTGAAGGGACAATGCACCTCATA
rJMSF017K15+          GATGATGAAATATGTGAGTATGAGGAGGTTTGGGATGCTGAAGGGACAATGCACCTCATA
                      ____________________________________________________________
consensus             GATGATGAAATATGTGAGTATGAGGAGGTTTGGGATGCTGAAGGGACAATGCACCTCATA
 
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rJMSF053K01+          AGGAAAACCTCTAAGGCTCGTCCTACATACTCTAGTGAGTCTTCCTCGGAAAGAGGTAAT
rJMSF017K15+          AGGAAAACCTCTAAGGCTCGTCCTACATACTCTAGTGAGTCTTCCTCGGAAAGAGGTAAT
                      ____________________________________________________________
consensus             AGGAAAACCTCTAAGGCTCGTCCTACATACTCTAGTGAGTCTTCCTCGGAAAGAGGTAAT
 
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rJMSF053K01+          GCTGTCATGCGTTCAGCTGCCAGAAAACAAAATGTAGAGATAGATATCACAATGCCTGCA
rJMSF017K15+          GCTGTCATGCGTTCAGCTGCCAGAAAACAAAATGTAGAGATAGATATCACAATGCCTGCA
                      ____________________________________________________________
consensus             GCTGTCATGCGTTCAGCTGCCAGAAAACAAAATGTAGAGATAGATATCACAATGCCTGCA
 
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rJMSF053K01+          GATGCGGTGAAATTACCATCTCGGGCAAACAAATCAAAGATGAAGTTGGTGATCAGGCAA
rJMSF017K15+          GATGCGGTGAAATTACCATCTCGGGCAAACAAATCAAAGATGAAGTTGGTGATCAGGCAA
                      ____________________________________________________________
consensus             GATGCGGTGAAATTACCATCTCGGGCAAACAAATCAAAGATGAAGTTGGTGATCAGGCAA
 
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rJMSF053K01+          CTATTGAGGGTATTTCGTACAATCTTTATAATTGCTGCCTTTAATGTCCCGCTATACATG
rJMSF017K15+          CTATTGAGGGTATTTCGTACAATCTTTATAATTGCTGCCTTTAATGTCCCGCTATACATG
                      ____________________________________________________________
consensus             CTATTGAGGGTATTTCGTACAATCTTTATAATTGCTGCCTTTAATGTCCCGCTATACATG
 
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rJMSF053K01+          ATGCTGCTGTTCAAAGACTGGATCGACAAATGACACACGAGAAAGATGGTGCAGTTAATA
rJMSF017K15+          ATGCTGCTGTTCAAAGACTGGATCGACAAATGACACACGAGAAAGATGGTGCAGTTAATA
                      ____________________________________________________________
consensus             ATGCTGCTGTTCAAAGACTGGATCGACAAATGACACACGAGAAAGATGGTGCAGTTAATA
 
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rJMSF053K01+          TCAGGTGAGGCAAGTTTGAGCATAGCTTTGGTGAATGTCACCTGTTAATGATGTAATAGT
rJMSF017K15+          TCAGGTGAGGCAAGTTTGAGCATAGCTTTGGTGAATGTCACCTGTTAATGTTGTAATAGT
                      ____________________________________________________________
consensus             TCAGGTGAGGCAAGTTTGAGCATAGCTTTGGTGAATGTCACCTGTTAATGTTGTAATAGT
 
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rJMSF053K01+          CATGACCTGGTAATTGTTTGTGACAGTCCAACCAAAAATGAAAG                
rJMSF017K15+          CATGA-CTGGTAATTGTTTGTGACAGTCCAACCAAAAATGAAAGTGAAAGGTGTAAGAGG
                      ____________________________________________________________
consensus             CATGACCTGGTAATTGTTTGTGACAGTCCAACCAAAAATGAAAGTGAAAGGTGTAAGAGG