Contig 002820:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001E11Sequence388009186 (3)722002820 (3)ref|XP_009615032.1|139PREDICTED: uncharacterized protein LOC104107830 [Nicotiana tomentosiformis]
JMSF017J09Sequence572015722ref|XP_009765193.1|3e-37PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Nicotiana syl740002820 (3)ref|XP_009615032.1|144PREDICTED: uncharacterized protein LOC104107830 [Nicotiana tomentosiformis]
JMSF037I15Sequence682009186 (3)725002820 (3)ref|XP_009615032.1|146PREDICTED: uncharacterized protein LOC104107830 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF001E11+                                                                 TTTTG
rJMSF037I15+                                           GTCTTTGGAATCGAAACTCAGTTTTTG
rJMSF017J09+                                                                 TTTTG
                      ____________________________________________________________
consensus                                              GTCTTTGGAATCGAAACTCAGTTTTTG
 
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rJMSF001E11+          CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
rJMSF037I15+          CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
rJMSF017J09+          CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
                      ____________________________________________________________
consensus             CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
 
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rJMSF001E11+          TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
rJMSF037I15+          TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
rJMSF017J09+          TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
                      ____________________________________________________________
consensus             TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
 
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rJMSF001E11+          GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
rJMSF037I15+          GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
rJMSF017J09+          GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
                      ____________________________________________________________
consensus             GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
 
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rJMSF001E11+          CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
rJMSF037I15+          CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
rJMSF017J09+          CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
                      ____________________________________________________________
consensus             CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
 
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rJMSF001E11+          TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
rJMSF037I15+          TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
rJMSF017J09+          TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
                      ____________________________________________________________
consensus             TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
 
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rJMSF001E11+          TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
rJMSF037I15+          TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
rJMSF017J09+          TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
                      ____________________________________________________________
consensus             TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
 
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rJMSF001E11+          TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
rJMSF037I15+          TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
rJMSF017J09+          TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
                      ____________________________________________________________
consensus             TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
 
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rJMSF001E11+          AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
rJMSF037I15+          AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
rJMSF017J09+          AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
                      ____________________________________________________________
consensus             AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
 
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rJMSF001E11+          TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
rJMSF037I15+          TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
rJMSF017J09+          TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
                      ____________________________________________________________
consensus             TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
 
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rJMSF001E11+          GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
rJMSF037I15+          GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
rJMSF017J09+          GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
                      ____________________________________________________________
consensus             GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
 
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rJMSF001E11+          TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
rJMSF037I15+          TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
rJMSF017J09+          TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
                      ____________________________________________________________
consensus             TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
 
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rJMSF001E11+          ATTTCTATTTGCATTAC                                           
rJMSF037I15+          ATTTCTATTTGCATTAC                                           
rJMSF017J09+          ATTTCTATTTGCATTACATGGTTTTGTTAAAGCTATTTTACTAGCATCATGATTGATCCA
                      ____________________________________________________________
consensus             ATTTCTATTTGCATTACATGGTTTTGTTAAAGCTATTTTACTAGCATCATGATTGATCCA