Contig 002816:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043P14+                                                              TTTATAGA
                      ____________________________________________________________
consensus                                                                 TTTATAGA
 
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rJMSF043P14+          AACAACCATTTTTTTTTGGAAAAGNTAATGATCTATAATCATTAAAATAACTTTACATTT
rJMSF016L09+                                           TATAATCATTAAAATAACTTTNCATTT
                      ____________________________________________________________
consensus             AACAACCATTTTTTTTTGGAAAAGNTAATGATCTATAATCATTAAAATAACTTTACATTT
 
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rJMSF043P14+          TTAACTGGGAAATCCAGATTTTCAG-TTGATTTGTATGTAAATGATTTTTTTTTTAATAT
rJMSF016L09+          TTAACTGGGAAATCCAGATTTTCAGCTTGATTTGTATGTAAATGA-TTTTTTTTTAATAT
                      ____________________________________________________________
consensus             TTAACTGGGAAATCCAGATTTTCAGCTTGATTTGTATGTAAATGATTTTTTTTTTAATAT
 
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rJMSF043P14+          ATTTACTAACATTTTTATTTAAGGGTTTGGCAAATGATGAATTGGTTATGTCTGATGCCC
rJMSF016L09+          ATTTACTAACATTTTTATTTAAGGGTTTGGCAANTGATGAATTGGNTATGTCTGATGCCC
                      ____________________________________________________________
consensus             ATTTACTAACATTTTTATTTAAGGGTTTGGCAAATGATGAATTGGTTATGTCTGATGCCC
 
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rJMSF043P14+          TTTTGTAGTGAAATCATTGAGTTGTCATTAAAAGGATTACATTTAGCAACTTTCCCACTT
rJMSF016L09+          TTTTGTAGTGAAATCATNGAGTTGTCATTAAAAGGATTACATTTAGCAACTTTCCCACTT
                      ____________________________________________________________
consensus             TTTTGTAGTGAAATCATTGAGTTGTCATTAAAAGGATTACATTTAGCAACTTTCCCACTT
 
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rJMSF043P14+          TTGTTCTTTATATGAGGATGATGTCCTCCTTCTGCCTGCAAATGAAGACACATAAAATCA
rJMSF016L09+          TTGTTCTTTATATGAGGATGATGTCCTCCTTCTGCCTGCAAATGAAGACACATAAAATCA
                      ____________________________________________________________
consensus             TTGTTCTTTATATGAGGATGATGTCCTCCTTCTGCCTGCAAATGAAGACACATAAAATCA
 
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rJMSF043P14+          GATGCTGCTTTTTGATTGAGTGGTTTAACAGAGTTTTGGATTATTTCCATTCTTAAGATG
rJMSF016L09+          GATGCTGCTTTTTGATTGAGTGGTTTAACAGAGTTTTGGATTATTTCCATTCTTAAGATG
                      ____________________________________________________________
consensus             GATGCTGCTTTTTGATTGAGTGGTTTAACAGAGTTTTGGATTATTTCCATTCTTAAGATG
 
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rJMSF043P14+          CTTCAGATGTGATGCCAAAAAGTGTTGCAGTTAAATGATGACCTGGAAAGTCTGATGCCA
rJMSF016L09+          CTTCAGATGTGATGCCAAAAAGTGTTGCAGTTAAATGATGACCTGGAAAGTCTGATGCCA
                      ____________________________________________________________
consensus             CTTCAGATGTGATGCCAAAAAGTGTTGCAGTTAAATGATGACCTGGAAAGTCTGATGCCA
 
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rJMSF043P14+          AATTTGCTGTTTCATTATATAAATTATTATATGTTTAGTTTAGTAATTTCATCTCAAAGT
rJMSF016L09+          AATTTGCTGTTTCATTATATAAATTATTATATGTTTAGTTTAGTAATTTCATCTCAAAGT
                      ____________________________________________________________
consensus             AATTTGCTGTTTCATTATATAAATTATTATATGTTTAGTTTAGTAATTTCATCTCAAAGT
 
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rJMSF043P14+          TCTGATTGTACACATGAGTTACTTTGATA-GGCAAATGATGATATATAAAATCTGATGCC
rJMSF016L09+          TCTGATTGTACACATGAGTTACTTTGATACGGCAAATGATGANATATAAAATCTGATGCC
                      ____________________________________________________________
consensus             TCTGATTGTACACATGAGTTACTTTGATACGGCAAATGATGATATATAAAATCTGATGCC
 
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rJMSF043P14+          AAAATTACTTTGAATNTCAAAAAT                                    
rJMSF016L09+          AAAATTACTTTGAATTTCAAAAATGTAGTTGAGTCATTTGAGTCATATGATAGTAAAGGA
                      ____________________________________________________________
consensus             AAAATTACTTTGAATTTCAAAAATGTAGTTGAGTCATTTGAGTCATATGATAGTAAAGGA
 
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rJMSF016L09+          CTGNTTGTACATAGCCGTTNNTTGCCAGACCNGACGATATNCTCAATCGATGCANAATAG
                      ____________________________________________________________
consensus             CTGNTTGTACATAGCCGTTNNTTGCCAGACCNGACGATATNCTCAATCGATGCANAATAG