| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF006O21 | Sequence | 262 | 002815 (6) | 363 | 000833 (20) | ref|XP_009617920.1| | 96.3 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | |||
| JMSF016K19 | Sequence | 404 | 002815 (6) | 733 | 002815 (6) | gb|EPS57400.1| | 3e-77 | hypothetical protein M569_17418, partial [Genlisea aurea] | |||
| JMSF033D12 | Sequence | 645 | 016823 | 754 | 002815 (6) | gb|EPS57400.1| | 4e-77 | hypothetical protein M569_17418, partial [Genlisea aurea] | |||
| JMSF046H09 | Sequence | 756 | 002815 (6) | emb|CDP05387.1| | 2e-73 | unnamed protein product [Coffea canephora] | 827 | 002815 (6) | ref|XP_002511020.1| | 3e-92 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
This contig is upended
. : . : . : . : . : . :
JMSF016K19- GGAACTCTTTTATTCTTCCAATCTACTTTCACGACCTCTTTCGTAACACAGTTTCGAC
JMSF006O21- GGAACTCTTTTATTCTTCCAATCTACTTTCACGACCTCTTTCGTAACACAGTTTCGAC
JMSF046H09- AACTCTTTTATTCTTCCAATCTACTTTCACGACCTCTTTCGTAACACAGTTTCGAC
____________________________________________________________
consensus GGAACTCTTTTATTCTTCCAATCTACTTTCACGACCTCTTTCGTAACACAGTTTCGAC
. : . : . : . : . : . :
JMSF016K19- GACGATCAAGATTCCGACAACGATCTCCGGCTGTCGGGAGCGTTTCATTCCGGCGCCTTC
JMSF006O21- GACGATCAAGATTCCGACAACGATCTCCGGCTGTCGGGAGCGTTTCATTCCGGCGCCTTC
JMSF046H09- GACGATCAAGATTCCGACAACGATCTCCGGCTGTCGGGAGCGTTTCATTCCGGCGCCTTC
____________________________________________________________
consensus GACGATCAAGATTCCGACAACGATCTCCGGCTGTCGGGAGCGTTTCATTCCGGCGCCTTC
. : . : . : . : . : . :
JMSF016K19- ACTGTTGGATCAGCAGACTTCATCATGAATCCCGAATA
JMSF006O21- ACTGTTGGATCAGCAGACTTCATCATGAATCCCGAATAGTAATCTCCTGATCTCAGTTTC
JMSF046H09- ACTGTTGGATCAGCAGACTTCATCATGAATCCCGAATAGTAATCTCCTGATCTCAGTTTC
____________________________________________________________
consensus ACTGTTGGATCAGCAGACTTCATCATGAATCCCGAATAGTAATCTCCTGATCTCAGTTTC
. : . : . : . : . : . :
JMSF006O21- CTTCGCAAATTTTGTAGAATCTAGGGTTCGTATAGCATTTGCTCTATAATTTTAGCTTGG
JMSF046H09- CTTCGCAAATTTTGTAGAATCTAGGGTTCGTATAGCATTTGCTCTATAATTTTAGCTTGG
____________________________________________________________
consensus CTTCGCAAATTTTGTAGAATCTAGGGTTCGTATAGCATTTGCTCTATAATTTTAGCTTGG
. : . : . : . : . : . :
JMSF006O21- TTCTGCCTGATCTGATATCGGTTT
JMSF046H09- TTCTGCCTGATCTGATATCGGTTTCACGACCAACGTGACTACTTGTTCAAGCTTTTGCTT
____________________________________________________________
consensus TTCTGCCTGATCTGATATCGGTTTCACGACCAACGTGACTACTTGTTCAAGCTTTTGCTT
. : . : . : . : . : . :
JMSF046H09- ATAGGAGATTCAGGTGTTGGAAAGTCATGCCTGCTTCTGAGGTTTGCTGATGATTCATAT
rJMSF046H09+ GTGTTGGAAAGTCATGCCTGCTTTTGAGGTTTGCTGATGATTCATAT
____________________________________________________________
consensus ATAGGAGATTCAGGTGTTGGAAAGTCATGCCTGCTTTTGAGGTTTGCTGATGATTCATAT
. : . : . : . : . : . :
JMSF046H09- TTGGACAGTTACATTAGCACAATTGGTGTTGACTTTAAAATTCGCACTGTGGACCAAGAT
rJMSF046H09+ TTGGACAGTTACATTAGCACAATTGGTGTTGACTTTAAAATTCGCACTGTGGACCAAGAT
____________________________________________________________
consensus TTGGACAGTTACATTAGCACAATTGGTGTTGACTTTAAAATTCGCACTGTGGACCAAGAT
. : . : . : . : . : . :
JMSF046H09- GGGAAGACAATTAAACTTCAAATTGTACGAGTTTTCCAGTCTTTGCTTTTAAATTTTAAC
rJMSF046H09+ GGGAAGACAATTAAACTTCAAATTGTACGAGTTTTCCAGTCTTTGCTTTTAAATTTTAAC
____________________________________________________________
consensus GGGAAGACAATTAAACTTCAAATTGTACGAGTTTTCCAGTCTTTGCTTTTAAATTTTAAC
. : . : . : . : . : . :
JMSF046H09- GGTGGGACACTGCTGGGCAAGAACGCTTCCGGACAATTACCAGTAGTTACTACCGAGGAG
rJMSF046H09+ GGTGGGACACTGCTGGGCAAGAACGCTTCCGGACAATTACCAGTAGTTACTACCGAGGAG
rJMSF033D12+ TGGGACACTGCTGGGCAAGAACGCTTCCGGACAATTACCAGTAGTTACTACCGAGGAG
rJMSF016K19+ GTGGGACACTGCTGGGCAAGAACGCTTCCGGACAATTACCAGTAGTTACTACCGAGGAG
____________________________________________________________
consensus GGTGGGACACTGCTGGGCAAGAACGCTTCCGGACAATTACCAGTAGTTACTACCGAGGAG
. : . : . : . : . : . :
JMSF046H09- CACATGGCATTATAATAGTTTATGACATAACTGATCAAGAAAGCTTCAATAATGTTAAGC
rJMSF046H09+ CACATGGCATTATAATAGTTTATGACATAACTGATCAAGAAAGCTTCAATAATGTTAAGC
rJMSF033D12+ CACATGGCATTATAATAGTTTATGACATAACTGATCAAGAAAGCTTCAATAATGTTAAGC
rJMSF016K19+ CACATGGCATTATAATAGTTTATGACATAACTGATCAAGAAAGCTTCAATAATGTTAAGC
____________________________________________________________
consensus CACATGGCATTATAATAGTTTATGACATAACTGATCAAGAAAGCTTCAATAATGTTAAGC
. : . : . : . : . : . :
JMSF046H09- AATGGTTGAATGAAATTGATCGCTATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGAA
rJMSF046H09+ AATGGTTGAATGAAATTGATCGCTATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGAA
rJMSF033D12+ AATGGTTGAATGAAATTGATCGCTATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGAA
rJMSF016K19+ AATGGTTGAATGAAATTGATCGCTATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGAA
____________________________________________________________
consensus AATGGTTGAATGAAATTGATCGCTATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGAA
. : . : . : . : . : . :
JMSF046H09- ATAAGTCTGATCTGACAGACAACCGGGCTGTGTCCTATGATACTGCTAAGGCCTTTGCTG
rJMSF046H09+ ATAAGTCTGATCTGACAGACAACCGGGCTGTGTCCTATGATACTGCTAAGGCCTTTGCTG
rJMSF033D12+ ATAAGTCTGATCTGACAGACAACCGGGCTGTGTCCTATGATACTGCTAAGGCCTTTGCTG
rJMSF016K19+ ATAAGTCTGATCTGACAGACAACCGGGCTGTGTCCTATGATACTGCTAAGGCCTTTGCTG
____________________________________________________________
consensus ATAAGTCTGATCTGACAGACAACCGGGCTGTGTCCTATGATACTGCTAAGGCCTTTGCTG
. : . : . : . : . : . :
JMSF046H09- ATGAAATTGGCATTCCATTCATGGAGACCAGTGCAAAG
rJMSF046H09+ ATGAAATTGGCATTCCATTCATGGAGACCAGTGCAAAGAATGCCAGTAATGTTGAACAAG
rJMSF033D12+ ATGAAATTGGCATTCCATTCATGGAGACCAGTGCAAAGAATGCCAGTAATGTTGAACAAG
rJMSF016K19+ ATGAAATTGGCATTCCATTCATGGAGACCAGTGCAAAGAATGCCAGTAATGTTGAACAAG
____________________________________________________________
consensus ATGAAATTGGCATTCCATTCATGGAGACCAGTGCAAAGAATGCCAGTAATGTTGAACAAG
. : . : . : . : . : . :
rJMSF046H09+ CTTTCATGGCAATGTCAGCTGATATAAAGAAGAGGATGGCAAGCCAACCAGCGGGGAGCA
rJMSF033D12+ CTTTCATGGCAATGTCAGCTGATATAAAGAAGAGGATGGCAAGCCAACCAGCGGGGAGCA
rJMSF016K19+ CTTTCATGGCAATGTCAGCTGATATAAAGAAGAGGATGGCAAGCCAACCAGCGGGGAGCA
____________________________________________________________
consensus CTTTCATGGCAATGTCAGCTGATATAAAGAAGAGGATGGCAAGCCAACCAGCGGGGAGCA
. : . : . : . : . : . :
rJMSF046H09+ ATGCCAAGCCACCAACAGTGCAGATTCGAGGACAGCCCGTTAACCAGAAGGGTGGCTGCT
rJMSF033D12+ ATGCCAAG-CACCAACAGTGCAGATTCGAGGACAGCCCGTTAACCAGAAGGGTGGCTGCT
rJMSF016K19+ ATGCCAAG-CACCAACAGTGCAGATTCGAGGACAGCCCGTTAACCAGAAGGGTGGCTGCT
____________________________________________________________
consensus ATGCCAAG-CACCAACAGTGCAGATTCGAGGACAGCCCGTTAACCAGAAGGGTGGCTGCT
. : . : . : . : . : . :
rJMSF046H09+ GCTCTTCTTAGGCATTATGCTAGGCCCTGCATAGACTATACTGGGTTTAGAGCCTTCTCA
rJMSF033D12+ GCTCTTCTTAGGCATTATGCTAGGCCCTGCATAGACTATACTGGGTTTAGAGCCTTCTCA
rJMSF016K19+ GCTCTTCTTAGGCATTATGCTAGGCCCTGCATAGACTATACTGGGTTTAGAGCCTTCTCA
____________________________________________________________
consensus GCTCTTCTTAGGCATTATGCTAGGCCCTGCATAGACTATACTGGGTTTAGAGCCTTCTCA
. : . : . : . : . : . :
rJMSF046H09+ AATTACAGAGTGCAAATTATACAGGGTGGGGTTTACTTTAAGGATGATGTTGCATCAGAA
rJMSF033D12+ AATTACAGAGTGCAAATTATACAGGGTGGGGTTTACTTTAAGGATGATGTTGCATCAGAA
rJMSF016K19+ AATTACAGAGTGCAAATTATACAGGGTGGGGTTTACTTTAAGGATGATGTTGCATCAGAA
____________________________________________________________
consensus AATTACAGAGTGCAAATTATACAGGGTGGGGTTTACTTTAAGGATGATGTTGCATCAGAA
. : . : . : . : . : . :
rJMSF046H09+ GGAAGTCATTATTAGACTTTTACTTAGTAGCTTATTAACTTTTGTTGTTAGTGATTTGAA
rJMSF033D12+ GGAAGTCATTATTAGACTTTTACTTAGTAGCTTATTAACTTTTGTTGTTAGTGATTTGAA
rJMSF016K19+ GGAAGTCATTATTAGACTTTTACTTAGTAGCTTATTAACTTTTGTTGTTAGTGATTTGAA
____________________________________________________________
consensus GGAAGTCATTATTAGACTTTTACTTAGTAGCTTATTAACTTTTGTTGTTAGTGATTTGAA
. : . : . : . : . : . :
rJMSF046H09+ TGCTTGGATAATCGAAGAACCAAAAAGCCTAAAGCATTGTGAAGAATTGCAACTTGCTCT
rJMSF033D12+ TGCTTGGATAATCGAAGAACCAAAAAGCCTAAAGCATTGTGAAGAATTGCAACTTGCTCT
rJMSF016K19+ TGCTTGGATAATCGAAGAACCAAAAAGCCTAAAGCATTGTGAAGAATTGCAACTTGCTCT
____________________________________________________________
consensus TGCTTGGATAATCGAAGAACCAAAAAGCCTAAAGCATTGTGAAGAATTGCAACTTGCTCT