Contig 002810:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016B07Sequence422003719 (5)ref|XP_009364543.1|1e-32PREDICTED: probable serine/threonine-protein kinase WNK9 isoform X2 [Pyrus x br775002810 (3)ref|XP_004230120.1|1e-20PREDICTED: probable serine/threonine-protein kinase WNK9 [Solanum lycopersicum]
JMSF027J05Sequence632003719 (5)ref|XP_008389007.1|1e-109PREDICTED: serine/threonine-protein kinase WNK1-like [Malus domestica]727002810 (3)ref|XP_004230120.1|5e-21PREDICTED: probable serine/threonine-protein kinase WNK9 [Solanum lycopersicum]
JMSF029C02Sequence645003719 (5)ref|XP_008389007.1|7e-75PREDICTED: serine/threonine-protein kinase WNK1-like [Malus domestica]725002810 (3)ref|XP_004230120.1|1e-13PREDICTED: probable serine/threonine-protein kinase WNK9 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027J05+ AGTGCAGTAGTTGTGCCACACATGGCCGGTTCGAGGAGATTACGTATCAAACAAA
rJMSF029C02+ CAGTGCAGTAGTTGTGCCACACATGGCCCGTTCGAGGAGATTACGTATCAAACAAA
rJMSF016B07+ AGTGCAGTAGTTGTGCCACACATGGCCGGTTCGAGGAGATTACGTATCAAACAAA
                      ____________________________________________________________
consensus CAGTGCAGTAGTTGTGCCACACATGGCCGGTTCGAGGAGATTACGTATCAAACAAA
 
. : . : . : . : . : . :
rJMSF027J05+ TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
rJMSF029C02+ TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
rJMSF016B07+ TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
                      ____________________________________________________________
consensus TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
 
. : . : . : . : . : . :
rJMSF027J05+ TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCAGTGTG
rJMSF029C02+ TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCA--GTG
rJMSF016B07+ TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCAGTGTG
                      ____________________________________________________________
consensus TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCAGTGTG
 
. : . : . : . : . : . :
rJMSF027J05+ CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
rJMSF029C02+ CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
rJMSF016B07+ CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
                      ____________________________________________________________
consensus CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
 
. : . : . : . : . : . :
rJMSF027J05+ AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
rJMSF029C02+ AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
rJMSF016B07+ AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
                      ____________________________________________________________
consensus AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
 
. : . : . : . : . : . :
rJMSF027J05+ TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
rJMSF029C02+ TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
rJMSF016B07+ TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
                      ____________________________________________________________
consensus TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
 
. : . : . : . : . : . :
rJMSF027J05+ ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
rJMSF029C02+ ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
rJMSF016B07+ ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
                      ____________________________________________________________
consensus ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
 
. : . : . : . : . : . :
rJMSF027J05+ CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
rJMSF029C02+ CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
rJMSF016B07+ CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
                      ____________________________________________________________
consensus CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
 
. : . : . : . : . : . :
rJMSF027J05+ TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTGTTTGTTTATAATGTTT
rJMSF029C02+ TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTATTTGTTTATAATGTTT
rJMSF016B07+ TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTGTTTGTTCATAATGTTT
                      ____________________________________________________________
consensus TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTGTTTGTTTATAATGTTT
 
. : . : . : . : . : . :
rJMSF027J05+ TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
rJMSF029C02+ TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
rJMSF016B07+ TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
                      ____________________________________________________________
consensus TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
 
. : . : . : . : . : . :
rJMSF027J05+ GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
rJMSF029C02+ GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
rJMSF016B07+ GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
                      ____________________________________________________________
consensus GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
 
. : . : . : . : . : . :
rJMSF027J05+ ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
rJMSF029C02+ ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
rJMSF016B07+ ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
                      ____________________________________________________________
consensus ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
 
. : . : . : . : . : . :
rJMSF027J05+ CCAAGAGAAAT
rJMSF029C02+ CCAAGAGAAAT
rJMSF016B07+ CCAAGAGAAATGTAATTATTAAGGCTTAGGATTCCCTTATGGGATACCTTCTTGTTCCCA
                      ____________________________________________________________
consensus CCAAGAGAAATGTAATTATTAAGGCTTAGGATTCCCTTATGGGATACCTTCTTGTTCCCA