| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF016B07 | Sequence | 422 | 003719 (5) | ref|XP_009364543.1| | 1e-32 | PREDICTED: probable serine/threonine-protein kinase WNK9 isoform X2 [Pyrus x br | 775 | 002810 (3) | ref|XP_004230120.1| | 1e-20 | PREDICTED: probable serine/threonine-protein kinase WNK9 [Solanum lycopersicum] |
| JMSF027J05 | Sequence | 632 | 003719 (5) | ref|XP_008389007.1| | 1e-109 | PREDICTED: serine/threonine-protein kinase WNK1-like [Malus domestica] | 727 | 002810 (3) | ref|XP_004230120.1| | 5e-21 | PREDICTED: probable serine/threonine-protein kinase WNK9 [Solanum lycopersicum] |
| JMSF029C02 | Sequence | 645 | 003719 (5) | ref|XP_008389007.1| | 7e-75 | PREDICTED: serine/threonine-protein kinase WNK1-like [Malus domestica] | 725 | 002810 (3) | ref|XP_004230120.1| | 1e-13 | PREDICTED: probable serine/threonine-protein kinase WNK9 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF027J05+ AGTGCAGTAGTTGTGCCACACATGGCCGGTTCGAGGAGATTACGTATCAAACAAA
rJMSF029C02+ CAGTGCAGTAGTTGTGCCACACATGGCCCGTTCGAGGAGATTACGTATCAAACAAA
rJMSF016B07+ AGTGCAGTAGTTGTGCCACACATGGCCGGTTCGAGGAGATTACGTATCAAACAAA
____________________________________________________________
consensus CAGTGCAGTAGTTGTGCCACACATGGCCGGTTCGAGGAGATTACGTATCAAACAAA
. : . : . : . : . : . :
rJMSF027J05+ TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
rJMSF029C02+ TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
rJMSF016B07+ TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
____________________________________________________________
consensus TAGCCCTCGGGTGAATGCTTCTAACCATGAAGACGATCCGGCTTCATCGAGCCAAATAAA
. : . : . : . : . : . :
rJMSF027J05+ TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCAGTGTG
rJMSF029C02+ TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCA--GTG
rJMSF016B07+ TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCAGTGTG
____________________________________________________________
consensus TGGCTTCCATCACATGGAATATTGGGACAGGCACGAAAGCCTCGAGTGCAGCTCAGTGTG
. : . : . : . : . : . :
rJMSF027J05+ CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
rJMSF029C02+ CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
rJMSF016B07+ CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
____________________________________________________________
consensus CTCCGGGGAGAGCCATTCCCTTGAAGAAAGCGAGAAACAGTATCAAGAAGTTTCGACTAA
. : . : . : . : . : . :
rJMSF027J05+ AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
rJMSF029C02+ AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
rJMSF016B07+ AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
____________________________________________________________
consensus AGAGGCAGGCGAGAGTTGAGATGGTTTGCAACAAAGTAACAGATAATAAGGTTGAGGGAA
. : . : . : . : . : . :
rJMSF027J05+ TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
rJMSF029C02+ TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
rJMSF016B07+ TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
____________________________________________________________
consensus TTTAATGGTTTTTGAGAAATTGAGCCATGAATCCATGTTCTTCAATCGTCTTTCAGATCA
. : . : . : . : . : . :
rJMSF027J05+ ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
rJMSF029C02+ ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
rJMSF016B07+ ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
____________________________________________________________
consensus ACCGATAATATAGAAGTTGTGCTCGAAAGTGCTGCCCCAGTTCTGGTATCCCAAAGGGCC
. : . : . : . : . : . :
rJMSF027J05+ CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
rJMSF029C02+ CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
rJMSF016B07+ CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
____________________________________________________________
consensus CGAAAATGTGAGGCGAACAGATCGATTTGTCTACTGTCAAGCAAAAGAAAAAAGAGAACT
. : . : . : . : . : . :
rJMSF027J05+ TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTGTTTGTTTATAATGTTT
rJMSF029C02+ TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTATTTGTTTATAATGTTT
rJMSF016B07+ TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTGTTTGTTCATAATGTTT
____________________________________________________________
consensus TTCTTTTATCAACAACTTCAGCGCATCATCACCGGTTGACACTGTTTGTTTATAATGTTT
. : . : . : . : . : . :
rJMSF027J05+ TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
rJMSF029C02+ TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
rJMSF016B07+ TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
____________________________________________________________
consensus TCAGGCTCAGATTCATGTTCCTAAATTTTCACAAAAATTGCAGGCTGTATAGAACCATGA
. : . : . : . : . : . :
rJMSF027J05+ GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
rJMSF029C02+ GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
rJMSF016B07+ GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
____________________________________________________________
consensus GGCACCCTTTCACCCCCTTCCCCTTCTTGTCCATCCACCCTCTTTTCTTCACATTGTTAG
. : . : . : . : . : . :
rJMSF027J05+ ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
rJMSF029C02+ ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
rJMSF016B07+ ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
____________________________________________________________
consensus ATTGGCTATAGAGCATTTTCTTGTTGAGAAAAGGCTGATTGAGGGCCAAATGTAAGTATA
. : . : . : . : . : . :
rJMSF027J05+ CCAAGAGAAAT
rJMSF029C02+ CCAAGAGAAAT
rJMSF016B07+ CCAAGAGAAATGTAATTATTAAGGCTTAGGATTCCCTTATGGGATACCTTCTTGTTCCCA
____________________________________________________________
consensus CCAAGAGAAATGTAATTATTAAGGCTTAGGATTCCCTTATGGGATACCTTCTTGTTCCCA