Contig 002808:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF024D07-                                                           GAATGGGAATAG
                      ____________________________________________________________
consensus                                                             GAATGGGAATAG
 
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JMSF024D07-           CTAAAGGAATAGCGAGAGGCTTGGTGTTCCTTCACAACAATGTGAAGCTCATTCACGGGA
                      ____________________________________________________________
consensus             CTAAAGGAATAGCGAGAGGCTTGGTGTTCCTTCACAACAATGTGAAGCTCATTCACGGGA
 
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JMSF024D07-           ATCTCACATCCGGGAATGTGTTACTAGACGAAAACACGAATGCCAAGATTGCAGACTACG
rJMSF024D07+                                              CGAATGCCAAGATTGCAGNCTACG
rJMSF015M08+                 ATCCGGGAATGTGTTACTAGACGAAAACACGAATGCCAAGATTGCAGACTACG
                      ____________________________________________________________
consensus             ATCTCACATCCGGGAATGTGTTACTAGACGAAAACACGAATGCCAAGATTGCAGACTACG
 
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JMSF024D07-           CACTTTCTCGTTTGATGACTGCAGCTGCAAATGCGAACGCGATTGCGACTTCGGGAGGTC
rJMSF024D07+          CACCTTCTCGTNTGATGACTGCAGCTGCAAATGCGAACGCGATTGNGACTTCGGGAGGTC
rJMSF015M08+          CACTTTCTCGTTTGATGACTGCAGCTGCAAATGCGAACGCGATTGCGACTTCGGGAGGTC
                      ____________________________________________________________
consensus             CACTTTCTCGTTTGATGACTGCAGCTGCAAATGCGAACGCGATTGCGACTTCGGGAGGTC
 
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JMSF024D07-           TTGGATACCGGGCTCCCGAGCTGTCGAAGCTCAAGAAGGCCAACAGGAAGACCGATGTTC
rJMSF024D07+          TTGGATACCGGGCTCCCGAGCTGTTGAAGNTCAAGAAGGCCAACAGGAAGACCGATGTTC
rJMSF015M08+          TTGGATACCGGGCTCCCGAGCTGTCGAAGCTCAAGAAGGCCAACAGGAAGACCGATGTTC
                      ____________________________________________________________
consensus             TTGGATACCGGGCTCCCGAGCTGTCGAAGCTCAAGAAGGCCAACAGGAAGACCGATGTTC
 
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JMSF024D07-           ACAGCCTTGGAGTCGTCATGCTGGAGCTCCTCACGGGGAAGTCTCCAGCCCGGGAGGTGA
rJMSF024D07+          ACAGCCTNGGAGTCGNCATGCNGGAGCNCCTCACGGGGAAGTCTCCNGCCCGGGAGGTGA
rJMSF015M08+          ACAGCCTTGGAGTCGTCATGCTGGAGCTCCTCACGGGGAAGTCTCCAGCCCGGGAGGTGA
                      ____________________________________________________________
consensus             ACAGCCTTGGAGTCGTCATGCTGGAGCTCCTCACGGGGAAGTCTCCAGCCCGGGAGGTGA
 
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JMSF024D07-           TGAACAGCGTGGATTTGCCTCGATGGGTTGCCTCGATGGCGAAAGAGGAATCGAGCAATC
rJMSF024D07+          NGAACAGNGTGGATTNGCCTCGANGGGTTGCCTCGATGGCGAAAGNGGAATCGAGCAATC
rJMSF015M08+          TGAACAGCGTGGATTTGCCTCGATGGGTTGCCTCGATGGCGAAAGAGGAATCGAGCAATC
                      ____________________________________________________________
consensus             TGAACAGCGTGGATTTGCCTCGATGGGTTGCCTCGATGGCGAAAGAGGAATCGAGCAATC
 
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JMSF024D07-           AAGTTTTCGATGTGGATTTGATGAACGATGCGTCGATTATCGGTGATGAGCTGTTGACTG
rJMSF024D07+          AAGTTTTCGATGTGGATTTGATGAACGATGCGTCGATTATCGGTGATGAGCTGTTGANTG
rJMSF015M08+          AAGTTTTCGATGTGGATTTGATGAACGATGCGTCGATTATCGGTGATGAGCTGTTGACTG
                      ____________________________________________________________
consensus             AAGTTTTCGATGTGGATTTGATGAACGATGCGTCGATTATCGGTGATGAGCTGTTGACTG
 
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JMSF024D07-           CATTGAAGCTAGCCTTGCATTGTGTCCATCCTTCCCCCTCTGCTAGACCTGAAGCTCAGC
rJMSF024D07+          CNTTGAAGCTANCCTTGCNTTGTGTCCATCCTTCCCCCTTTNCTAGNCCTGAAGCTCAGC
rJMSF015M08+          CATTGAAGCTAGCCTTGCATTGTGTCCATCCTTCCCCCTCTGCTAGACCTGAAGCTCAGC
                      ____________________________________________________________
consensus             CATTGAAGCTAGCCTTGCATTGTGTCCATCCTTCCCCCTCTGCTAGACCTGAAGCTCAGC
 
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JMSF024D07-           AGGTCCTCCAGCAACTGGAAGAACTCAGTCCTTCCCCTACTTCAACAAGGGAGTAAGAGC
rJMSF024D07+          AGGTCCTCCAGCAATTGGAAGAACTCAGTCCTTCCCCTACTTCAACAAGGGAGTAAGAGC
rJMSF015M08+          AGGTCCTCCAGCAACTGGAAGAACTCAGTCCTTCCCCTACTTCAACAAGGGAGTAAGAGC
                      ____________________________________________________________
consensus             AGGTCCTCCAGCAACTGGAAGAACTCAGTCCTTCCCCTACTTCAACAAGGGAGTAAGAGC
 
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JMSF024D07-           TCTATTTGCCTCAATTTCCCGACTCGGGTCGAATCTGTATTAGTCTTACAGTGGTGGAG 
rJMSF024D07+          TCTATTTGCCTCAANTTCCCGACTCGGGTCGAATCTGTATTAGTNNTACAGTGGTGGAGA
rJMSF015M08+          TCTATTTGCCTCAATTTCCCGACTCGGGTCGAATCTGTATTAGTCTTACAGTGGTGGAGA
                      ____________________________________________________________
consensus             TCTATTTGCCTCAATTTCCCGACTCGGGTCGAATCTGTATTAGTCTTACAGTGGTGGAGA
 
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rJMSF024D07+          TATCAGACGATGCCATATGNCATCNAACAGTAACGTTGTAGTCCNAAAATAGGAAGANCG
rJMSF015M08+          TATCAGACGATGCCATATGACATCAAACAGTAACGTTGTAGTCCAAAAATAGGAAGA-CG
                      ____________________________________________________________
consensus             TATCAGACGATGCCATATGACATCAAACAGTAACGTTGTAGTCCAAAAATAGGAAGANCG
 
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rJMSF024D07+          AGGTTGGAGTTTGTAAGAATGAAATTAAGGTAAAAAATTTAAAAAGAGAAAAGTAANGTC
rJMSF015M08+          AGGTTGGAGTTTGTAAGAATGAAATTAAGGTAAAAAATTTAAAAAGAGAAAAGTAATGTC
                      ____________________________________________________________
consensus             AGGTTGGAGTTTGTAAGAATGAAATTAAGGTAAAAAATTTAAAAAGAGAAAAGTAATGTC
 
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rJMSF024D07+          TTTATTTTAGACTATGGCATCACTGTTGAGTCGTTGTAAAATTTTCTTGTGCCTTTATCA
rJMSF015M08+          TTTATTTTAGACTATGGCATCACTGTTGAGTTGTTGTAAAATTTTCTTGTGCCTTTATCA
                      ____________________________________________________________
consensus             TTTATTTTAGACTATGGCATCACTGTTGAGTTGTTGTAAAATTTTCTTGTGCCTTTATCA
 
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rJMSF024D07+          C                                                           
rJMSF015M08+          CACTAATGTATTAGGATTTAGGAGGCACATGTAACTATTCTTTCATTCTTAAGTCTGCAA
                      ____________________________________________________________
consensus             CACTAATGTATTAGGATTTAGGAGGCACATGTAACTATTCTTTCATTCTTAAGTCTGCAA