Contig 002807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001L22Sequence289004910 (2)gb|KJB51034.1|4e-25hypothetical protein B456_008G198300 [Gossypium raimondii]739002807 (3)ref|XP_009625768.1|2e-72PREDICTED: nudix hydrolase 3 [Nicotiana tomentosiformis]
JMSF013F05Sequence587016726716002807 (3)ref|XP_009625768.1|6e-63PREDICTED: nudix hydrolase 3 [Nicotiana tomentosiformis]
JMSF015K15Sequence471004910 (2)gb|KJB51034.1|6e-81hypothetical protein B456_008G198300 [Gossypium raimondii]759002807 (3)ref|XP_009625768.1|2e-65PREDICTED: nudix hydrolase 3 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF013F05+ CTGCAAGAGCTCCACTCAGCGCT
                      ____________________________________________________________
consensus CTGCAAGAGCTCCACTCAGCGCT
 
. : . : . : . : . : . :
rJMSF013F05+ AGAAGAAACTAAAGCCGACATTGTTGGACTGTGGGCCCTAAAGTTTCTAATTGGCGAGGG
                      ____________________________________________________________
consensus AGAAGAAACTAAAGCCGACATTGTTGGACTGTGGGCCCTAAAGTTTCTAATTGGCGAGGG
 
. : . : . : . : . : . :
rJMSF013F05+ TTTGCTTCCGAAGAGCCTAGTGAGATCGATGTATGTCTCTTTTCTTGCTGGATGTTTTCG
                      ____________________________________________________________
consensus TTTGCTTCCGAAGAGCCTAGTGAGATCGATGTATGTCTCTTTTCTTGCTGGATGTTTTCG
 
. : . : . : . : . : . :
rJMSF013F05+ CTCTGTGCGCTTTGGATTAGAGGAAGCTCATGGCAAAGGGCAGGCGCTGCAGTTCAATTA
                      ____________________________________________________________
consensus CTCTGTGCGCTTTGGATTAGAGGAAGCTCATGGCAAAGGGCAGGCGCTGCAGTTCAATTA
 
. : . : . : . : . : . :
rJMSF013F05+ TATGTTCGAGAAAATTGCCTTTGTCTTACAACCTGATGAGACCTTCTCCATCGACTTCGA
                      ____________________________________________________________
consensus TATGTTCGAGAAAATTGCCTTTGTCTTACAACCTGATGAGACCTTCTCCATCGACTTCGA
 
. : . : . : . : . : . :
rJMSF013F05+ TAAGGCAAGATTTTGTGATCTGTTAGGATTAAACGTAACCATTCGAAGCAAAATGTTTAT
                      ____________________________________________________________
consensus TAAGGCAAGATTTTGTGATCTGTTAGGATTAAACGTAACCATTCGAAGCAAAATGTTTAT
 
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rJMSF013F05+ TTTTCCTATTGTGAAAGGTCGAGGATGTTGTCGAGAGCTTGAGTAGGGAAATCCTTACAG
rJMSF001L22+ AAGGTCGAGGATGTTGTCGAGAGCTTGAGTAGGGAAATCCTTACAG
rJMSF015K15+ AAGGTCGAGGATGTTGTCGAGAGCTTGAGTAGGGAAATCCTTACAG
                      ____________________________________________________________
consensus TTTTCCTATTGTGAAAGGTCGAGGATGTTGTCGAGAGCTTGAGTAGGGAAATCCTTACAG
 
. : . : . : . : . : . :
rJMSF013F05+ TACAAGCAAGAGGCGATAAAGATGGTGCCCAAATGCTTCTTAAGAAATATGGCGTTATGA
rJMSF001L22+ TACAAGCGAGAGGCGATAAAGATGGTGCCCAAATGCTTCTTAAGAAATATGGCGTTATGA
rJMSF015K15+ TACAAGCGAGAGGCGATAAAGATGGTGCCCAAATGCTTCTTAAGAAATATGGCGTTATGA
                      ____________________________________________________________
consensus TACAAGCGAGAGGCGATAAAGATGGTGCCCAAATGCTTCTTAAGAAATATGGCGTTATGA
 
. : . : . : . : . : . :
rJMSF013F05+ CTCCTCCACTGCAATGTGCACTCCAAAAACTGGAAACGATTCAGGTTCCGGTGGACATAG
rJMSF001L22+ CTCCTCCACTACAATGTGCACTCCAAAAACTGGAAACAATTCAGGTTCCGGTGGACATAG
rJMSF015K15+ CTCCTCCACTACAATGTGCACTCCAAAAACTGGAAACAATTCAGGTTCCGGTGGACATAG
                      ____________________________________________________________
consensus CTCCTCCACTACAATGTGCACTCCAAAAACTGGAAACAATTCAGGTTCCGGTGGACATAG
 
. : . : . : . : . : . :
rJMSF013F05+ TTCCTGAATTTCCCGTTGCTGATCAAATTTTACGTGAAAGCCATTGAGGACTTGACATTA
rJMSF001L22+ TTCCTGAATTTCCCATTGCTGATCAAATTTTACGTGAAAGCCATTGAGGACTTGACATTA
rJMSF015K15+ TTCCTGAATTTCCCATTGCTGATCAAATTTTACGTGAAAGCCATTGAGGACTTGACATTA
                      ____________________________________________________________
consensus TTCCTGAATTTCCCATTGCTGATCAAATTTTACGTGAAAGCCATTGAGGACTTGACATTA
 
. : . : . : . : . : . :
rJMSF013F05+ TAAACTGTTCTTGAAGGAGGAGCACAGGCAGAGAGAGAGAGAGATCATTAACTATGTGTA
rJMSF001L22+ TAAACTGTTCTTGAAGGAGGAGCACAGGCA------GAGAGAGAACATTAACTATGTGTA
rJMSF015K15+ TAAACTGTTCTTGAAGGAGGAGCACAGGCA------GAGAGAGAACATTAACTATGTGTA
                      ____________________________________________________________
consensus TAAACTGTTCTTGAAGGAGGAGCACAGGCA------GAGAGAGAACATTAACTATGTGTA
 
. : . : . : . : . : . :
rJMSF013F05+ AGATAAAAATCATAAAATGATGGGGTTTTTATGCTGTTGTGAACAGAAGTTGCATCAATA
rJMSF001L22+ AGA---------TAAAATGATGGGGTTTTTATGCTGTTGTGAACAGAAGTTGCATCAATA
rJMSF015K15+ AGA---------TAAAATGATGGGGTTTTTATGCTGTTGTGAACAGAAGTTGCATCAATA
                      ____________________________________________________________
consensus AGA---------TAAAATGATGGGGTTTTTATGCTGTTGTGAACAGAAGTTGCATCAATA
 
. : . : . : . : . : . :
rJMSF013F05+ ATGTGGGATTTGTATGTTTAGAACTGAAAACA
rJMSF001L22+ ATGTGGGATTTGTATGTTTAGAACTGAAAACAGAAGCTAAGATCTTGTGGTCTAATGGCA
rJMSF015K15+ ATGTGGGATTTGTATGTTTAGAACTGAAAACAGAAGCTAAGATCTTGTGGTCTAATGGCA
                      ____________________________________________________________
consensus ATGTGGGATTTGTATGTTTAGAACTGAAAACAGAAGCTAAGATCTTGTGGTCTAATGGCA
 
. : . : . : . : . : . :
rJMSF001L22+ CTAAGGTTGCACTCTCATATGGGTTGTTGTGAGTTCGAGCCTCAGTGGAGGCGACATTGA
rJMSF015K15+ CTAAGGTTGCACTCTCATATGGGTTGTTGTGAGTTCGAGCCTCAGTGGAGGCGACATTGA
                      ____________________________________________________________
consensus CTAAGGTTGCACTCTCATATGGGTTGTTGTGAGTTCGAGCCTCAGTGGAGGCGACATTGA
 
. : . : . : . : . : . :
rJMSF001L22+ CTCTTTGTGTTTCAGTAGGTTAAGAAAGTAGTTATGCACAGATACTACAATGTGTTACTT
rJMSF015K15+ CTCTTTGTGTTTCAGTAGGTTAAGAAAGTAGTTATGCACAGATACTACAATGTGTTACTT
                      ____________________________________________________________
consensus CTCTTTGTGTTTCAGTAGGTTAAGAAAGTAGTTATGCACAGATACTACAATGTGTTACTT
 
. : . : . : . : . : . :
rJMSF001L22+ TT
rJMSF015K15+ TTTGTGGTTTGAGCCGGCGGTCAGCTACAAGCTTGATTGAATCGAACTTGTAATTTTCCG
                      ____________________________________________________________
consensus TTTGTGGTTTGAGCCGGCGGTCAGCTACAAGCTTGATTGAATCGAACTTGTAATTTTCCG