Contig 002806:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF040F11-                                         CGGTATTAATGTCTGCTTTTCATGATGGCT
                      ____________________________________________________________
consensus                                           CGGTATTAATGTCTGCTTTTCATGATGGCT
 
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JMSF040F11-           ATGGAGGCACCGGGTTCATGTCTTGGTAAAAACCAGTGATTCTTGTCAAGAAAATTAGAG
                      ____________________________________________________________
consensus             ATGGAGGCACCGGGTTCATGTCTTGGTAAAAACCAGTGATTCTTGTCAAGAAAATTAGAG
 
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JMSF040F11-           AAAGAAAGAGCTGAAAATAAGGGAATGCTTTTCTTTTCTTCCCTTTTCCTGTGATTCTCA
                      ____________________________________________________________
consensus             AAAGAAAGAGCTGAAAATAAGGGAATGCTTTTCTTTTCTTCCCTTTTCCTGTGATTCTCA
 
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JMSF040F11-           AAGATTGAACTTTTGCTCCAATTTTGTATCTGGGTTGGGGATAAAGGTTGAATTTTTGAT
                      ____________________________________________________________
consensus             AAGATTGAACTTTTGCTCCAATTTTGTATCTGGGTTGGGGATAAAGGTTGAATTTTTGAT
 
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JMSF040F11-           AGATTTCACACTCTGGGTCTGGTAAAAATTGAATTTTTACCATATCTTGAGTTCCAGAGT
                      ____________________________________________________________
consensus             AGATTTCACACTCTGGGTCTGGTAAAAATTGAATTTTTACCATATCTTGAGTTCCAGAGT
 
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JMSF040F11-           TGATATTTGTGACTCAATTGCTGGTTTCTAGCTGAACTAAAGAGAGAAGGAAGGAGCTTG
                      ____________________________________________________________
consensus             TGATATTTGTGACTCAATTGCTGGTTTCTAGCTGAACTAAAGAGAGAAGGAAGGAGCTTG
 
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JMSF040F11-           AGAGAAACAAAAATGGCAGACAATATAGATGGTTCTTTGCTATCTCCCACAGGGAACAAT
rJMSF040F11+                                                        CCACAGGGAACAAT
                      ____________________________________________________________
consensus             AGAGAAACAAAAATGGCAGACAATATAGATGGTTCTTTGCTATCTCCCACAGGGAACAAT
 
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JMSF040F11-           AGAAAGCCCACTTCATTTTTCAGTTCTTCAAAGTTGTTTACTAGTTTTTCT-GGGAAAAA
rJMSF040F11+          AGAAAGCCCACTTCATTTTTCAGTTCTTCAAAGTTGTTTACTAGTTTTTCTGGGGAAAAA
                      ____________________________________________________________
consensus             AGAAAGCCCACTTCATTTTTCAGTTCTTCAAAGTTGTTTACTAGTTTTTCTGGGGAAAAA
 
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JMSF040F11-           TTTTGGTGAGGCTGAGGTTATGATGAGCCCAACTTCTATACTTGATACTAAACCCTATGG
rJMSF040F11+          TTTTGGTGAGGCTGAGGTTATGATGAGCCCAACTTCTATACTTGATACTAAACCCTATGG
                      ____________________________________________________________
consensus             TTTTGGTGAGGCTGAGGTTATGATGAGCCCAACTTCTATACTTGATACTAAACCCTATGG
 
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JMSF040F11-           ATCTTTCATAAACCCATTTTGGAATGACACAAAATCCCCCAAAAGAGAGAGTAGAGTGAA
rJMSF040F11+          ATCTTTCATAAACCCATTTTGGAATGACACAAAATCCCCCAAAAGAGAGAGTAGAGTGAA
                      ____________________________________________________________
consensus             ATCTTTCATAAACCCATTTTGGAATGACACAAAATCCCCCAAAAGAGAGAGTAGAGTGAA
 
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JMSF040F11-           TTGTGGGTCAAAGGGTGTAGGTCTAGGCCTAGTTGATGCTCTGATTGATGAGAAATCTGA
rJMSF040F11+          TTGTGGGTCAAAGGGTGTAGGTCTAGGCCTAGTTGATGCTCTGATTGATGAGAAATCTGA
JMSF015B22-               GGGTCAAAGGGTGTAGGTCTAGGCCTAGTTGATGCTCTGATTGATGAGAAATCTGA
rJMSF015B22+              GGGTCAAAGGGTGTAGGTCTAGGCCTAGTTGATGCTCTGATTGATGAGAAATCTGA
                      ____________________________________________________________
consensus             TTGTGGGTCAAAGGGTGTAGGTCTAGGCCTAGTTGATGCTCTGATTGATGAGAAATCTGA
 
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JMSF040F11-           GTCAAAACAGTTAAACTGTACAAGTANAATGGTTGTTTTTGGCTCACA            
rJMSF040F11+          GTCAAAACAGTTAAACTGTACAAGTAGAATGGTTGTTTTTGGCTCACAGTTGAAGATTCA
JMSF015B22-           GTCAAAACAGTTAAACTGTACAAGTAGAATGGTTGTTTTTGGCTCACAGTTGAAGATTCA
rJMSF015B22+          GTCAAAACAGTTAAACTGTACAAGTAGAATGGTTGTTTTTGGCTCACAGTTGAAGATTCA
                      ____________________________________________________________
consensus             GTCAAAACAGTTAAACTGTACAAGTAGAATGGTTGTTTTTGGCTCACAGTTGAAGATTCA
 
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rJMSF040F11+          GATCCCATCTGTTGTTTCTGCAGCTAGTTCATCACCATCATCCCCTAGTGATTTTGGGAT
JMSF015B22-           GATCCCATCTGTTGTTTCTTCAGCTAGTTCATCACCATCATCCCCTAGTGATTTTGGGAT
rJMSF015B22+          GATCCCATCTGTTGTTTCTTCAGCTAGTTCATCACCATCATCCCCTAGTGATTTTGGGAT
                      ____________________________________________________________
consensus             GATCCCATCTGTTGTTTCTTCAGCTAGTTCATCACCATCATCCCCTAGTGATTTTGGGAT
 
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rJMSF040F11+          CAAGACCAGGAATTCCCAGTGGGGTTCTTTTATGGCCAAGAAATCGCCATTTGGATCCCC
JMSF015B22-           CAAGACCAGGAATTCCCAGTGGGGTTCTTTTATGGCCAAGAAATCGCCATTTGGATCCCC
rJMSF015B22+          CAAGACCAGGAATTCCCAGTGGGGTTCTTTTATGGCCAAGAAATCGCCATTTGGATCCCC
                      ____________________________________________________________
consensus             CAAGACCAGGAATTCCCAGTGGGGTTCTTTTATGGCCAAGAAATCGCCATTTGGATCCCC
 
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rJMSF040F11+          GGAATCCGGGTTGGAAAACCCGAACTCGGGTTCAGTTCATAGCTGCCTCTCTGCTAGTGA
JMSF015B22-           GGAATCCGGGTTGGAAAACCCGAACTCGGGTTCAGTTCATAGCTGCCTCTCTGCTAGTGA
rJMSF015B22+          GGAATCCGGGTTGGAAAACCCGAACTCGGGTTCAGTTCATAGCTGCCTCTCTGCTAGTGA
                      ____________________________________________________________
consensus             GGAATCCGGGTTGGAAAACCCGAACTCGGGTTCAGTTCATAGCTGCCTCTCTGCTAGTGA
 
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rJMSF040F11+          GATGGAGCTCTCAGAGGACTATACTTGCGTGATCTCGTATGGCCCAAATCCAAGAACCAC
JMSF015B22-           GATGGAGCTCTCAGAGGACTATACTTGCGTGATCTCGTATGGCCCAAATCCAAGAACCAC
rJMSF015B22+          GATGGAGCTCTCAGAGGACTATACTTGCGTGATCTCGTATGGCCCAAATCCAAGAACCAC
                      ____________________________________________________________
consensus             GATGGAGCTCTCAGAGGACTATACTTGCGTGATCTCGTATGGCCCAAATCCAAGAACCAC
 
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rJMSF040F11+          TCATATATTTGACGATTGCATTGTTGAGAGTTGCTTTGGTGTTGCTAGGTGTTCTGAACC
JMSF015B22-           TCATATATTTGACGATTGCATTGTTGAGAGTTGCTTTGGTGTTGCTAGGTGTTCTGAACC
rJMSF015B22+          TCATATATTTGACGATTGCATTGTTGAGAGTTGCTTTGGTGTTGCTAGGTGTTCTGAACC
                      ____________________________________________________________
consensus             TCATATATTTGACGATTGCATTGTTGAGAGTTGCTTTGGTGTTGCTAGGTGTTCTGAACC
 
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rJMSF040F11+          GAAGAAGGGGAACGGGTTGGTTTTTACCAACCGCTCGATGAGCTATCCTTCTCAGAATTT
JMSF015B22-           G                                                           
rJMSF015B22+          GAAGAAGGGGAACGGGTTGGTTTTTACCAACCGCTCGATGAGCTATCCTTCTCAGAATTT
                      ____________________________________________________________
consensus             GAAGAAGGGGAACGGGTTGGTTTTTACCAACCGCTCGATGAGCTATCCTTCTCAGAATTT
 
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rJMSF040F11+          TCTTAGCTTCTGTCACACTTGCAAGAACAACCTTGGACTAGGCAAAGATATTTACATGTA
rJMSF014C22+                   CTGTCACACTTGCAAGAACAACCTTGGTCTAGGCAAAGATATTTACATGTA
rJMSF015B22+          TCTTAGCTTCTGTCACACTTGCAAGAACAACCTTGGACTAGGCAAAGATATTTACATGTA
                      ____________________________________________________________
consensus             TCTTAGCTTCTGTCACACTTGCAAGAACAACCTTGGACTAGGCAAAGATATTTACATGTA
 
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rJMSF040F11+          CAGGGGGGAGAAGGCATTCTGCAGCATTGATTGCAGGGACAGAGAAATGATGTTGGAAGA
rJMSF014C22+          CAGGGGGGAGAAGGCATTCTGCNNCATTNATTGCAGGGACCGAGAAATGATGTTGGAAGA
rJMSF015B22+          CAGGGGGGAGAAGGCATTCTGCAGCATTGATTGCAGGGACAGAGAAATGATGTTGGAAGA
                      ____________________________________________________________
consensus             CAGGGGGGAGAAGGCATTCTGCAGCATTGATTGCAGGGACAGAGAAATGATGTTGGAAGA
 
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rJMSF040F11+          -GGAAGGAATGCAAATTTCAGAATTTGAAGAAGGCTATGATGCTTTTACTTCTTGATAAA
rJMSF014C22+          CGGAAGGAATGCAANTNTCNGAATTTGAAGAAGGCTATGATGCTTNNACTTCTTGATAAA
rJMSF015B22+          -GGAAGGAATGCAAATTTCAGAATTTGAAGAAGGCTATGATGCTTTTACTTCTTGATAAA
                      ____________________________________________________________
consensus             -GGAAGGAATGCAAATTTCAGAATTTGAAGAAGGCTATGATGCTTTTACTTCTTGATAAA
 
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rJMSF040F11+          TAATAATTCTCTACTCTTAATGCTATGCTTTCTGTAC                       
rJMSF014C22+          TAATAATTCTCTACTCTTNATGCTATGCTTTCTGTACATATATATNCTGACTTT      
rJMSF015B22+          TAATAATTCTCTACTCTTAATGCTATGCTTTCTGTACATATATATTCTGACTTTTGATAT
                      ____________________________________________________________
consensus             TAATAATTCTCTACTCTTAATGCTATGCTTTCTGTACATATATATTCTGACTTTTGATAT