Contig 002803:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035O06Sequence441005016 (2)ref|XP_009771489.1|97.8PREDICTED: uncharacterized protein LOC104222014 [Nicotiana sylvestris]752002803 (3)ref|XP_009771489.1|323PREDICTED: uncharacterized protein LOC104222014 [Nicotiana sylvestris]
JMSF014G16Sequence687002803 (3)ref|XP_009771489.1|305PREDICTED: uncharacterized protein LOC104222014 [Nicotiana sylvestris]
JMSF014H16Sequence506005016 (2)ref|XP_009771489.1|123PREDICTED: uncharacterized protein LOC104222014 [Nicotiana sylvestris]726002803 (3)ref|XP_009771489.1|305PREDICTED: uncharacterized protein LOC104222014 [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+                                         TGAATCAATCGGCGATGGAAAGGAAATCA
                      ____________________________________________________________
consensus                                            TGAATCAATCGGCGATGGAAAGGAAATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          GGAACCATGTTGCCCTGTCTGTAGGGCTAAGTGGAACTGGTTCTCTTCCATTGAAGCTTC
rJMSF014G16+                                                                AGCTTC
rJMSF014H16+                                                                AGCTTC
                      ____________________________________________________________
consensus             GGAACCATGTTGCCCTGTCTGTAGGGCTAAGTGGAACTGGTTCTCTTCCATTGAAGCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          CTGGGAGCTATCCTGGTTCCATTGGATTCAACTCCAACGGTTCTGTCTGTCTTGATGGGA
rJMSF014G16+          CTGGGAGCTATCCTGGTTCCATTGGATTCAACTCCAACGGTTCTGTCTGTCTTGATGGGA
rJMSF014H16+          CTGGGAGCTATCCTGGTTCCATTGGATTCAACTCCAACGGTTCTGTCTGTCTTGATGGGA
                      ____________________________________________________________
consensus             CTGGGAGCTATCCTGGTTCCATTGGATTCAACTCCAACGGTTCTGTCTGTCTTGATGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          TGATGTTAGTGAATGAATCAGAAAAGGAAGAATGGGGGACAGCAGAGAAAGTGATTGGGT
rJMSF014G16+          TGATGTTAGTGAATGAATCAGAAAAGGAAGAATGGGGGACAGCAGAGAAAGTGATTGGGT
rJMSF014H16+          TGATGTTAGTGAATGAATCAGAAAAGGAAGAATGGGGGACAGCAGAGAAAGTGATTGGGT
                      ____________________________________________________________
consensus             TGATGTTAGTGAATGAATCAGAAAAGGAAGAATGGGGGACAGCAGAGAAAGTGATTGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          GTGGGTACAATCCAACCCAGAAGAAGGTATTCTTCACAGTGGATTCACAGCTTATCCATG
rJMSF014G16+          GTGGGTACAATCCAACCCAGAAGAAGGTATTCTTCACAGTGGATTCACAGCTTATCCATG
rJMSF014H16+          GTGGGTACAATCCAACCCAGAAGAAGGTATTCTTCACAGTGGATTCACAGCTTATCCATG
                      ____________________________________________________________
consensus             GTGGGTACAATCCAACCCAGAAGAAGGTATTCTTCACAGTGGATTCACAGCTTATCCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          AAATCCACTGCAAATCCGAGGAATTTGGGAACCCATTGTACCCAACTTTAGCTGCAAATG
rJMSF014G16+          AAATCCACTGCAAATCCGAGGAATTTGGGAACCCATTGTACCCAACTTTAGCTGCAAATG
rJMSF014H16+          AAATCCACTGCAAATCCGAGGAATTTGGGAACCCATTGTACCCAACTTTAGCTGCAAATG
                      ____________________________________________________________
consensus             AAATCCACTGCAAATCCGAGGAATTTGGGAACCCATTGTACCCAACTTTAGCTGCAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          CTGACATAATGGTTGTGGTGAATCTTGGGCAGAGTGCATTCAAATATGCAGCTGCAAATC
rJMSF014G16+          CTGACATAATGGTTGTGGTGAATCTTGGGCAGAGTGCATTCAAATATGCAGCTGCAAATC
rJMSF014H16+          CTGACATAATGGTTGTGGTGAATCTTGGGCAGAGTGCATTCAAATATGCAGCTGCAAATC
                      ____________________________________________________________
consensus             CTGACATAATGGTTGTGGTGAATCTTGGGCAGAGTGCATTCAAATATGCAGCTGCAAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          TGCAGAGAACTCCAAACCCATGCTTCATTGGGCCTCTGGCAAGCAATTCTCCAGCAGCTA
rJMSF014G16+          TGCAGAGAACTCCAAACCCATGCTTCATTGGGCCTCTGGCAAGCAATTCTCCAGCAGCTA
rJMSF014H16+          TGCAGAGAACTCCAAACCCATGCTTCATTGGGCCTCTGGCAAGCAATTCTCCAGCAGCTA
                      ____________________________________________________________
consensus             TGCAGAGAACTCCAAACCCATGCTTCATTGGGCCTCTGGCAAGCAATTCTCCAGCAGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          TAGGGTATGAAGACAGCAAGGAGCTTTTCTCCATGGGGAGAATCGATTCCCAGTGGCTGA
rJMSF014G16+          TAGGGTATGAAGACAGCAAGGAGCTTTTCTCCATGGGGAGAATCGATTCCCAGTGGCTGA
rJMSF014H16+          TAGGGTATGAAGACAGCAAGGAGCTTTTCTCCATGGGGAGAATCGATTCCCAGTGGCTGA
                      ____________________________________________________________
consensus             TAGGGTATGAAGACAGCAAGGAGCTTTTCTCCATGGGGAGAATCGATTCCCAGTGGCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          ACAGAAGCGCAACTGCAGCAAGGAGCAATGGCAACAGTGTGAATAATCTGAAGCAGATAG
rJMSF014G16+          ACAGAAGCGCAACTGCAGCAAGGAGCAATGGCAACAGTGTGAATAATCTGAAGCAGATAG
rJMSF014H16+          ACAGAAGCGCAACTGCAGCAAGGAGCAATGGCAACAGTGTGAATAATCTGAAGCAGATAG
                      ____________________________________________________________
consensus             ACAGAAGCGCAACTGCAGCAAGGAGCAATGGCAACAGTGTGAATAATCTGAAGCAGATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          ATTTTGATGACTTGGAATCTGAAGGGGAGCTGTTTGAAATTGTGTTGGATAGTTCAGGGA
rJMSF014G16+          ATTTTGATGACTTGGAATCTGAAGGGGAGCTGTTTGAAATTGTGTTGGATAGTTCAGGGA
rJMSF014H16+          ATTTTGATGACTTGGAATCTGAAGGGGAGCTGTTTGAAATTGTGTTGGATAGTTCAGGGA
                      ____________________________________________________________
consensus             ATTTTGATGACTTGGAATCTGAAGGGGAGCTGTTTGAAATTGTGTTGGATAGTTCAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          AAAATCCCAACACTCTATAGCATCATCATCATCCTAACAAAACATCATTAGATTAGATCA
rJMSF014G16+          AAAATCCCAACACTCTATAGCATCATCATCATCCTAACAAAACATCATTAGATTAGATCA
rJMSF014H16+          AAAATCCCAACACTCTATAGCATCATCATCATCCTAACAAAACATCATTAGATTAGATCA
                      ____________________________________________________________
consensus             AAAATCCCAACACTCTATAGCATCATCATCATCCTAACAAAACATCATTAGATTAGATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          TTTCTTTTAATCATACTTTGCTTGTGCATGTTAATTAGTTTCTTGTTTTCCCCTCTTTTC
rJMSF014G16+          TTTCTTTTAATCATACTTTGCTTGTGCATGTTAATTAGTTTCTTGTTTTCCCCTCTTTTC
rJMSF014H16+          TTTCTTTTAATCATACTTTGCTTGTGCATGTTAATTAGTTTCTTGTTTTCCCCTCTTTTC
                      ____________________________________________________________
consensus             TTTCTTTTAATCATACTTTGCTTGTGCATGTTAATTAGTTTCTTGTTTTCCCCTCTTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035O06+          TCT                                                         
rJMSF014G16+          TCTTGAATGAAGGCTGCAAAA                                       
rJMSF014H16+          TCTTGAATGAAGGCTGCAAAATTTTGTGTGAATTGCCTTCCTTGTAACCAGAAAAATATT
                      ____________________________________________________________
consensus             TCTTGAATGAAGGCTGCAAAATTTTGTGTGAATTGCCTTCCTTGTAACCAGAAAAATATT