| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018F01 | Sequence | 587 | 005112 (9) | ref|XP_011076581.1| | 4e-79 | PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [S | 682 | 002802 (6) | ref|XP_010667551.1| | 5e-15 | PREDICTED: N-terminal kinase-like protein [Beta vulgaris subsp. vulgaris] |
| JMFS028F07 | Sequence | 624 | 002802 (6) | ref|XP_011076581.1| | 1e-37 | PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [S | |||||
| JMSF014F15 | Sequence | 480 | 005112 (9) | ref|XP_006367546.1| | 2e-61 | PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Solanum | 787 | 002802 (6) | ref|XP_011076582.1| | 1e-20 | PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [S |
| JMSF026K23 | Sequence | 648 | 005112 (9) | ref|XP_011076582.1| | 2e-92 | PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [S | 735 | 002802 (6) | ref|XP_011076582.1| | 2e-32 | PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X2 [S |
| JMSF027I21 | Sequence | 667 | 002802 (6) | ref|XP_010667551.1| | 4e-09 | PREDICTED: N-terminal kinase-like protein [Beta vulgaris subsp. vulgaris] | |||||
| JMSF027I22 | Sequence | 688 | 005112 (9) | ref|XP_011076581.1| | 7e-118 | PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [S | 713 | 002802 (6) | ref|XP_011076581.1| | 1e-11 | PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [S |
This contig is upended
. : . : . : . : . : . :
JMFS028F07- GTAAACCTTCTGAACATAGTTCTGTTACCCCAGCGA
____________________________________________________________
consensus GTAAACCTTCTGAACATAGTTCTGTTACCCCAGCGA
. : . : . : . : . : . :
JMFS028F07- ATTCTAGTGCACCACATAGCTCTGCAATTTCCAATGCTAGCTCGGGTACAGAAGATGCAA
____________________________________________________________
consensus ATTCTAGTGCACCACATAGCTCTGCAATTTCCAATGCTAGCTCGGGTACAGAAGATGCAA
. : . : . : . : . : . :
JMFS028F07- ATATAGCTCCAATCCAAGTTCGTTCTAGCACGGATATTGCCGATCATCCAGGTCCTGAAT
rJMSF026K23+ GATATTGCCGATCATCCAGGTCCTGAAT
____________________________________________________________
consensus ATATAGCTCCAATCCAAGTTCGTTCTAGCACGGATATTGCCGATCATCCAGGTCCTGAAT
. : . : . : . : . : . :
JMFS028F07- CTCCTACATCTACTGATGGATGGGGCGAGCTTGAAAATGGAATTCACGACGATCTCGAAA
rJMSF026K23+ CTCCTACATNTACTGATGGATGGGGCGAGCNTGAAAATGGAATTCACGACGATCTCGAAA
rJMSF014F15+ ATCTCGAAA
____________________________________________________________
consensus CTCCTACATCTACTGATGGATGGGGCGAGCTTGAAAATGGAATTCACGACGATCTCGAAA
. : . : . : . : . : . :
JMFS028F07- ATGAAAAAGACGGATGGGATGATATGGAGCCACTAGAAGCTCCGATACCACCTGCAGCTC
rJMSF026K23+ ATGAAAAAGACGGATGGGATGATATGGAGCCACTAGAAGCTCCGATACCACCTGCAGCTC
rJMSF014F15+ ATGAAAAAGACGGATGGGATGATATGGAGCCACTAGAAGCTCCGATACCACCTGCAGCTC
____________________________________________________________
consensus ATGAAAAAGACGGATGGGATGATATGGAGCCACTAGAAGCTCCGATACCACCTGCAGCTC
. : . : . : . : . : . :
JMFS028F07- TTGCAAACATCCAAGCTGCTCAAAAACGCCCAGTCTCTCAACCAAAATCACAAGTTTCCA
rJMSF026K23+ TTGCAAACATCCAAGCTGCTCAAAAACGCCCAGTCTCTCAACCAAAATCACAAGTTTCCA
rJMFF018F01+ CTCAACCAAAATCACAAGTTTCCA
rJMSF027I22+ AAAACGCCCAGTCTCTCAACCAAAATCACAAGTT--CC
rJMSF014F15+ TTGCAAACATCCAAGCTGCTCAAAAACGCCCAGTCTCTCAACCAAAATCACAAGTTTCCA
____________________________________________________________
consensus TTGCAAACATCCAAGCTGCTCAAAAACGCCCAGTCTCTCAACCAAAATCACAAGTTTCCA
. : . : . : . : . : . :
JMFS028F07- TTTCAAGACCAAAGAGCATATCAAAGATGAACACAGATGACGATGACTTGTGGGGATCAG
rJMSF026K23+ TTTCAAGACCAAAGAGCATATCAAAGATGAACACAGATGACGATGACTTGTGGGGATCAG
rJMFF018F01+ TTTCAAGACCAAAGAGCATATCAAAGATGAACACAGATGACGATGACTTGTGGGGATCAG
rJMSF027I21+ TCAAGACCAAAGAGCATATCAANGATGAACACAGATGACGATGACTTGTGGGGATCAG
rJMSF027I22+ ATTCNAGACCAAAGAGCATATCAAAGATGAACACAGATGACGATGACTTGTGGGGATCAG
rJMSF014F15+ TTTCAAGACCAAAGAGCATATCAAAGATGAACACAGATGACGATGACTTGTGGGGATCAG
____________________________________________________________
consensus TTTCAAGACCAAAGAGCATATCAAAGATGAACACAGATGACGATGACTTGTGGGGATCAG
. : . : . : . : . : . :
JMFS028F07- CAGCTG-CCCCTGTTCCAAAAACTACTAAAGCAGCAAGCTCAA-GGGGGGCTAGCTTTGA
rJMSF026K23+ CAGCTG-CCACTGTTCCAAAAACTACTAAAGCAGCAAGCTCAA-GGGGGGCTAGCTTTGA
rJMFF018F01+ CAGCTGCCCCCTGTTCCAAAAACTACTAAAGCAGCAAGCTCAA-GGGGGGCTAGCTTTGA
rJMSF027I21+ CAGCTG-CCCCTGTTCCAANAACTANTAAAGCAGCAAGCTCAAGGGGGGGCTAGCTTTGA
rJMSF027I22+ CAGCTG-CCCCTGTTCCAAAAACTACTAAAGCAGCAAGCTCAAGGGGGGGCTAGCTTTGA
rJMSF014F15+ CAGCTG-CCCCTGTTCCAAAAACTACTAAAGCAGCAAGCTCAA-GGGGGGCTAGCTTTGA
____________________________________________________________
consensus CAGCTG-CCCCTGTTCCAAAAACTACTAAAGCAGCAAGCTCAA-GGGGGGCTAGCTTTGA
. : . : . : . : . : . :
JMFS028F07- TAATGATCCATGGGATTCTGTTGCCCCCGCTCCCAAGACGACTGCAAAAAAGGCTGCAAC
rJMSF026K23+ TAATGATCCATGGGATTCTGTTGCCCCCGCTCCCAAGACGACTGCAAAAAAGGCTGCAAC
rJMFF018F01+ TAATGATCCATGGGATTCTGTTGCCCCCGCTCCCAAGACGACTGCAAAAAAGGCTGCAAC
rJMSF027I21+ TAATGATCCATGGGATTCNGTTGCCCCCGCTCCCAAGACGANTGCAAAAAAGGCTGCAAC
rJMSF027I22+ TAATGATCCATGGGATTCTGTTGCCCCCGCTCCCAAGACGACTGCAAAAAAGGCTGCAAC
rJMSF014F15+ TAATGATCCATGGGATTCTGTTGCCCCCGCTCCCAAGACGACTGCAAAAAAGGCTGCAAC
____________________________________________________________
consensus TAATGATCCATGGGATTCTGTTGCCCCCGCTCCCAAGACGACTGCAAAAAAGGCTGCAAC
. : . : . : . : . : . :
JMFS028F07- AGTCGACGATGATCTCTGGGGCTCGATTGCAGCTCCCGAACCAACAACCGCATCAAGACC
rJMSF026K23+ AGTCGACGATGATCTCTGGGGCTCGATTGCAGCTCCCGAACCAACAACCGCATCAAGACC
rJMFF018F01+ AGTCGACGATGATCTCTGGGGCTCGATTGCAGCTCCCGAACCAACAACCGCATCAAGACC
rJMSF027I21+ AGTCGACGATGATCTCTGGGGCTCGATTGCAGCTCCCGAACCAACAACCGCATCAAGACC
rJMSF027I22+ AGTCGACGATGATCTCTGGGGCTCGATTGCAGCTCCCGAACCAACAACCGCATCAAGACC
rJMSF014F15+ AGTCGACGATGATCTCTGGGGCTCGATTGCAGCTCCCGAACCAACAACCGCATCAAGACC
____________________________________________________________
consensus AGTCGACGATGATCTCTGGGGCTCGATTGCAGCTCCCGAACCAACAACCGCATCAAGACC
. : . : . : . : . : . :
JMFS028F07- ATCCGTTGGGCGAGGGCGGAGTAAACCTGCTGCTCCCAA
rJMSF026K23+ ATCCGTTGGGCGAGGGCGGAGTAAACCTGCTGCTCCCAAACTGGGCGCTCAAAGAATCAA
rJMFF018F01+ ATCCGTTGGGCGAGGGCGGAGTAAACCTGCTGCTCCCAAACTGGGCGCTCAAAGAATCAA
rJMSF027I21+ ATCCGTTGGGCGAGGGCGGAGTNAACCTGNTGCTCCCAAACTGGGCGCTCAAAGAATCAA
rJMSF027I22+ ATCCGTTGGGCGAGGGCGGAGTAAACCTGCTGCTCCCAAACTGGGCGCTCAAAGAATCAA
rJMSF014F15+ ATCCGTTGGGCGAGGGCGGAGTAAACCTGCTGCTCCCAAACTGGGCGCTCAAAGAATCAA
____________________________________________________________
consensus ATCCGTTGGGCGAGGGCGGAGTAAACCTGCTGCTCCCAAACTGGGCGCTCAAAGAATCAA
. : . : . : . : . : . :
rJMSF026K23+ CCGAACATCTCCCGGGATGTAAAAGCACAAAAAAAGACCAAGGAGCAGAAATCAGGAAAA
rJMFF018F01+ CCGAACATCTCCCGGGATGTAAAAGCACAAAAAAAGACCAAGGAGCAGAAATCAGGAAAA
rJMSF027I21+ CCGAACATCTCCCGGGATGTAAAAGCACAAAAAAAGACCAAGGAGCAGAAATCAGGAAAA
rJMSF027I22+ CCGAACATCTCCCGGGATGTAAAAGCACAAAAAAAGACCAAGGAGCAGAAATCAGGAAAA
rJMSF014F15+ CCGAACATCTCCCGGGATGTAAAAGCACAAAAAAAGACCAAGGAGCAGAAATCAGGAAAA
____________________________________________________________
consensus CCGAACATCTCCCGGGATGTAAAAGCACAAAAAAAGACCAAGGAGCAGAAATCAGGAAAA
. : . : . : . : . : . :
rJMSF026K23+ GAATCTGGACTGCTGTACATTTTCCTCCTCCCTCCCTCTTCTGGTAACTTCCATTTCAAA
rJMFF018F01+ GAATCTGGACTGCTGTACATTTTCCTCCTCCCTCCCTCTTCTGGTAACTTCCATTTCAAA
rJMSF027I21+ GAATCTGGACTGCTGTACATTTTCCTCCTCCCTCCCTCTTNTGGTAACTTCCATTTCAAA
rJMSF027I22+ GAATCTGGACTGCTGTACATTTTCCTCCTCCCTCCCTCTTCTGGTAACTTCCATTTCAAA
rJMSF014F15+ GAATCTGGACTGCTGTACATTTTCCTCCTCCCTCCCTCTTCTGGTAACTTCCATTTCAAA
____________________________________________________________
consensus GAATCTGGACTGCTGTACATTTTCCTCCTCCCTCCCTCTTCTGGTAACTTCCATTTCAAA
. : . : . : . : . : . :
rJMSF026K23+ TGACCCAAAATGAAGTGATGTCCCCTAGACAGAGGTTACTAATATGTTTTGCTGACCTCA
rJMFF018F01+ TGACCCAAAATGAAGTGATGTCCCCTAGACAGAGGTTACTAATATGTTTTGCTGACCTCA
rJMSF027I21+ TGACCCAAAATGAAGTGATGTCCCCTAGACAGAGGTTACTAATATGTTTTGCTGACCTCA
rJMSF027I22+ TGACCCAAAATGAAGTGATGTCCCCTAGACAGAGGTTACTAATATGTTTTGCTGACCTCA
rJMSF014F15+ TGACCCAAAATGAAGTGATGTCCCCTAGATAGAGGTTACTAATATGTTTTGCTGACCTCA
____________________________________________________________
consensus TGACCCAAAATGAAGTGATGTCCCCTAGACAGAGGTTACTAATATGTTTTGCTGACCTCA
. : . : . : . : . : . :
rJMSF026K23+ TAAGATATGTAATGCCTTAGTTTTCTCAGCCAAACTTCCATTCTTTTT
rJMFF018F01+ TAAGATATGTAATGCCTTAGTTTTCTCAGCCAAACTTCCATTCTTTTTTGCACTGGTTGC
rJMSF027I21+ TAAGATATGTAATGCCTTAGTTTTCTCAGCCAAACTTCCATTCTTTTTTGCACTGGTTGC
rJMSF027I22+ TAAGATATGTAATGCCTTAGTTTTCTCAGCCAAACTTCCATTCTTTTTTGCACTGGTTGC
rJMSF014F15+ TAAGATATGTAATGCCTTAGTTTTCTCAGCCAAACTTCCATTCTTTTTTGCACTGGTTGC
____________________________________________________________
consensus TAAGATATGTAATGCCTTAGTTTTCTCAGCCAAACTTCCATTCTTTTTTGCACTGGTTGC
. : . : . : . : . : . :
rJMFF018F01+ ATATAACTCATTCTTTATATACCATCCAAATTCATTATGCCGCTCTGCTGCCGTTGTCTG
rJMSF027I21+ ATATAACTCATTCTTNATATNCCATCCAAATTCATTATGCCGCTCTGCTGCCGTTGTCTG
rJMSF027I22+ ATATAACTCATTCTTTATATACCATCCAAATTCATTATGCCGCTCTGCTGCCGTTGTCTG
rJMSF014F15+ ATATAACTCATTCTTTATATACCATCCAAATTCATTATGCCGCTCTGCTGCCGTTGTCTG
____________________________________________________________
consensus ATATAACTCATTCTTTATATACCATCCAAATTCATTATGCCGCTCTGCTGCCGTTGTCTG
. : . : . : . : . : . :
rJMFF018F01+ CCTTTCTTAAAGTGAGTAAAATGTATTGTAATATGCTATAAAGTCTGTACTCCTCATC
rJMSF027I21+ CCTTTCTTAAAGTGAGTAAAATGTATTGTAATATGCTATAAAGTCTGTACTCCTCATC
rJMSF027I22+ CCTTTCTTAAAGTGAGTAAAATGTATTGTAATATGCTATAAAGTCTGTACTCCTCATC
rJMSF014F15+ CCTTTCTTAAAGTGAGTAAAATGTATTGTAATATGCTATAAAGTCTGTACTCCTCATCCT
____________________________________________________________
consensus CCTTTCTTAAAGTGAGTAAAATGTATTGTAATATGCTATAAAGTCTGTACTCCTCATCCT