Contig 002801:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007B22Sequence601002801 (6)ref|XP_009620582.1|222PREDICTED: uncharacterized protein LOC104112394 [Nicotiana tomentosiformis] ref|665002801 (6)ref|XP_009620582.1|222PREDICTED: uncharacterized protein LOC104112394 [Nicotiana tomentosiformis] ref|
JMFN005N09Sequence602002801 (6)ref|XP_009620582.1|222PREDICTED: uncharacterized protein LOC104112394 [Nicotiana tomentosiformis] ref|
JMFN011K04Sequence620002801 (6)ref|XP_009620582.1|219PREDICTED: uncharacterized protein LOC104112394 [Nicotiana tomentosiformis] ref|
JMSF014D13Sequence401002801 (6)ref|XP_009620582.1|194PREDICTED: uncharacterized protein LOC104112394 [Nicotiana tomentosiformis] ref|605002801 (6)ref|XP_009620582.1|222PREDICTED: uncharacterized protein LOC104112394 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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rJMFF007B22-                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMFF007B22-          TTTGGGAGAGAGGTGATGCATGCAAACTCATTATATTACTATTGTACTATTGCAGGTATT
                      ____________________________________________________________
consensus             TTTGGGAGAGAGGTGATGCATGCAAACTCATTATATTACTATTGTACTATTGCAGGTATT
 
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rJMFF007B22-          ATTGTTCAAAAAATTTCTAAGGGAAACACTTCATTTACCATCCCATTATAACCAATGGGT
JMFN005N09+                                                  ATCCCATTATAACCAATGAGT
JMFN011K04+                                    ACACTTCATTTACCATCCCATTATAACCAATGGGT
JMFF007B22+                                                                      T
rJMSF014D13-                                                                    GT
                      ____________________________________________________________
consensus             ATTGTTCAAAAAATTTCTAAGGGAAACACTTCATTTACCATCCCATTATAACCAATGGGT
 
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rJMFF007B22-          TCCAATTACAAATGTTTTGAACTTGATTATATGAGAAAGAACAGTTGAACTGAAACAAGA
JMFN005N09+           TCCAATTACAAATGTTTTGAACTTGATTATATGAGAAAGAACAGTTGAACTGAAACAAGA
JMFN011K04+           TCCAATTACAAATGTTTTGAACTTGATTATATGAGAAAGAACAGTTGAACTGAAACAAGA
JMFF007B22+           TCCAATTACAAATGTTTTGAACTTGATTATATGAGAAAGAACAGTTGAACTGAAACAAGA
rJMSF014D13-          TCCAATTACAAATGTTTTGAACTTGATTATATGAGAAAGAACAGTTGAACTGAAACAAGA
                      ____________________________________________________________
consensus             TCCAATTACAAATGTTTTGAACTTGATTATATGAGAAAGAACAGTTGAACTGAAACAAGA
 
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rJMFF007B22-          -GGCAGGATACAATGGCATAAACTGCAGACAAATAGGCTGACACCTCCACTTTATTAGCA
JMFN005N09+           -GGCAGGATACAATGGCATAAACTGCAGACAAATAGGCTGACACCTCCACTTTATTAGCA
JMFN011K04+           -GGCAGGATACAATGGCATAAACTGCAGACAAATAGGCTGACACCTCCACTTTATTAGCA
JMFF007B22+           GGGCAGGATACAATGGCATAAACTGCAGACAAATAGGCTGACACCTCCACTTTATTAGCA
rJMSF014D13-          -GGCAGGATACAATGGCATAAACTGCAGACAAATAGGCTGACACCTCCACTTTATTAGCA
                      ____________________________________________________________
consensus             -GGCAGGATACAATGGCATAAACTGCAGACAAATAGGCTGACACCTCCACTTTATTAGCA
 
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rJMFF007B22-          GCAACAAGAATTTTTGCCTTCAAATTGCAAGCCTCATTTTTGATAGCCTCCGCCTATGGC
JMFN005N09+           GCAACAAGAATTTTTGCCTTCAAATTGCAAGCCTCATTTTTGATAGCCTCCGCCTATGGC
JMFN011K04+           GCAACAAGAATTTTTGCCTTCAAATTGCAAGCCTCATTTTTGATAGCCTCCGCCTATGGC
JMFF007B22+           GCAACAAGAATTTTTGCCTTCAAATTGCAAGCCTCATTTTTGATAGCCTCCGCCTATGGC
rJMSF014D13-          GCAACAAGAATTTTTGCCTTCAAATTGCAAGCCTCATTTTTGATAGCCTCCGCCTATGGC
                      ____________________________________________________________
consensus             GCAACAAGAATTTTTGCCTTCAAATTGCAAGCCTCATTTTTGATAGCCTCCGCCTATGGC
 
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rJMFF007B22-          GTTTTCGTCCTCCTGAACCTTAGCAGTCAAGTAAGGTTTGGGGAAATCGTTGACATCAAA
JMFN005N09+           GTTTTCGTCCTCCTGAACCTTAGCAGTCAAGTAAGGTTTGGGGAAATCGTTGACATCAAA
JMFN011K04+           GTTTTCGTCCTCCTGAACCTTAGCAGTCAAGTAAGGTTTGGGGAAATCGTTGACATCAAA
JMFF007B22+           GTTTTCGTCCTCCTGAACCTTAGCAGTCAAGTAAGGTTTGGGGAAATCGTTGACATCAAA
JMSF014D13+                              TTAGCAGTCAAGTAAGGTTTGGGGAAATCGTTGACATCAAA
rJMSF014D13-          GTTTTCGTCCTCCTGAACCTTAGCAGTCAAGTAAGGTTTGGGGAAATCGTTGACATCAAA
                      ____________________________________________________________
consensus             GTTTTCGTCCTCCTGAACCTTAGCAGTCAAGTAAGGTTTGGGGAAATCGTTGACATCAAA
 
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rJMFF007B22-          TGTTTGCTCCGCCATCATCTTCTGGATATCGGCCTTCTTCAGGACGGTGCGTTTGATAGG
JMFN005N09+           TGTTTGCTCCGCCATCATCTTCTGGATATCGGCCTTCTTCAGGACGGTGCGTTTGATAGG
JMFN011K04+           TGTTTGCTCCGCCATCATCTTCTGGATATCGGCCTTCTTCAGGACGGTGCGTTTGATAGG
JMFF007B22+           TGTTTGCTCCGCCATCATCTTCTGGATATCGGCCTTCTTCAGGACGGTGCGTTTGATAGG
JMSF014D13+           TGTTTGCTCCGCCATCATCTTCTGGATATCGGCCTTCTTCAGGACGGTGCGTTTGATAGG
rJMSF014D13-          TGTTTGCTCCGCCATCATCTTCTGGATATCGGCCTTCTTCAGGACGGTGCGTTTGATAGG
                      ____________________________________________________________
consensus             TGTTTGCTCCGCCATCATCTTCTGGATATCGGCCTTCTTCAGGACGGTGCGTTTGATAGG
 
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rJMFF007B22-          AGGGCGGTTGCGGCGCTGATCTCGAGAGAAGTATTTGATGTCGTAGACGGTTTCGGGATT
JMFN005N09+           AGGGCGGTTGCGGCGCTGATCTCGAGAGAAGTATTTGATGTCGTAGACGGTTTCGGGATT
JMFN011K04+           AGGGCGGTTGCGGCGCTGATCTCGAGAGAAGTATTTGATGTCGTAGACGGTTTCGGGATT
JMFF007B22+           AGGGCGGTTGCGGCGCTGATCTCGAGAGAAGTATTTGATGTCGTAGACGGTTTCGGGATT
JMSF014D13+           AGGGCGGTTGCGGCGCTGATCTCGAGAGAAGTATTTGATGTCGTAGACGGTTTCGGGATT
rJMSF014D13-          AGGGCGGTTGCGGCGCTGATCTCGAGAGAAGTATTTGATGTCGTAGACGGTTTCGGGATT
                      ____________________________________________________________
consensus             AGGGCGGTTGCGGCGCTGATCTCGAGAGAAGTATTTGATGTCGTAGACGGTTTCGGGATT
 
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rJMFF007B22-          AGATGTAGGCACGATGGCCTTAGCCGGTTCGGTGGCGGGGCAGAAAACACGATACTCCGT
JMFN005N09+           AGATGTAGGCACGATGGCCTTAGCCGGTTCGGTGGCGGGGCAGAAAACACGATACTCCGT
JMFN011K04+           AGATGTAGGCACGATGGCCTTAGCCGGTTCGGTGGCGGGGCAGAAAACACGATACTCCGT
JMFF007B22+           AGATGTAGGCACGATGGCCTTAGCCGGTTCGGTGGCGGGGCAGAAAACACGATACTCCGT
JMSF014D13+           AGATGTAGGCACGATGGCCTTAGCCGGTTCGGTGGCGGGGCAGAAAACACGATACTCCGT
rJMSF014D13-          AGATGTAGGCACGATGGCCTTAGCCGGTTCGGTGGCGGGGCAGAAAACACGATACTCCGT
                      ____________________________________________________________
consensus             AGATGTAGGCACGATGGCCTTAGCCGGTTCGGTGGCGGGGCAGAAAACACGATACTCCGT
 
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rJMFF007B22-          CGCCTTTGGGACGGCGGACAAGTACTCCGGGCTCGTTTGAGGCCCGGTGTAGTTCCACGG
JMFN005N09+           CGCCTTTGGGACGGCGGACAAGTACTCCGGGCTCGTTTGAGGCCCGGTGTAGTTCCACGG
JMFN011K04+           CGCCTTTGGGACGGCGGACAAGTACTCCGGGCTCGTTTGAGGCCCGGTGTAGTTCCACGG
JMFF007B22+           CGCCTTTGGGACGGCGGACAAGTACTCCGGGCTCGTTTGAGGCCCGGTGTAGTTCCACGG
JMSF014D13+           CGCCTTTGGGACGGCGGACAAGTACTCCGGGCTCGTTTGAGGCCCGGTGTAGTTCCACGG
rJMSF014D13-          CGCCTTTGGGACGGCGGACAAGTACTCCGGGCTCGTTTGAGGCCCGGTGTAGTTCCACGG
                      ____________________________________________________________
consensus             CGCCTTTGGGACGGCGGACAAGTACTCCGGGCTCGTTTGAGGCCCGGTGTAGTTCCACGG
 
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rJMFF007B22-          GGCCTTGATGTAGCGCTTTAGGGTCTGTAATAGTGATTTTCCGTTCGATGCCATGGCGAC
JMFN005N09+           GGCCTTGATGTAGCGCTTTAGGGTCTGTAATAGTGATTTTCCGTTCGATGCCATGGCGAC
JMFN011K04+           GGCCTTGATGTAGCACTTTAGGGTCTGTAATAGTGATTTTCCGTTCGATGCCATGGCGAC
JMFF007B22+           GGCCTTGATGTAGCGCTTTAGGGTCTGTAATAGTGATTTTCCGTTCGATGCCATGGCGAC
JMSF014D13+           GGCCTTGATGTAGCGCTTTAGGGTCTGTAATAGTGATTTTCCGTTCGATGCCATGGCGAC
rJMSF014D13-          GGCCTTGATGTAGCGCTTTAGGGTCTGTAATAGTGATTTTCCGTTCGATGCCATGGCGAC
                      ____________________________________________________________
consensus             GGCCTTGATGTAGCGCTTTAGGGTCTGTAATAGTGATTTTCCGTTCGATGCCATGGCGAC
 
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rJMFF007B22-          GACGA                                                       
JMFN005N09+           GACGACGACGACGACGACGACGGTGACGGTGGTGATTGACGA                  
JMFN011K04+           GACGACGACGACGACGACGACGGTGACGGTGGTGATTGACGAGATC              
JMFF007B22+           GACGACGACGACGACGACGACGGTGACGGTGGTGATTGACGAGATCTATCCTCCTCTT  
JMSF014D13+           GACGACGACGACGACGACGACGGTGACGGTGGTGATTGACGAGATCTATCCTCCTCTT  
rJMSF014D13-          GACGACGACGACGACGACGACGGTGACGGTGGTGATTGACGAGATCTATCCTCCTCTTCC
                      ____________________________________________________________
consensus             GACGACGACGACGACGACGACGGTGACGGTGGTGATTGACGAGATCTATCCTCCTCTTCC