Contig 002799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN043L14Sequence548002799 (2)ref|XP_004232315.1|6e-08PREDICTED: cysteine-rich receptor-like protein kinase 42 [Solanum lycopersicum]
JMSF013L04Sequence508016729ref|XP_006338584.1|7e-13PREDICTED: cysteine-rich receptor-like protein kinase 42-like [Solanum tuberosu715002799 (2)ref|XP_004232315.1|3e-66PREDICTED: cysteine-rich receptor-like protein kinase 42 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN043L14+ GTTATCTAATAATGGTTTCTTTTTTTTTTTTA
                      ____________________________________________________________
consensus GTTATCTAATAATGGTTTCTTTTTTTTTTTTA
 
. : . : . : . : . : . :
JMFN043L14+ ATAAATAAAAAACCTTTAACAATTTTAGTAAAACAATCTGAAAAAGAAAATATCTGTCTG
                      ____________________________________________________________
consensus ATAAATAAAAAACCTTTAACAATTTTAGTAAAACAATCTGAAAAAGAAAATATCTGTCTG
 
. : . : . : . : . : . :
JMFN043L14+ ACTGTCTCAGTCTAGTTGCTGTAATGGTAATCTATACAAAAAATTTCACAATCTTTCTTT
                      ____________________________________________________________
consensus ACTGTCTCAGTCTAGTTGCTGTAATGGTAATCTATACAAAAAATTTCACAATCTTTCTTT
 
. : . : . : . : . : . :
JMFN043L14+ CTGTTAAAGCTTTTATACATAGGAATCACACTGAGAACTCTTCACAAGGCCTGTATTTCT
rJMSF013L04- AAGCTTTTATACATAGGAATCACACTGAGAACTCTTCACAAGGCCTGTATTTCT
                      ____________________________________________________________
consensus CTGTTAAAGCTTTTATACATAGGAATCACACTGAGAACTCTTCACAAGGCCTGTATTTCT
 
. : . : . : . : . : . :
JMFN043L14+ TTCACATTTTCTGCGTTATGAGTTTGGTCTTTCTATCCTATCCAGGGAAACGACAAAGGC
rJMSF013L04- TTCACATTTTCTGCGTTATGAGTTTGGTCTTTCTATCCTATCCAGGGAAACGACAAAGGC
                      ____________________________________________________________
consensus TTCACATTTTCTGCGTTATGAGTTTGGTCTTTCTATCCTATCCAGGGAAACGACAAAGGC
 
. : . : . : . : . : . :
JMFN043L14+ TTTCCATCAAAATGGCCAGCGAGATCGAGTGTAGAATGCAGGACTTTGAACCCTAATGAT
rJMSF013L04- TTTCCATCAAAATGGCCAGCGAGATCGAGTGTAGAATGCAGGACTTTGAACCCTAATGAT
                      ____________________________________________________________
consensus TTTCCATCAAAATGGCCAGCGAGATCGAGTGTAGAATGCAGGACTTTGAACCCTAATGAT
 
. : . : . : . : . : . :
JMFN043L14+ GTCGAAACTCCTCGCTTCTAAGTCCATCAGAAGTACTCTGCATGCTAGAGGATTGGTCTG
rJMSF013L04- GTCGAAACTCCTCGCTTCTAAGTCCATCAGAAGTACTCTGCATGCTAGAGGATTGGTCTG
                      ____________________________________________________________
consensus GTCGAAACTCCTCGCTTCTAAGTCCATCAGAAGTACTCTGCATGCTAGAGGATTGGTCTG
 
. : . : . : . : . : . :
JMFN043L14+ TGGTGGAAGTGTAGGAAGACCCGTCCTGTTTGTTCAGCGCGTTTGATACCAACGATTTGA
rJMSF013L04- TGGTGGAAGTGTAGGAAGACCCGTCCTGTTTGTTCAGCGCGTTTGATACCAACGATTTGA
                      ____________________________________________________________
consensus TGGTGGAAGTGTAGGAAGACCCGTCCTGTTTGTTCAGCGCGTTTGATACCAACGATTTGA
 
. : . : . : . : . : . :
JMFN043L14+ TGCTACTCATGGAGCCGCCTGCCAGTACGCTGGAGTTGATGAAGGGGGGCTGTGTTGGTT
rJMSF013L04- TGCTACTCATGGAGCCGCCTGCCAGTACGCTGGAGTTGATGAAGGGGGGCTGTGTTGGTT
                      ____________________________________________________________
consensus TGCTACTCATGGAGCCGCCTGCCAGTACGCTGGAGTTGATGAAGGGGGGCTGTGTTGGTT
 
. : . : . : . : . : . :
JMFN043L14+ CAGGGATTTCGCGATCTTCGATTGTTAGCATCTCCA
rJMSF013L04- CAGGGATTTCGCGATCTTCGATTGTTAGCATCTCCACAACTTCAGACATGGATGGTCTTA
                      ____________________________________________________________
consensus CAGGGATTTCGCGATCTTCGATTGTTAGCATCTCCACAACTTCAGACATGGATGGTCTTA
 
. : . : . : . : . : . :
rJMSF013L04- AAGCAGGAATTGCCTGGCAGCATAGTAGCCCAACCTGAACCACTTTAGATGCCTCATTTG
                      ____________________________________________________________
consensus AAGCAGGAATTGCCTGGCAGCATAGTAGCCCAACCTGAACCACTTTAGATGCCTCATTTG
 
. : . : . : . : . : . :
rJMSF013L04- CATTAAAATCGCCTTCGAGAGAAGGGTCTACTATTTCAAAGGACCGATCAGTTCTGTAAA
                      ____________________________________________________________
consensus CATTAAAATCGCCTTCGAGAGAAGGGTCTACTATTTCAAAGGACCGATCAGTTCTGTAAA
 
. : . : . : . : . : . :
rJMSF013L04- GCCTCCATACTGTTTGCAGTAGCGAGCCAGAGTCATCTGCAAAGGCATTGCTTTTCCTAC
                      ____________________________________________________________
consensus GCCTCCATACTGTTTGCAGTAGCGAGCCAGAGTCATCTGCAAAGGCATTGCTTTTCCTAC
 
. : . : . : . : . : . :
rJMSF013L04- CAGATACCATCTCAAGAACAAGCACACCGAAGCTATAGACATCAGCCTTCTCTGTGAGCT
                      ____________________________________________________________
consensus CAGATACCATCTCAAGAACAAGCACACCGAAGCTATAGACATCAGCCTTCTCTGTGAGCT
 
. : . : . : . : . : . :
rJMSF013L04- GTCCTCGGACAAGGTATTCCGGAGCCATATATCCTAGTGTCCCGGCAATGCCAGTGCTGA
                      ____________________________________________________________
consensus GTCCTCGGACAAGGTATTCCGGAGCCATATATCCTAGTGTCCCGGCAATGCCAGTGCTGA