Contig 002799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN043L14Sequence548002799 (2)ref|XP_004232315.1|6e-08PREDICTED: cysteine-rich receptor-like protein kinase 42 [Solanum lycopersicum]
JMSF013L04Sequence508016729ref|XP_006338584.1|7e-13PREDICTED: cysteine-rich receptor-like protein kinase 42-like [Solanum tuberosu715002799 (2)ref|XP_004232315.1|3e-66PREDICTED: cysteine-rich receptor-like protein kinase 42 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN043L14+                                       GTTATCTAATAATGGTTTCTTTTTTTTTTTTA
                      ____________________________________________________________
consensus                                         GTTATCTAATAATGGTTTCTTTTTTTTTTTTA
 
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JMFN043L14+           ATAAATAAAAAACCTTTAACAATTTTAGTAAAACAATCTGAAAAAGAAAATATCTGTCTG
                      ____________________________________________________________
consensus             ATAAATAAAAAACCTTTAACAATTTTAGTAAAACAATCTGAAAAAGAAAATATCTGTCTG
 
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JMFN043L14+           ACTGTCTCAGTCTAGTTGCTGTAATGGTAATCTATACAAAAAATTTCACAATCTTTCTTT
                      ____________________________________________________________
consensus             ACTGTCTCAGTCTAGTTGCTGTAATGGTAATCTATACAAAAAATTTCACAATCTTTCTTT
 
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JMFN043L14+           CTGTTAAAGCTTTTATACATAGGAATCACACTGAGAACTCTTCACAAGGCCTGTATTTCT
rJMSF013L04-                AAGCTTTTATACATAGGAATCACACTGAGAACTCTTCACAAGGCCTGTATTTCT
                      ____________________________________________________________
consensus             CTGTTAAAGCTTTTATACATAGGAATCACACTGAGAACTCTTCACAAGGCCTGTATTTCT
 
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JMFN043L14+           TTCACATTTTCTGCGTTATGAGTTTGGTCTTTCTATCCTATCCAGGGAAACGACAAAGGC
rJMSF013L04-          TTCACATTTTCTGCGTTATGAGTTTGGTCTTTCTATCCTATCCAGGGAAACGACAAAGGC
                      ____________________________________________________________
consensus             TTCACATTTTCTGCGTTATGAGTTTGGTCTTTCTATCCTATCCAGGGAAACGACAAAGGC
 
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JMFN043L14+           TTTCCATCAAAATGGCCAGCGAGATCGAGTGTAGAATGCAGGACTTTGAACCCTAATGAT
rJMSF013L04-          TTTCCATCAAAATGGCCAGCGAGATCGAGTGTAGAATGCAGGACTTTGAACCCTAATGAT
                      ____________________________________________________________
consensus             TTTCCATCAAAATGGCCAGCGAGATCGAGTGTAGAATGCAGGACTTTGAACCCTAATGAT
 
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JMFN043L14+           GTCGAAACTCCTCGCTTCTAAGTCCATCAGAAGTACTCTGCATGCTAGAGGATTGGTCTG
rJMSF013L04-          GTCGAAACTCCTCGCTTCTAAGTCCATCAGAAGTACTCTGCATGCTAGAGGATTGGTCTG
                      ____________________________________________________________
consensus             GTCGAAACTCCTCGCTTCTAAGTCCATCAGAAGTACTCTGCATGCTAGAGGATTGGTCTG
 
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JMFN043L14+           TGGTGGAAGTGTAGGAAGACCCGTCCTGTTTGTTCAGCGCGTTTGATACCAACGATTTGA
rJMSF013L04-          TGGTGGAAGTGTAGGAAGACCCGTCCTGTTTGTTCAGCGCGTTTGATACCAACGATTTGA
                      ____________________________________________________________
consensus             TGGTGGAAGTGTAGGAAGACCCGTCCTGTTTGTTCAGCGCGTTTGATACCAACGATTTGA
 
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JMFN043L14+           TGCTACTCATGGAGCCGCCTGCCAGTACGCTGGAGTTGATGAAGGGGGGCTGTGTTGGTT
rJMSF013L04-          TGCTACTCATGGAGCCGCCTGCCAGTACGCTGGAGTTGATGAAGGGGGGCTGTGTTGGTT
                      ____________________________________________________________
consensus             TGCTACTCATGGAGCCGCCTGCCAGTACGCTGGAGTTGATGAAGGGGGGCTGTGTTGGTT
 
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JMFN043L14+           CAGGGATTTCGCGATCTTCGATTGTTAGCATCTCCA                        
rJMSF013L04-          CAGGGATTTCGCGATCTTCGATTGTTAGCATCTCCACAACTTCAGACATGGATGGTCTTA
                      ____________________________________________________________
consensus             CAGGGATTTCGCGATCTTCGATTGTTAGCATCTCCACAACTTCAGACATGGATGGTCTTA
 
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rJMSF013L04-          AAGCAGGAATTGCCTGGCAGCATAGTAGCCCAACCTGAACCACTTTAGATGCCTCATTTG
                      ____________________________________________________________
consensus             AAGCAGGAATTGCCTGGCAGCATAGTAGCCCAACCTGAACCACTTTAGATGCCTCATTTG
 
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rJMSF013L04-          CATTAAAATCGCCTTCGAGAGAAGGGTCTACTATTTCAAAGGACCGATCAGTTCTGTAAA
                      ____________________________________________________________
consensus             CATTAAAATCGCCTTCGAGAGAAGGGTCTACTATTTCAAAGGACCGATCAGTTCTGTAAA
 
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rJMSF013L04-          GCCTCCATACTGTTTGCAGTAGCGAGCCAGAGTCATCTGCAAAGGCATTGCTTTTCCTAC
                      ____________________________________________________________
consensus             GCCTCCATACTGTTTGCAGTAGCGAGCCAGAGTCATCTGCAAAGGCATTGCTTTTCCTAC
 
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rJMSF013L04-          CAGATACCATCTCAAGAACAAGCACACCGAAGCTATAGACATCAGCCTTCTCTGTGAGCT
                      ____________________________________________________________
consensus             CAGATACCATCTCAAGAACAAGCACACCGAAGCTATAGACATCAGCCTTCTCTGTGAGCT
 
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rJMSF013L04-          GTCCTCGGACAAGGTATTCCGGAGCCATATATCCTAGTGTCCCGGCAATGCCAGTGCTGA
                      ____________________________________________________________
consensus             GTCCTCGGACAAGGTATTCCGGAGCCATATATCCTAGTGTCCCGGCAATGCCAGTGCTGA