Contig 002796:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002O18+                                           TCCTACAGACNAAGGATACACTTGCAA
rJMSF028G19+                                                        GGATACACTTGCCA
                      ____________________________________________________________
consensus                                              TCCTACAGACNAAGGATACACTTGCCA
 
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rJMSF002O18+          CCACTGAGGAGCCTGCTCCATTCCAGAATTACTCATCAAGGTTAGCTGCTCTGGACTATA
rJMSF028G19+          CCACTGAGGAGCTTGCTCCATTCCAGAATTACTCATCAAGGTTAGCTGCTCTGGACTATA
                      ____________________________________________________________
consensus             CCACTGAGGAGCTTGCTCCATTCCAGAATTACTCATCAAGGTTAGCTGCTCTGGACTATA
 
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rJMSF002O18+          TGGTATGCTTGTTTAGCGAAGTGTTTGTCACTACTCAAGGAGGAAACTTCCCTCATTTTT
rJMSF028G19+          TGGTATGCTTGTTTAGCGAAGTGTTTGTCACTACTCAAGGAGGAAACTTCCCTCATTTTT
                      ____________________________________________________________
consensus             TGGTATGCTTGTTTAGCGAAGTGTTTGTCACTACTCAAGGAGGAAACTTCCCTCATTTTT
 
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rJMSF002O18+          TGATTGGTCATCGGAGATATCTCTATAATGGGCATGCCAAAACTATTAAACCAGACAAAA
rJMSF028G19+          TGATTGGTCATCGGAGATATCTCTATAATGGGCATGCCAAAACTATTAAACCAGACAAAA
                      ____________________________________________________________
consensus             TGATTGGTCATCGGAGATATCTCTATAATGGGCATGCCAAAACTATTAAACCAGACAAAA
 
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rJMSF002O18+          TCAAGCTTGTCGCTTTACTACAGAACACAAGCATAAGTTGGAATGATTTCAAAGATCAGA
rJMSF028G19+          TCAAGCTTGTCGCTTTACTACAGAACACAAGCATAAGTTGGAATGATTTCAAAGATCAGA
                      ____________________________________________________________
consensus             TCAAGCTTGTCGCTTTACTACAGAACACAAGCATAAGTTGGAATGATTTCAAAGATCAGA
 
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rJMSF002O18+          TGGGATCAATGCTAGCTGAGAGTGATCGCAATAGCATCTTAGTACCGAGAGTGAAGAAGT
rJMSF028G19+          TGGGATCAATGCTAGCTGAGAGTGATCGCAATAGCATCTTAGTACCGAGAGTGAAGAAGT
                      ____________________________________________________________
consensus             TGGGATCAATGCTAGCTGAGAGTGATCGCAATAGCATCTTAGTACCGAGAGTGAAGAAGT
 
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rJMSF002O18+          CTTCAAGAAAGGATTCAATCTACTCAAATCCTCTGCCCGAATGCAGTTGTCTCTGGGAAT
rJMSF028G19+          CTTCAAGAAAGGATTCAATCTACTCAAATCCTCTGCCCGAATGCAGTTGTCTCTGGGAAT
                      ____________________________________________________________
consensus             CTTCAAGAAAGGATTCAATCTACTCAAATCCTCTGCCCGAATGCAGTTGTCTCTGGGAAT
 
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rJMSF002O18+          CACACAGGTCAAACGCTCTAAAGGGTTCATACCTCATGGTAAATCAATGATTCTCATCCT
rJMSF028G19+          CACACAGGTCAAACGCTCTAAAGGGTTCATACCTCATGGTAAATCAATGATTCTCATCCT
                      ____________________________________________________________
consensus             CACACAGGTCAAACGCTCTAAAGGGTTCATACCTCATGGTAAATCAATGATTCTCATCCT
 
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rJMSF002O18+          ATGAACATCAGCATTTGTTTATTTATGCTTTCTCCAGGTAGTGTTAATTGCTATCTCGTG
rJMSF028G19+          ATGAACATCAGCATTTGTTTATTTATGCTTTCTCCAGGTAGTGTTAATTGCTATCTCGTG
                      ____________________________________________________________
consensus             ATGAACATCAGCATTTGTTTATTTATGCTTTCTCCAGGTAGTGTTAATTGCTATCTCGTG
 
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rJMSF002O18+          TGTCTCTGTTGAAAGTCATGAACACAATACACAGATAACTGTTTGGGTGTGACTGACGCA
rJMSF028G19+          TGTCTCTGTTGAAAGTCATGAACACAATACACAGATAACTGTTTGGGTGTGACTGACGCA
rJMSF013C14+                     AAAGTCATGAACNCCATACACAGATAACTGTTTGGGTGTGACTGACGCA
                      ____________________________________________________________
consensus             TGTCTCTGTTGAAAGTCATGAACACAATACACAGATAACTGTTTGGGTGTGACTGACGCA
 
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rJMSF002O18+          TAGTGCAAGGCAATTCTCCGGGCACTAATTTAAGATAAGATCTATGAAACATACCCTCCT
rJMSF028G19+          TAGTGCAAGGCAATTCTCCGGGCACTAATTTAAGATAAGATCTATGAAACATACCCTCCT
rJMSF013C14+          TAGTGCAAGGCAATTCTCCGGGCACTAATTTAAGATAAGATCTATGAAACATACCCTCCT
                      ____________________________________________________________
consensus             TAGTGCAAGGCAATTCTCCGGGCACTAATTTAAGATAAGATCTATGAAACATACCCTCCT
 
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rJMSF002O18+          TATAGGTTTTCTAAAATTAGAGATATTGGTTTGTCTCAATAGATGAGAATATGATGTTTC
rJMSF028G19+          TATAGGTTTTCTAAAATTAGAGATATTGGTTTGTCTCAATAGATGAGAATATGATGTTTC
rJMSF013C14+          TATAGGTTTTCTAAAATTAGAGATATTGGTTTGTCTCAATAGATGAGAATATGATGTTTC
                      ____________________________________________________________
consensus             TATAGGTTTTCTAAAATTAGAGATATTGGTTTGTCTCAATAGATGAGAATATGATGTTTC
 
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rJMSF002O18+          TCCTAGTGGAGATTGCAGAGGGAGGAATATTTCAAGGTCTGAACATTCGTATTTCCTTCA
rJMSF028G19+          TCCTAGTGGAGATTGCAGAGGGAGGAATATTTCAAGGTCTGAACATTCGTATTTCCTTCA
rJMSF013C14+          TCCTAGTGGAGATTGCAGAGGGAGGAATATTTCAAGGTCTGAACATTCGTATTTCCTTCA
                      ____________________________________________________________
consensus             TCCTAGTGGAGATTGCAGAGGGAGGAATATTTCAAGGTCTGAACATTCGTATTTCCTTCA
 
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rJMSF002O18+          CTGCAAAACTT                                                 
rJMSF028G19+          CTGCAAAACTT                                                 
rJMSF013C14+          CTGCAAAACTTTGCGCAGTTTAAGAATATGAAATTCGGGTAGATTGTATTGTTAGAAGTT
                      ____________________________________________________________
consensus             CTGCAAAACTTTGCGCAGTTTAAGAATATGAAATTCGGGTAGATTGTATTGTTAGAAGTT
 
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rJMSF013C14+          TTTACTCTTCTTTTCTTTTTATTTAGTAGTATATTTCAAATAGTGTTTGTTCATGAATTG
                      ____________________________________________________________
consensus             TTTACTCTTCTTTTCTTTTTATTTAGTAGTATATTTCAAATAGTGTTTGTTCATGAATTG
 
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rJMSF013C14+          TTTAAGTAATTTTTGTTACTTTTCAAGCCAACGTCAATGACTACATATTTTGGTTATCTT
                      ____________________________________________________________
consensus             TTTAAGTAATTTTTGTTACTTTTCAAGCCAACGTCAATGACTACATATTTTGGTTATCTT
 
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rJMSF013C14+          TGATTTTGGAGATTTTATATTGGGAATATATTCAAGTTTTGGTTCCTCTCGCAGATGATG
                      ____________________________________________________________
consensus             TGATTTTGGAGATTTTATATTGGGAATATATTCAAGTTTTGGTTCCTCTCGCAGATGATG
 
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rJMSF013C14+          GAGGTGAAATAGCGATATCATTTTAATTTGTTTTGGTATTTTAATTGGCTCGGATAAAAG
                      ____________________________________________________________
consensus             GAGGTGAAATAGCGATATCATTTTAATTTGTTTTGGTATTTTAATTGGCTCGGATAAAAG
 
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rJMSF013C14+          AAGCAAATTAACCAAAATTTGAAATCTTGAGAATTGATGGGGATATGAGTTATGGGCTGA
                      ____________________________________________________________
consensus             AAGCAAATTAACCAAAATTTGAAATCTTGAGAATTGATGGGGATATGAGTTATGGGCTGA
 
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rJMSF013C14+          ACTTGGTGGGCTTGGTCTGATCCAGTAGAAGAAAAGGTGGGTCGAGGGAGGTGAGTCAGG
                      ____________________________________________________________
consensus             ACTTGGTGGGCTTGGTCTGATCCAGTAGAAGAAAAGGTGGGTCGAGGGAGGTGAGTCAGG
 
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rJMSF013C14+          GCACGGATGGGTGTCGGCAAATTATTGTAATGGACCAATGGACCATGGTCAGACCATGAA
                      ____________________________________________________________
consensus             GCACGGATGGGTGTCGGCAAATTATTGTAATGGACCAATGGACCATGGTCAGACCATGAA
 
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rJMSF013C14+          TATTAGGTACATTTTTAATATATTATAAGTACATATTTTTGTATTGAAGAGACATTATTG
                      ____________________________________________________________
consensus             TATTAGGTACATTTTTAATATATTATAAGTACATATTTTTGTATTGAAGAGACATTATTG