Contig 002793:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN029B04Sequence502002793 (3)ref|XP_009768583.1|1e-39PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nicotiana sylvestris]
JMSF009L05Sequence391000633 (2)ref|XP_009615945.1|2e-13PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nicotiana tomentosifo706002793 (3)ref|XP_009768583.1|5e-11PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nicotiana sylvestris]
JMSF012I12Sequence492000633 (2)ref|XP_009615945.1|2e-40PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nicotiana tomentosifo748002793 (3)ref|XP_007209892.1|2e-05hypothetical protein PRUPE_ppa004048mg [Prunus persica] gb|EMJ11091.1| hypotheti

Alignment

This contig is upended


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JMFN029B04+                             AGAACAACATATGTTGATATTAAATGTTCAATTTATATTTTT
                      ____________________________________________________________
consensus                               AGAACAACATATGTTGATATTAAATGTTCAATTTATATTTTT
 
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JMFN029B04+           TCATCATTTTAGGTTCGTCATTGCCCCAATTTTTACAATTGTAGTTTGGCGATGGAAGTT
                      ____________________________________________________________
consensus             TCATCATTTTAGGTTCGTCATTGCCCCAATTTTTACAATTGTAGTTTGGCGATGGAAGTT
 
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JMFN029B04+           GATGACAATGGTCAAGAAATTGCTGTTGTCTAGTTCACCGAAGATGATCAGGGTCTGGCA
                      ____________________________________________________________
consensus             GATGACAATGGTCAAGAAATTGCTGTTGTCTAGTTCACCGAAGATGATCAGGGTCTGGCA
 
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JMFN029B04+           ACTGGACAGTTTGCTGCATTCTATGATGGGAGGGCTTGTATTGGCTCTGGCGTGATCTTG
                      ____________________________________________________________
consensus             ACTGGACAGTTTGCTGCATTCTATGATGGGAGGGCTTGTATTGGCTCTGGCGTGATCTTG
 
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JMFN029B04+           GAGTCTTGGGACGATCAAGGATATCCTGTTTGCGAGAGGGCTCTTGAAATAGCAAGGATG
rJMSF009L05+                    ACGATCAAGGATATCCTGTTTGCGAGAGGGCTCTTGAAATAGCAAGAATG
rJMSF012I12+                                          CGAGAGGGCTCTTGAAATAGCAAGAATG
                      ____________________________________________________________
consensus             GAGTCTTGGGACGATCAAGGATATCCTGTTTGCGAGAGGGCTCTTGAAATAGCAAGAATG
 
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JMFN029B04+           GAGGATAAGTCCATGCTTG                                         
rJMSF009L05+          GAGGATAAGTCCATGCTTGGTAAACCTGTGAAAATAATGGTTAAACCGGAAAATAGTCTA
rJMSF012I12+          GAGGATAAGTCCATGCTTGGTAAACCTGTGAAAATAATGGTTAAACCGGAAAATAGTCTA
                      ____________________________________________________________
consensus             GAGGATAAGTCCATGCTTGGTAAACCTGTGAAAATAATGGTTAAACCGGAAAATAGTCTA
 
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rJMSF009L05+          AAAGAATCCCATCACAAAGATCAAAGTAAGAATCCTGAACCCATTGATTCTGAAATTACA
rJMSF012I12+          AAAGAATCCCATCACAAAGATCAAAGTAAGAATCCTGAACCCATTGATTCTGAAATTACA
                      ____________________________________________________________
consensus             AAAGAATCCCATCACAAAGATCAAAGTAAGAATCCTGAACCCATTGATTCTGAAATTACA
 
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rJMSF009L05+          TCCCAGAATATGACAACAATTCCCCATCAAGAAGAGAACCCCAGAGAATTAAATTTGCTG
rJMSF012I12+          TCCCAGAATATGACAACAATTCCCCATCAAGAAGAGAACCCCAGAGAATTAAATTTGCTG
                      ____________________________________________________________
consensus             TCCCAGAATATGACAACAATTCCCCATCAAGAAGAGAACCCCAGAGAATTAAATTTGCTG
 
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rJMSF009L05+          GAGTGGCTAAAACAGAAGTTGTTACAAGTTTTCTAGGATGTGTATATATATACCTACGAT
rJMSF012I12+          GAGTGGCTAAAACAGAAGTTGTTACAAGTTTTCTAGGATGTGTATATATATACCTACGAT
                      ____________________________________________________________
consensus             GAGTGGCTAAAACAGAAGTTGTTACAAGTTTTCTAGGATGTGTATATATATACCTACGAT
 
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rJMSF009L05+          ATATCAAGGTTGATCATGGCACTGACTCAAATTTGCACCTGCCATCTCAAGAAATGGACT
rJMSF012I12+          ATATCAAGGTTGATCATGGCACTGACTCAAATTTGCACCTGCCATCTCAAGAAATGGACT
                      ____________________________________________________________
consensus             ATATCAAGGTTGATCATGGCACTGACTCAAATTTGCACCTGCCATCTCAAGAAATGGACT
 
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rJMSF009L05+          CCTGCACTGGGTAGGAGCCGAAGCATGCTGGTTCAGGAACAACAGGCCGGGCTTTGACTC
rJMSF012I12+          CCTGCACTGGGTAGGAGCCGAAGCATGCTGGTTCAGGAACAACAGGCCGGGCTTTGACTC
                      ____________________________________________________________
consensus             CCTGCACTGGGTAGGAGCCGAAGCATGCTGGTTCAGGAACAACAGGCCGGGCTTTGACTC
 
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rJMSF009L05+          GCTGTACGCCTGTACTGTATTTACCAACACTTCTTGCATTCTTTGATGATTCACCGGCTC
rJMSF012I12+          GCTGTACGCCTGTACTGTATTTACCAACACTTCTTGCATTCTTTGATGATTCACCGGCTC
                      ____________________________________________________________
consensus             GCTGTACGCCTGTACTGTATTTACCAACACTTCTTGCATTCTTTGATGATTCACCGGCTC
 
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rJMSF009L05+          ACCGCCATATTTCACTGCGATTACAGAGATCTTTGG                        
rJMSF012I12+          ACCGCCATATTTCACTGCGATTACAGAGATCTTTGGAGTGCTGGTTTCTCCAGGGAAAAT
                      ____________________________________________________________
consensus             ACCGCCATATTTCACTGCGATTACAGAGATCTTTGGAGTGCTGGTTTCTCCAGGGAAAAT
 
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rJMSF012I12+          GCTGAAGGGTATTGCCCAGCTTGTTGATATGCTTCTTACAAAAATAGAGATAATAAAACA
                      ____________________________________________________________
consensus             GCTGAAGGGTATTGCCCAGCTTGTTGATATGCTTCTTACAAAAATAGAGATAATAAAACA
 
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rJMSF012I12+          ACTCACTTTTACATTTAGTTCTTAACTATTTATGTTCTCGATTATAATGCCACTTTTACA
                      ____________________________________________________________
consensus             ACTCACTTTTACATTTAGTTCTTAACTATTTATGTTCTCGATTATAATGCCACTTTTACA
 
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rJMSF012I12+          CTTAGTCCTTAACTATTTATGTTCTCGATTATAATGTCGCTTTTACATTTAGTCCTTAAT
                      ____________________________________________________________
consensus             CTTAGTCCTTAACTATTTATGTTCTCGATTATAATGTCGCTTTTACATTTAGTCCTTAAT
 
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rJMSF012I12+          TATTTTTCTTCTCGATTATAATGTCGTTTTTACATTTAGTCCTTAACTATCTTGTCTCGA
                      ____________________________________________________________
consensus             TATTTTTCTTCTCGATTATAATGTCGTTTTTACATTTAGTCCTTAACTATCTTGTCTCGA