Contig 002791:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050F21Sequence623007799 (2)ref|XP_009589792.1|2e-87PREDICTED: poly(rC)-binding protein 4-like [Nicotiana tomentosiformis]604002791 (2)ref|XP_009764265.1|1e-12PREDICTED: poly(rC)-binding protein 4-like [Nicotiana sylvestris] ref|XP_0097642
JMSF012A09Sequence216007799 (2)718002791 (2)ref|XP_009764265.1|2e-12PREDICTED: poly(rC)-binding protein 4-like [Nicotiana sylvestris] ref|XP_0097642

Alignment

This contig is upended


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rJMSF012A09+            AAAGCAAAGGATTGATGAATATGTATATTCCCAGCTGATGCTGCAAACTGGTGGCCAG
                      ____________________________________________________________
consensus               AAAGCAAAGGATTGATGAATATGTATATTCCCAGCTGATGCTGCAAACTGGTGGCCAG
 
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rJMFF050F21+                                              CAGTTGCAACAGACAATGCAGCTA
rJMSF012A09+          CAGCTTCAAGAAACAGTGCAGCTACAGCAATCATTACAGTTGCAACAGACAATGCAGCTA
                      ____________________________________________________________
consensus             CAGCTTCAAGAAACAGTGCAGCTACAGCAATCATTACAGTTGCAACAGACAATGCAGCTA
 
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rJMFF050F21+          CAACAGCCAATACCCGATGCATCTGCTTCTCTGTTGCAAGGATATACTCAAGGGCACGGG
rJMSF012A09+          CAACAGCCAATACCCGATGCATCTGCTTCTCTGTTGCAAGGATATACTCAAGGGCACGGG
                      ____________________________________________________________
consensus             CAACAGCCAATACCCGATGCATCTGCTTCTCTGTTGCAAGGATATACTCAAGGGCACGGG
 
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rJMFF050F21+          CTTTATGTTAACAGTAATCAAGGAGGTGCTATGATGGCATCCTACCCACAAGTCTACTCA
rJMSF012A09+          CTTTATGTTAACAGTAATCAAGGAGGTGCTATGATGGCATCCTACCCACAAGTCTACTCA
                      ____________________________________________________________
consensus             CTTTATGTTAACAGTAATCAAGGAGGTGCTATGATGGCATCCTACCCACAAGTCTACTCA
 
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rJMFF050F21+          TCAACCGCAGCCAATCAAGCTCCCGCCTATTATGGTCAGTCATATTATCCCGCCCCTCCA
rJMSF012A09+          TCAACCGCAGCCAATCAAGCTCCCGCCTATTATGGTCAGTCATATTATCCCGCCCCTCCA
                      ____________________________________________________________
consensus             TCAACCGCAGCCAATCAAGCTCCCGCCTATTATGGTCAGTCATATTATCCCGCCCCTCCA
 
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rJMFF050F21+          ATTTAGGCATGGCCATGAGTGTTGCTCTTTAACACCTTCCGCTTTAATCACATGATGGAT
rJMSF012A09+          ATTTAGGCATGGCCATGAGTGTTGCTCTTTAACACCTTCCGCTTTAATCACATGATGGAT
                      ____________________________________________________________
consensus             ATTTAGGCATGGCCATGAGTGTTGCTCTTTAACACCTTCCGCTTTAATCACATGATGGAT
 
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rJMFF050F21+          GTACAAATAGTGAGTTATGCGGTGCTGAAATTACTCTTCCTATGAACTGTGATGTAGCTT
rJMSF012A09+          GTACAAATAGTGAGTTATGCGGTGCTGAAATTACTCTTCCTATGAACTGTGATGTAGCTT
                      ____________________________________________________________
consensus             GTACAAATAGTGAGTTATGCGGTGCTGAAATTACTCTTCCTATGAACTGTGATGTAGCTT
 
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rJMFF050F21+          TTGTATTTTAACGATTGATTTTGATTTTACTTGGTAAAACGTCGTAGGACATAGCCTCTA
rJMSF012A09+          TTGTATTTTAACGATTGATTTTGATTTTACTTGGTAAAACGTCGTAGGACATAGCCTCTA
                      ____________________________________________________________
consensus             TTGTATTTTAACGATTGATTTTGATTTTACTTGGTAAAACGTCGTAGGACATAGCCTCTA
 
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rJMFF050F21+          TTGCCTTGCCTCCTTGTTGAAATGTTGAGAATTAAGTTATTTTCTAGGTTTTCAAATCTC
rJMSF012A09+          TTGCCTTGCCTCCTTGTTGAAATGTTGAGAATTAAGTTATTTTCTAGGTTTTCAAATCTC
                      ____________________________________________________________
consensus             TTGCCTTGCCTCCTTGTTGAAATGTTGAGAATTAAGTTATTTTCTAGGTTTTCAAATCTC
 
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rJMFF050F21+          TTAAACAGTTTGGTCATATCATCCAAGTGAAGTGTATGGTAGGCCTGCGAGTACTTTATT
rJMSF012A09+          TTAAACAGTTTGGTCATATCATCCAAGTGAAGTGTATGGTAGGCCTGCGAGTACTTTATT
                      ____________________________________________________________
consensus             TTAAACAGTTTGGTCATATCATCCAAGTGAAGTGTATGGTAGGCCTGCGAGTACTTTATT
 
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rJMFF050F21+          TAGATAAGATAGCCATGTTTGTATCAGTGCTTGGATTATTATAATTTTAGTGGGAAAATT
rJMSF012A09+          TAGATAAGATAGCCATGTTTGTATCAGTGCTTGGATTATTATAATTTTAGTGGGAAAATT
                      ____________________________________________________________
consensus             TAGATAAGATAGCCATGTTTGTATCAGTGCTTGGATTATTATAATTTTAGTGGGAAAATT
 
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rJMFF050F21+          TTCATATTGATGTAAA                                            
rJMSF012A09+          TTCATATTGATGTAAATGACCAAACTGGGGCTGAGAAATCTCTGAAATTTCTCCCAAATT
                      ____________________________________________________________
consensus             TTCATATTGATGTAAATGACCAAACTGGGGCTGAGAAATCTCTGAAATTTCTCCCAAATT