Contig 002786:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF011H20-                     GTCAATACAATACAATACAGCTCTCACCCAGCCAGCATCCCACTGACTCT
JMSF011G20-                     GTCAATACAATACAATACAGCTCTCACCCAGCCAGCATCCCACTGACTCT
                      ____________________________________________________________
consensus                       GTCAATACAATACAATACAGCTCTCACCCAGCCAGCATCCCACTGACTCT
 
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JMSF011H20-           GTCTTCACAAAACAGCCGATTTCTGCTATTCCATCGGATTTGTTGACCGGTTTTGGGTGA
JMSF011G20-           GTCTTCACAAAACAGCCGATTTCTGCTATTCCATCGGATTTGTTGACCGGTTTTGGGTGA
                      ____________________________________________________________
consensus             GTCTTCACAAAACAGCCGATTTCTGCTATTCCATCGGATTTGTTGACCGGTTTTGGGTGA
 
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JMSF011H20-           GACAATCCGCTTGTTGTGATCACTTCTCTGGACCCAAACTTCCCTTCTTTTCTGAGACGT
JMSF011G20-           GACAATCCGCTTGTTGTGATCACTTCTCTGGACCCAAACTTCCCTTCTTTTCTGAGACGT
                      ____________________________________________________________
consensus             GACAATCCGCTTGTTGTGATCACTTCTCTGGACCCAAACTTCCCTTCTTTTCTGAGACGT
 
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JMSF011H20-           AATGGAGCAAGGAAATATTGATTCCCCAACTGAGGTCACCAGTAAACACATGGGTGTGGT
JMSF011G20-           AATGGAGCAAGGAAATATTGATTCCCCAACTGAGGTCACCAGTAAACACATGGGTGTGGT
                      ____________________________________________________________
consensus             AATGGAGCAAGGAAATATTGATTCCCCAACTGAGGTCACCAGTAAACACATGGGTGTGGT
 
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JMSF011H20-           GATACATGCCAGCCTTGCTTGCTTGAACAAGAAAAGGAAGCTTAGAGCTGAACAACTGGG
JMSF011G20-           GATACATGCCAGCCTTGCTTGCTTGAACAAGAAAAGGAAGCTTAGAGCTGAACAACTGGG
                      ____________________________________________________________
consensus             GATACATGCCAGCCTTGCTTGCTTGAACAAGAAAAGGAAGCTTAGAGCTGAACAACTGGG
 
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JMSF011H20-           CATGCCTCTGCCAAAGCATATGTGTGCTGATCAAAGCTTTGTTACGAGATATAGCTCGTT
JMSF011G20-           CATGCCTCTGCCAAAGCATATGTGTGCTGATCAAAGCTTTGTTACGAGATATAGCTCGTT
rJMSF011H20+                                                       GAGATATAGCTCGTT
rJMSF011G20+                     CAAAGCATATGTGTGNTGATCAAAGCTTTGTTACGAGATATAGCTCGTT
                      ____________________________________________________________
consensus             CATGCCTCTGCCAAAGCATATGTGTGCTGATCAAAGCTTTGTTACGAGATATAGCTCGTT
 
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JMSF011H20-           AGTTA                                                       
JMSF011G20-           AGTTAACAACCAAGACAATGAACTT                                   
rJMSF011H20+          AGTTAACAACCAAGACAATGAACTTGAAACCCAGTCTGGAAAAGGGAGCAATGGTTTTAT
rJMSF011G20+          AGTTAACAACCAAGACAATGAACTTGAAACCCAGTCTGGAAAAGGGAGCAATGGTTTTAT
                      ____________________________________________________________
consensus             AGTTAACAACCAAGACAATGAACTTGAAACCCAGTCTGGAAAAGGGAGCAATGGTTTTAT
 
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rJMSF011H20+          TGAAGACATTGATTGTGTCATGTCTGGTGAAGCTAAAGTCGATGATCTTGAATTTCTGAA
rJMSF011G20+          TGAAGACATTGATTGTGTCATGTCTGGTGAAGCTAAAGTCGATGATCTTGAATTTCTGAA
                      ____________________________________________________________
consensus             TGAAGACATTGATTGTGTCATGTCTGGTGAAGCTAAAGTCGATGATCTTGAATTTCTGAA
 
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rJMSF011H20+          AGCATGCCCGTCGTCTAACTGCCCTTCCACTTCATCGGCTAACTTGGGTAGCAGTTGGTC
rJMSF011G20+          AGCATGCCCGTCGTCTAACTGCCCTTCCACTTCATCGGCTAACTTGGGTAGCAGTTGGTC
                      ____________________________________________________________
consensus             AGCATGCCCGTCGTCTAACTGCCCTTCCACTTCATCGGCTAACTTGGGTAGCAGTTGGTC
 
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rJMSF011H20+          CAAGGATGCCTTGTATTCTTTGGAGAGCAGATCAATGACAAAATCAGATTCACATAGAAC
rJMSF011G20+          CAAGGATGCCTTGTATTCTTTGGAGAGCAGATCAATGACAAAATCAGATTCACATAGAAC
                      ____________________________________________________________
consensus             CAAGGATGCCTTGTATTCTTTGGAGAGCAGATCAATGACAAAATCAGATTCACATAGAAC
 
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rJMSF011H20+          AGAACGAACGCATGTCAGTAAAGAATGTGATTCTCTGGATCAGAATTTTGGATGGCATCG
rJMSF011G20+          AGAACGAACGCATGTCAGTAAAGAATGTGATTCTCTGGATCAGAATTTTGGATGGCATCG
                      ____________________________________________________________
consensus             AGAACGAACGCATGTCAGTAAAGAATGTGATTCTCTGGATCAGAATTTTGGATGGCATCG
 
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rJMSF011H20+          TTCTTTGAATTACGAGGACCATCTATTGGACTTTGAAAGCCATGTAGAGTGCAGTTGCTC
rJMSF011G20+          TTCTTTGAATTACGAGGACCATCTATTGGACTTTGAAAGCCATGTAGAGTGCAGTTGCTC
                      ____________________________________________________________
consensus             TTCTTTGAATTACGAGGACCATCTATTGGACTTTGAAAGCCATGTAGAGTGCAGTTGCTC
 
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rJMSF011H20+          GGAATGTGGAAATGAGAACATTGAAACGTGTACAGATAAGGAACTTGAAGATATGTTATA
rJMSF011G20+          GGAATGTGGAAATGAGAACATTGAAACGTGTACAGATAAGGAACTTGAAGATATGTTATA
                      ____________________________________________________________
consensus             GGAATGTGGAAATGAGAACATTGAAACGTGTACAGATAAGGAACTTGAAGATATGTTATA
 
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rJMSF011H20+          CTCAAATGGTATCGCCCCCGACAATTTTGTTCTCTCATCAGGGAGATGGGAAGTTGGGCA
rJMSF011G20+          CTCAAATGGTATCGCCCCCGACAATTTTGTTCTCTCATCAGGGAGATGGGAAGTTGGGCA
                      ____________________________________________________________
consensus             CTCAAATGGTATCGCCCCCGACAATTTTGTTCTCTCATCAGGGAGATGGGAAGTTGGGCA
 
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rJMSF011H20+          AGACACTCAAGAAGGTGCAAAAAAACTAACAATTGACAAAGAGTTTGAGCAGTACTTTGG
rJMSF011G20+          AGACACTCAAGAAGGTGCAAAAAAACTAACAATTGACAAAGAGTTTGAGCAGTACTTTGG
                      ____________________________________________________________
consensus             AGACACTCAAGAAGGTGCAAAAAAACTAACAATTGACAAAGAGTTTGAGCAGTACTTTGG
 
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rJMSF011H20+          CATGCTTATGTTGTGATGAAAATCAATTGTGTGAATATTAGTATGTCCTGCAACAAGGTA
rJMSF011G20+          CATGCTTATGTTGTGATGAAAATCAATTGTGTGAATATTAGTATGTCCTGCAACAAGGTA
                      ____________________________________________________________
consensus             CATGCTTATGTTGTGATGAAAATCAATTGTGTGAATATTAGTATGTCCTGCAACAAGGTA
 
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rJMSF011H20+          ACCAACCAATCTGAAACTGAATTTTGTACATCGCCCGATCCATGTATGTATGCTTTTCTT
rJMSF011G20+          ACCAACCAATCTGAAACTGAATTTTGTACATCGCCCGATCCATGTATGTATGCTTTTCTT
                      ____________________________________________________________
consensus             ACCAACCAATCTGAAACTGAATTTTGTACATCGCCCGATCCATGTATGTATGCTTTTCTT
 
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rJMSF011H20+          CTGTTTCAATTGCTTACTGCTTCTTTCTGGTATCTGCTCTGCACCTTTTATATATGTATT
rJMSF011G20+          CTGTTTCAATTGCTTACTGCTTCTTTCTGGTATCTGCTCTGCACCTTTTATATATGTATT
                      ____________________________________________________________
consensus             CTGTTTCAATTGCTTACTGCTTCTTTCTGGTATCTGCTCTGCACCTTTTATATATGTATT