| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038H15 | Sequence | 455 | 007790 (3) | ref|XP_009768441.1| | 5e-57 | PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris | 705 | 002785 (3) | ref|XP_009768441.1| | 1e-113 | PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris |
| JMSF011C01 | Sequence | 331 | 007790 (3) | ref|XP_009610375.1| | 3e-42 | PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana tomentosif | 760 | 002785 (3) | ref|XP_009768441.1| | 4e-97 | PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris |
| JMSF051L10 | Sequence | 678 | 007790 (3) | ref|XP_009768441.1| | 3e-95 | PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris | 787 | 002785 (3) | ref|XP_009768441.1| | 1e-104 | PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana sylvestris |
This contig is upended
. : . : . : . : . : . :
rJMFF038H15+ GACAATCCAAAAAAGACACACTCTGTTGCCAGGATAGTCAACAAAAAACACTTCACAAGG
rJMSF051L10+ AAAAACACTTCACAAGG
____________________________________________________________
consensus GACAATCCAAAAAAGACACACTCTGTTGCCAGGATAGTCAACAAAAAACACTTCACAAGG
. : . : . : . : . : . :
rJMFF038H15+ CTGAAGAGTTTATTGGATGAGCCTAAAGTGAAAGCTTCTGTAGTCTATGGTGGTTCGATG
rJMSF051L10+ CTGAAGAGTTTATTGGATGAGCCTAAAGTGAAAGCTTCTGTAGTCTATGGTGGTTCGATG
rJMSF011C01+ GCCTAAAGTGAAAGCTTCTGTAGTCTATGGTGGTTCGATG
____________________________________________________________
consensus CTGAAGAGTTTATTGGATGAGCCTAAAGTGAAAGCTTCTGTAGTCTATGGTGGTTCGATG
. : . : . : . : . : . :
rJMFF038H15+ GATGAAGATAATCTGTTCATCGAGCCAACTCTGTTGGTGGATCCCCCTCTTAATGCTGCA
rJMSF051L10+ GATGAAGATAATCTGTTCATCGAGCCAACTCTGTTGGTGGATCCCCCTCTTAATGCTGCA
rJMSF011C01+ GATGAAGATAATCTGTTCATCGAGCCAACTCTGTTGGTGGATCCCCCTCTTAATGCTGCA
____________________________________________________________
consensus GATGAAGATAATCTGTTCATCGAGCCAACTCTGTTGGTGGATCCCCCTCTTAATGCTGCA
. : . : . : . : . : . :
rJMFF038H15+ GTCATGACAGAAGAAATCTTTGGTCCAATTCTTCCAATAATAACACTGGAGAAAATAGAA
rJMSF051L10+ GTCATGACAGAAGAAATCTTTGGTCCAATTCTTCCAATAATAACACTGGAGAAAATAGAA
rJMSF011C01+ GTCATGACAGAAGAAATCTTTGGTCCAATTCTTCCAATAATAACACTGGAGAAAATAGAA
____________________________________________________________
consensus GTCATGACAGAAGAAATCTTTGGTCCAATTCTTCCAATAATAACACTGGAGAAAATAGAA
. : . : . : . : . : . :
rJMFF038H15+ GACAGCATTGATTTCATCAACTCCAGGCCTAAACCTCTTACCATTTATGCCTTCACTCAT
rJMSF051L10+ GACAGCATTGATTTCATCAACTCCAGGCCTAAACCTCTTACCATTTATGCCTTCACTCAT
rJMSF011C01+ GACAGCATTGATTTCATCAACTCCAGGCCTAAACCTCTTACCATTTATGCCTTCACTCAT
____________________________________________________________
consensus GACAGCATTGATTTCATCAACTCCAGGCCTAAACCTCTTACCATTTATGCCTTCACTCAT
. : . : . : . : . : . :
rJMFF038H15+ AATGAGACACTCAAGAAGAAGATAGCGTCTCAGACATCTTCAGGAAGCTTGGTGTTCAAT
rJMSF051L10+ AATGAGACACTCAAGAAGAAGATAGCGTCTCAGACATCTTCAGGAAGCTTGGTGTTCAAT
rJMSF011C01+ AATGAGACACTCAAGAAGAAGATAGCGTCTCAGACATCTTCAGGAAGCTTGGTGTTCAAT
____________________________________________________________
consensus AATGAGACACTCAAGAAGAAGATAGCGTCTCAGACATCTTCAGGAAGCTTGGTGTTCAAT
. : . : . : . : . : . :
rJMFF038H15+ GATACAATTGTCCAATATGCAGCTGATACTCTTCCATTTGGGGGAGTTGGAGAGTGTGGG
rJMSF051L10+ GATACAATTGTCCAATATGCAGCTGATACTCTTCCATTTGGGGGAGTTGGAGAGTGTGGG
rJMSF011C01+ GATACAATTGTCCAATATGCAGCTGATACTCTTCCATTTGGGGGAGTTGGAGAGTGTGGG
____________________________________________________________
consensus GATACAATTGTCCAATATGCAGCTGATACTCTTCCATTTGGGGGAGTTGGAGAGTGTGGG
. : . : . : . : . : . :
rJMFF038H15+ TTTGGGAGATACCATGGGAAGTTCTCATTTGATACATTCAGCCATGAGAAAGTAGTTGCT
rJMSF051L10+ TTTGGGAGATACCATGGGAAGTTCTCATTTGATACATTCAGCCATGAGAAAGTAGTTGCT
rJMSF011C01+ TTTGGGAGATACCATGGGAAGTTCTCATTTGATACATTCAGCCATGAGAAAGTAGTTGCT
____________________________________________________________
consensus TTTGGGAGATACCATGGGAAGTTCTCATTTGATACATTCAGCCATGAGAAAGTAGTTGCT
. : . : . : . : . : . :
rJMFF038H15+ AGAAGAAGCTATCTGATAGATTTTTGGTTCAGATATCCTCCATGGGATTTTAAGAAGCTT
rJMSF051L10+ AGAAGAAGCTATCTGATAGATTTTTGGTTCAGATATCCTCCATGGGATTTTAAGAAGCTT
rJMSF011C01+ AGAAGAAGCTATCTGATAGATTTTTGGTTCAGATATCCTCCATGGGATTTTAAGAAGCTT
____________________________________________________________
consensus AGAAGAAGCTATCTGATAGATTTTTGGTTCAGATATCCTCCATGGGATTTTAAGAAGCTT
. : . : . : . : . : . :
rJMFF038H15+ CAGCTCCTAAAGGCTGGCTACAGATATGATTATGTCAGCATTGTTCTCATGGTCTTGGGA
rJMSF051L10+ CAGCTCCTAAAGGCTGGCTACAGATATGATTATGTCAGCATTGTTCTCATGGTCTTGGGA
rJMSF011C01+ CAGCTCCTAAAGGCTGGCTACAGATATGATTATGTCAGCATTGTTCTCATGGTCTTGGGA
____________________________________________________________
consensus CAGCTCCTAAAGGCTGGCTACAGATATGATTATGTCAGCATTGTTCTCATGGTCTTGGGA
. : . : . : . : . : . :
rJMFF038H15+ CTAAAGAGAACCTATTAGCCTATGCTTGAATTTGTGTGATCTATCTTTGTTTTGGTTGCT
rJMSF051L10+ CTAAAGAGAACCTATTAGCCTATGCTTGAATTTGTGTGATCTATCTTTGTTTTGGTTGCT
rJMSF011C01+ CTAAAGAGAACCTATTAGCCTATGCTTGAATTTGTGTGATCTATCTTTGTTTTGGTTGCT
____________________________________________________________
consensus CTAAAGAGAACCTATTAGCCTATGCTTGAATTTGTGTGATCTATCTTTGTTTTGGTTGCT
. : . : . : . : . : . :
rJMFF038H15+ ATGCAACGCCAATGCATTCTGTGATTCAGTGAGTTAATTAACTAT
rJMSF051L10+ ATGCAACGCCAATGCATTCTGTGATTCAGTGAGTTAATTAACTATATAAGAAATTCTACA
rJMSF011C01+ ATGCAACGCCAATGCATTCTGTGATTCAGTGAGTTAATTAACTATATAAGAAATTCTACA
____________________________________________________________
consensus ATGCAACGCCAATGCATTCTGTGATTCAGTGAGTTAATTAACTATATAAGAAATTCTACA
. : . : . : . : . : . :
rJMSF051L10+ ATGTCGTAGCGAAAAAATATCATATTATCAGAATAAAAAATAGCGAAGATATTACTTATA
rJMSF011C01+ ATGTCGTAGCGAAAAAATATCATATTATCAGAATAAAAAATAGCGAAGATATTACTTATA
____________________________________________________________
consensus ATGTCGTAGCGAAAAAATATCATATTATCAGAATAAAAAATAGCGAAGATATTACTTATA
. : . : . : . : . : . :
rJMSF051L10+ TTTGTAATTTCTTTTATAAATGATGCAAATT
rJMSF011C01+ TTTGTAATTTCTTTTATAAATGATGCAAATTGTTGAAATATGATATTTTATCTATGAGAT
____________________________________________________________
consensus TTTGTAATTTCTTTTATAAATGATGCAAATTGTTGAAATATGATATTTTATCTATGAGAT