Contig 002778:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009L03+                                              AATCAGAAGACGATTCAGTTGTCA
                      ____________________________________________________________
consensus                                                 AATCAGAAGACGATTCAGTTGTCA
 
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rJMSF009L03+          ACCCAGAAGCCAAACTCGCCATCTCCCACATTGACAGTTGAAGACCAAGAGATGCTTCGC
                      ____________________________________________________________
consensus             ACCCAGAAGCCAAACTCGCCATCTCCCACATTGACAGTTGAAGACCAAGAGATGCTTCGC
 
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rJMSF009L03+          GACGTAAGCAAGAGGAAGCTAACGCCAGGAATCAGTAAAAGTCAGGAATTCGATACAGCA
                      ____________________________________________________________
consensus             GACGTAAGCAAGAGGAAGCTAACGCCAGGAATCAGTAAAAGTCAGGAATTCGATACAGCA
 
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rJMSF009L03+          AGAACCAGGTTGAGCAAGCAGCACCGCCTGAGCAAGAGCAGCAGCCATTCACCTAGTACA
                      ____________________________________________________________
consensus             AGAACCAGGTTGAGCAAGCAGCACCGCCTGAGCAAGAGCAGCAGCCATTCACCTAGTACA
 
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rJMSF009L03+          AGCGAGATCAAGAAAGACCCTTTCCCCATCAGGCGACCGTCTTCTGTACCCGTTATAAAC
                      ____________________________________________________________
consensus             AGCGAGATCAAGAAAGACCCTTTCCCCATCAGGCGACCGTCTTCTGTACCCGTTATAAAC
 
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rJMFF008G17+                                CGATGGACATCNTTGACAGAGTGGACACANTTCGCAGC
rJMSF009L03+          TTTGACCTCGACCGAATCAAAGCGATGGACATCATTGACAGAGTGGACACAATTCGCAGC
                      ____________________________________________________________
consensus             TTTGACCTCGACCGAATCAAAGCGATGGACATCATTGACAGAGTGGACACAATTCGCAGC
 
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rJMFF008G17+          ATTTAATTGANNGNCGGACAGGGCAGCTTCACTAGCTTCAACAGGCGGGCTTTCGTAAAT
rJMSF009L03+          ATTTAATTGAACGACGGACAGGGCAGCTTCACTAGCTTCAACAGGCGGGCTTTCGTAAAT
                      ____________________________________________________________
consensus             ATTTAATTGAACGACGGACAGGGCAGCTTCACTAGCTTCAACAGGCGGGCTTTCGTAAAT
 
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rJMFF008G17+          CATAAGAAACATCATTTGTTTGTTCTNTGCCATCAGATGCCAGATCANCATGAAGTGGAA
rJMSF009L03+          CATAAGAAACATCATTTGTTTGTTCTCTGCCATCAGATGCCAGATCAACATGAAGTGGAA
                      ____________________________________________________________
consensus             CATAAGAAACATCATTTGTTTGTTCTCTGCCATCAGATGCCAGATCAACATGAAGTGGAA
 
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rJMFF008G17+          GATTAGTGATCCTTGCCACCGTTNTGGTGACTGTGATGAGTTAAAACATTAATGNTTNTG
rJMSF009L03+          GATTAGTGATCCTTGCCACCGTTTTGGTGACTGTGATGAGTTAAAACATTAATGTTTCTG
                      ____________________________________________________________
consensus             GATTAGTGATCCTTGCCACCGTTTTGGTGACTGTGATGAGTTAAAACATTAATGTTTCTG
 
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rJMFF008G17+          CTGTTATATTCNTATTCCGTTAGTNNNNTTCTTCTTTCTTTGGNTGGGATAAAAGGGCGT
rJMSF009L03+          CTGTTATATTCCTATTCCGTTAGTTTTTTTCTTCTTTCTTTGGTTGGGATAAAAGGGCGT
                      ____________________________________________________________
consensus             CTGTTATATTCCTATTCCGTTAGTTTTTTTCTTCTTTCTTTGGTTGGGATAAAAGGGCGT
 
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rJMFF008G17+          TGTTAGGT                                                    
rJMSF009L03+          TGTTAGGTCTTGTTGGGTGAAGAAATCTTACTTTATTTACATGTATAGAATTTTCCCCTT
                      ____________________________________________________________
consensus             TGTTAGGTCTTGTTGGGTGAAGAAATCTTACTTTATTTACATGTATAGAATTTTCCCCTT
 
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rJMSF009L03+          TTTGTAAGCTAGAAGTTAATTTATCTATTACTGTTTTGTTTTGGTCCTCTGTTCATTAAT
                      ____________________________________________________________
consensus             TTTGTAAGCTAGAAGTTAATTTATCTATTACTGTTTTGTTTTGGTCCTCTGTTCATTAAT
 
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rJMSF009L03+          TAATAATTATATTATACAAGGTTTTAGTGTTTTACCAATTTGTACTTTGTATTTATGTGA
                      ____________________________________________________________
consensus             TAATAATTATATTATACAAGGTTTTAGTGTTTTACCAATTTGTACTTTGTATTTATGTGA