Contig 002770:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040G13Sequence436008846 (2)ref|XP_006489732.1|1e-73PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SLU7-like [Citrus sine675002770 (2)ref|XP_006351675.1|2e-69PREDICTED: pre-mRNA-splicing factor SLU7-like [Solanum tuberosum]
JMSF008M03Sequence273008846 (2)gb|AFK35263.1|1e-34unknown [Lotus japonicus]720002770 (2)ref|XP_006351675.1|7e-70PREDICTED: pre-mRNA-splicing factor SLU7-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF040G13+ TGGGTCAAAGTGAGAAAGAAGTTGAATATGATCGAACTGGCAGGATTGTGAAGGGACAG
rJMSF008M03+ CTGGGTCAAAGTGAGAAAGAAGTTGAATATGATCGAACTGGCAGGATTGTGAAGGGACAG
                      ____________________________________________________________
consensus CTGGGTCAAAGTGAGAAAGAAGTTGAATATGATCGAACTGGCAGGATTGTGAAGGGACAG
 
. : . : . : . : . : . :
rJMFF040G13+ GAGATGTCTATTCCTAGGAGCAAATACGAAGAGGACGTTTTCATCAACAATCACACCACT
rJMSF008M03+ GAGATGTCCATTCCTAGGAGCAAATACGAAGAGGACGTTTTCATCAACAATCACACCACT
                      ____________________________________________________________
consensus GAGATGTCTATTCCTAGGAGCAAATACGAAGAGGACGTTTTCATCAACAATCACACCACT
 
. : . : . : . : . : . :
rJMFF040G13+ GTTTGGGGTTCCTGGTGGAAGGACCACCAATGGGGTTACAAGTGTTGCAAACAGACCATC
rJMSF008M03+ GTTTGGGGTTCCTGGTGGAAGGACCACCAATGGGGTTACAAGTGTTGCAAACAGACCATC
                      ____________________________________________________________
consensus GTTTGGGGTTCCTGGTGGAAGGACCACCAATGGGGTTACAAGTGTTGCAAACAGACCATC
 
. : . : . : . : . : . :
rJMFF040G13+ CGAAACAGTTATTGCACAGGAACAGCTGGAATTGAAGCAGCTGAAGCTGCAGGTGATCTA
rJMSF008M03+ CGAAACAGTTATTGCACAGGAACAGCTGGAATTGAAGCAGCTGAAGCTGCAGGTGATCTA
                      ____________________________________________________________
consensus CGAAACAGTTATTGCACAGGAACAGCTGGAATTGAAGCAGCTGAAGCTGCAGGTGATCTA
 
. : . : . : . : . : . :
rJMFF040G13+ ATGAAGGCCAATATTGCTCGCAAAGAAGCTACAGAAGATGCCCATACACCAATTGAGCAG
rJMSF008M03+ ATGAAGGCCAATATTGCTCGCAAAGAAGCTACAGAAGATGCCCATACACCAATTGAGCAG
                      ____________________________________________________________
consensus ATGAAGGCCAATATTGCTCGCAAAGAAGCTACAGAAGATGCCCATACACCAATTGAGCAG
 
. : . : . : . : . : . :
rJMFF040G13+ AAGAAACTTGCTACATGGGGAACTGATGTACCGGATGATTTGGTTCTGGATGACAAAAAA
rJMSF008M03+ AAGAAACTTGCTACATGGGGAACTGATGTACCGGATGATTTGGTTCTGGATGACAAAAAA
                      ____________________________________________________________
consensus AAGAAACTTGCTACATGGGGAACTGATGTACCGGATGATTTGGTTCTGGATGACAAAAAA
 
. : . : . : . : . : . :
rJMFF040G13+ TTGGCTGAAGCACTCAAAAAGGAGGATGAACGGAGAAGGGAAGTGACAGATGAAAGGAAA
rJMSF008M03+ TTGGCTGAAGCACTCAAAAAGGAGGATGAACGGAGAAGGGAAGTGACAGATGAAAGGAAA
                      ____________________________________________________________
consensus TTGGCTGAAGCACTCAAAAAGGAGGATGAACGGAGAAGGGAAGTGACAGATGAAAGGAAA
 
. : . : . : . : . : . :
rJMFF040G13+ CGGAAATATAATGTGAAGTATGATAATGAGGTCACACCCGAAGAAATGGAGGCATATAGG
rJMSF008M03+ CGGAAATATAATGTGAAGTATGATAATGAGGTCACACCCGAAGAAATGGAGGCATATAGG
                      ____________________________________________________________
consensus CGGAAATATAATGTGAAGTATGATAATGAGGTCACACCCGAAGAAATGGAGGCATATAGG
 
. : . : . : . : . : . :
rJMFF040G13+ ATGAAGAAGATCCACCATGATGATCCAATGAGGGATTTTCTGCATTGAGATGTTGATAAT
rJMSF008M03+ ATGAAGAAGATCCACCATGATGATCCAATGAGGGATTTTCTGCATTGAGATGTTGATAAT
                      ____________________________________________________________
consensus ATGAAGAAGATCCACCATGATGATCCAATGAGGGATTTTCTGCATTGAGATGTTGATAAT
 
. : . : . : . : . : . :
rJMFF040G13+ ATGTTATCCTTTAGTTATTTCCTTGAGCCCGATGTAATATTGTCAAATTTGAAGTTGGTT
rJMSF008M03+ ATGTTATCCTTTAGTTATTTCCTTGAGCCCGATGTAATATTGTCAAATTTGAAGTTGGTT
                      ____________________________________________________________
consensus ATGTTATCCTTTAGTTATTTCCTTGAGCCCGATGTAATATTGTCAAATTTGAAGTTGGTT
 
. : . : . : . : . : . :
rJMFF040G13+ CAAACTCTGTATCGGTGTCATAGGTTTGAGACTAAACTGTTGAGAGTTTGCCTTCCCTTT
rJMSF008M03+ CAAACTCTGTATCGGTGTCATAGGTTTGAGACTAAACTGTTGAGAGTTTGCCTTCCCTTT
                      ____________________________________________________________
consensus CAAACTCTGTATCGGTGTCATAGGTTTGAGACTAAACTGTTGAGAGTTTGCCTTCCCTTT
 
. : . : . : . : . : . :
rJMFF040G13+ AAATGT
rJMSF008M03+ AAATGTACCAAAAAGATTACTTGTTTCAATCGAAATAGTGAATGTACATATGGATCCTGT
                      ____________________________________________________________
consensus AAATGTACCAAAAAGATTACTTGTTTCAATCGAAATAGTGAATGTACATATGGATCCTGT