Contig 002768:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032E06Sequence573001726 (4)ref|XP_010087267.1|1e-105Putative E3 ubiquitin-protein ligase [Morus notabilis] gb|EXB28669.1| Putative E782002768 (3)ref|XP_006343859.1|5e-69PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Solanum tuberosum]
JMSF008F04Sequence355001726 (4)ref|XP_008341585.1|2e-43PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X2 [Malus domestic752002768 (3)ref|XP_006343859.1|6e-68PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Solanum tuberosum]
JMSF043M21Sequence628001726 (4)ref|XP_010087267.1|3e-107Putative E3 ubiquitin-protein ligase [Morus notabilis] gb|EXB28669.1| Putative E629002768 (3)ref|XP_006343859.1|4e-59PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF032E06+ CATC
                      ____________________________________________________________
consensus CATC
 
. : . : . : . : . : . :
rJMFF032E06+ AGTCCCTCCGAAAAATGCAACAAGTTCTCTGAAGGAGAAAGAAGTGGCTGAGAACGTTCC
rJMSF008F04+ CTGAAGGAGAAAGAAGTGGCTGAGAACGTTCC
                      ____________________________________________________________
consensus AGTCCCTCCGAAAAATGCAACAAGTTCTCTGAAGGAGAAAGAAGTGGCTGAGAACGTTCC
 
. : . : . : . : . : . :
rJMFF032E06+ TCTATCTTCAGAGGAGACTAACAATGCGAGTTCTTCACAGGATACTCTCATGACTAACGC
rJMSF008F04+ TCTATCTTCAGAGGAGACTAACAATGCGAGTTCTTCACAGGATACTCTCATGACTAACGC
                      ____________________________________________________________
consensus TCTATCTTCAGAGGAGACTAACAATGCGAGTTCTTCACAGGATACTCTCATGACTAACGC
 
. : . : . : . : . : . :
rJMFF032E06+ TAGCAAAGAAGAGCTCTCGCTTGGAAAGGGTATCCACGAGGAAAACGATGGTAAAACTAC
rJMSF043M21+ ATCCACGAGGAAAACGATGGTAAAACTAC
rJMSF008F04+ TAGCAAAGAAGAGCTCTCGCTTGGAAAGGGTATCCACGAGGAAAACGATGGTAAAACTAC
                      ____________________________________________________________
consensus TAGCAAAGAAGAGCTCTCGCTTGGAAAGGGTATCCACGAGGAAAACGATGGTAAAACTAC
 
. : . : . : . : . : . :
rJMFF032E06+ GACTACGAATCACTGCAACGGAGTTGCTGGCTCGAGTGAGAAATGTGTTCTTGGACTGAA
rJMSF043M21+ GACTACGAATCACTGCAACGGAGTTGCTGGCTCGAGTGAGAAATGTGTTCTTGGACTGAA
rJMSF008F04+ GACTACGAATCACTGCAACGGAGTTGCTGGCTCGGGTGAGAAATGTGTTCTTGGACTGAA
                      ____________________________________________________________
consensus GACTACGAATCACTGCAACGGAGTTGCTGGCTCGAGTGAGAAATGTGTTCTTGGACTGAA
 
. : . : . : . : . : . :
rJMFF032E06+ TCTGAGTGAAGCCGTTGCTAAATTAGAGAAAAGCAAACCGATGTTTCTCTGCAAAAACTG
rJMSF043M21+ TCTGAGTGAAGCCGTTGCTAAATTAGAGAAAAGCAAACCGATGTTTCTCTGCAAAAACTG
rJMSF008F04+ TCTGAGTGAAGCCGTTGCTAAATTAGAGAAAAGCAAACCGATGTTTCTCTGCAAAAACTG
                      ____________________________________________________________
consensus TCTGAGTGAAGCCGTTGCTAAATTAGAGAAAAGCAAACCGATGTTTCTCTGCAAAAACTG
 
. : . : . : . : . : . :
rJMFF032E06+ GAGGGAAGTCCTCTGCAAGTGCCAAAATTGTGTGGACTTCTACAACCAGAAAGGCGTCGG
rJMSF043M21+ GAGGGAAGTCCTCTGCAAGTGCCAAAATTGTGTGGACTTCTACAACCAGAAAGGCGTCGG
rJMSF008F04+ GAGGGAAGTCCTCTGCAAGTGCCAAAATTGTGTGGACTTCTACAACCAGAAAGGCGTCGG
                      ____________________________________________________________
consensus GAGGGAAGTCCTCTGCAAGTGCCAAAATTGTGTGGACTTCTACAACCAGAAAGGCGTCGG
 
. : . : . : . : . : . :
rJMFF032E06+ CTACTTGCTCGACCCAGAGGACACAATTGCCGAGTACGAGGCAATGGCAAAGCAGAAAAG
rJMSF043M21+ CTACTTGCTCGACCCAGAGGACACAATTGCCGAGTACGAGGCAATGGCAAAGCAGAAAAG
rJMSF008F04+ CTACTTGCTCGACCCAGAGGACACAATTGCCGAGTACGAGGCAATGGCAAAGCAGAAAAG
                      ____________________________________________________________
consensus CTACTTGCTCGACCCAGAGGACACAATTGCCGAGTACGAGGCAATGGCAAAGCAGAAAAG
 
. : . : . : . : . : . :
rJMFF032E06+ AGAGGAGTTGGAGCAGCAGCAGAGCTCCGAGTTCCTAAACAAACTTGGCCACATCGAGAA
rJMSF043M21+ AGAGGAGTTGGAGCAGCAGCAGAGCTCCGAGTTCCTAAACAAACTTGGCCACATCGAGAA
rJMSF008F04+ AGAGGAGTTGGAGCAGCAGCAGAGCTCCGAGTTCCTAAACAAACTTGGCCACATCGAGAA
                      ____________________________________________________________
consensus AGAGGAGTTGGAGCAGCAGCAGAGCTCCGAGTTCCTAAACAAACTTGGCCACATCGAGAA
 
. : . : . : . : . : . :
rJMFF032E06+ AATCGAGATCTTGACTGGCATAGCTGACATTAAGAATGAGCTGAGCTCATACCTGGCGTC
rJMSF043M21+ AATCGAGATCTTGACTGGCATAGCTGACATTAAGAATGAGCTGAGCTCATACCTGGCGTC
rJMSF008F04+ AATCGAGATCTTGACTGGCATAGCTGACATTAAGAATGAGCTGAGCTCATACCTGGCGTC
                      ____________________________________________________________
consensus AATCGAGATCTTGACTGGCATAGCTGACATTAAGAATGAGCTGAGCTCATACCTGGCGTC
 
. : . : . : . : . : . :
rJMFF032E06+ CTTCGATCCATCAAAGGCGGTTACCTCTGCTGACATTCACCAGGTTTTCGAGAATCTCGC
rJMSF043M21+ CTTCGATCCATCAAAGGCGGTTACCTCTGCTGACATTCACCAGGTTTTCGAGAATCTCGC
rJMSF008F04+ CTTCGATCCATCAAAGGCGGTTACCTCTGCTGACATTCACCAGGTTTTCGAGAATCTCGC
                      ____________________________________________________________
consensus CTTCGATCCATCAAAGGCGGTTACCTCTGCTGACATTCACCAGGTTTTCGAGAATCTCGC
 
. : . : . : . : . : . :
rJMFF032E06+ TAAGAAACGCAAACGAATGGAGTAAGTTATTAAAAGGTGTGTTGTTAATGCAGAATTGGA
rJMSF043M21+ TAAGAAACGCAAACGAATGGAGTAAGTTATTAAAAGGTGTGTTGTTAATGCAGAATTGGA
rJMSF008F04+ TAAGAAACGCAAACGAATGGAGTAAGTTATTAAAAGGTGTGTTGTTAATGCAGAATTGGA
                      ____________________________________________________________
consensus TAAGAAACGCAAACGAATGGAGTAAGTTATTAAAAGGTGTGTTGTTAATGCAGAATTGGA
 
. : . : . : . : . : . :
rJMFF032E06+ TCATGACTAGTGTAGTTGTGTTGGTGTTCAATTTGTTAGACCTCCTTGAATGGATGTACA
rJMSF043M21+ TCATGACTAGTGTAGTTGTGTTGGTGTTCAATTTGTTAGACCTCCTTGAATGGATGTACA
rJMSF008F04+ TCATGACTAGTGTAGTTGTGTTGGTGTTCAATTTGTTAGACCTCCTTGAATGGATGTACA
                      ____________________________________________________________
consensus TCATGACTAGTGTAGTTGTGTTGGTGTTCAATTTGTTAGACCTCCTTGAATGGATGTACA
 
. : . : . : . : . : . :
rJMFF032E06+ TCTAAACTATCTAAATGCTTATATAAATATTATTATGTAGTTATGA
rJMSF043M21+ TCTAAACTATCTAAATGCTTATATAAATATTATTATGTAGTTATGA
rJMSF008F04+ TCTAAACTATCTAAATGCTTATATAAATATTATTATGTAGTTATGATAAAAGAACAAACA
                      ____________________________________________________________
consensus TCTAAACTATCTAAATGCTTATATAAATATTATTATGTAGTTATGATAAAAGAACAAACA