Contig 002765:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004N24Sequence383002765 (2)ref|XP_006361787.1|2e-04PREDICTED: protein IQ-DOMAIN 1-like isoform X2 [Solanum tuberosum] ref|XP_006361
JMSF007P18Sequence262023128776002765 (2)ref|XP_009626665.1|5e-59PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-              CAATCAATCTGAATCAATAAAAGATGGTTTCTTGAACTGTTACAATCCCAACAATG
                      ____________________________________________________________
consensus                 CAATCAATCTGAATCAATAAAAGATGGTTTCTTGAACTGTTACAATCCCAACAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          GAAGAAAGAAAAATATGAAGACTGTAGTCCAATGAACTCTGTTGACTCTTTGTCTGGAAC
                      ____________________________________________________________
consensus             GAAGAAAGAAAAATATGAAGACTGTAGTCCAATGAACTCTGTTGACTCTTTGTCTGGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          CAGACACCAAACAACAATGAATCTATAAGGTACAATTCTATAGAGAAGTGGAAGTTATAC
                      ____________________________________________________________
consensus             CAGACACCAAACAACAATGAATCTATAAGGTACAATTCTATAGAGAAGTGGAAGTTATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          AAATATATGAATTCAAATCAACCAACATAACATACTTATAGAGCACCATTTTAGTGAGAA
                      ____________________________________________________________
consensus             AAATATATGAATTCAAATCAACCAACATAACATACTTATAGAGCACCATTTTAGTGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          CACTTTAGTTGGTCTCCCCATTTGTGTTAACAGTGGAGATGTTCACCTTTGGCGGGCCGG
                      ____________________________________________________________
consensus             CACTTTAGTTGGTCTCCCCATTTGTGTTAACAGTGGAGATGTTCACCTTTGGCGGGCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004N24+                CGCCTTGGCCTGGCTGGTGAAGGTGGGTACGAGAGCCGCTTCTTCACAGAGCCAG
rJMSF007P18-          AGTGTCGCCTTGGCCTGGCTGGTGAAGGCGGGTACGAGAGCCGCTTCTTCACGGAGCCCG
                      ____________________________________________________________
consensus             AGTGTCGCCTTGGCCTGGCTGGTGAAGGTGGGTACGAGAGCCGCTTCTTCACGGAGCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004N24+           CTAATCCCTTTTCGAGAGTCCCATTCTCCACGCCAAATGGACTTTGCAAGCGCACTTTTG
rJMSF007P18-          CTGATCCCTTTTCGGGAGTCACATTCCCCACGCCTAATGGGCTTTGCAAGCGCGTTTTTG
                      ____________________________________________________________
consensus             CTGATCCCTTTTCGGGAGTCCCATTCTCCACGCCTAATGGGCTTTGCAAGCGCGTTTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004N24+           TCTTTCCTGATTTGGTGGGCGTCGTTTAGCTTGGTAT                       
rJMSF007P18-          CCTTTGCTGACTTGGTGGGCGTCATGTAGCTTGGTATGGACTGGAAGCTCGCCAAACTCT
                      ____________________________________________________________
consensus             TCTTTGCTGATTTGGTGGGCGTCGTTTAGCTTGGTATGGACTGGAAGCTCGCCAAACTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          CGTCATCTCTTACCGATGACCCTGCAATGCTATGCCTCCTATTGCGCTCCGATTGGATGC
                      ____________________________________________________________
consensus             CGTCATCTCTTACCGATGACCCTGCAATGCTATGCCTCCTATTGCGCTCCGATTGGATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          TGAGCATGCTTTTAGTGTCGTCATCTTGGCTCGTTGCGCTCACTCTTGGGCTTGGTAGTT
                      ____________________________________________________________
consensus             TGAGCATGCTTTTAGTGTCGTCATCTTGGCTCGTTGCGCTCACTCTTGGGCTTGGTAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          TCGTTTTTCTGGCAGCCATTGAAGAGGCAGGCGGCTTGGATGCAGGAGTGGCGGGTGAAT
                      ____________________________________________________________
consensus             TCGTTTTTCTGGCAGCCATTGAAGAGGCAGGCGGCTTGGATGCAGGAGTGGCGGGTGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          GGTGGGTTGATGCGGGCTTTTGGCTCGATGGTGAAAAAGGTTGTTCATTGTTTAGCTGAT
                      ____________________________________________________________
consensus             GGTGGGTTGATGCGGGCTTTTGGCTCGATGGTGAAAAAGGTTGTTCATTGTTTAGCTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007P18-          GACGCGCAAATGACCTTGTAATTTCTCCCCGATAATGCTAACACCACCACTTTTCACAGA
                      ____________________________________________________________
consensus             GACGCGCAAATGACCTTGTAATTTCTCCCCGATAATGCTAACACCACCACTTTTCACAGA