Contig 002760:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005I13Sequence423007751 (6)ref|XP_009761327.1|2e-33PREDICTED: serine/threonine-protein kinase STN8, chloroplastic [Nicotiana sylve322002760 (2)
JMSF052K08Sequence646009587 (2)323002760 (2)

Alignment

This contig is upended


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rJMSF052K08+                                        CNAANNTGGGAAAAAAAAAAAAACGATAGT
rJMSF005I13+                                                   AAAAAAAAAAAACGATAGT
                      ____________________________________________________________
consensus                                           CNAANNTGGGAAAAAAAAAAAAACGATAGT
 
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rJMSF052K08+          GAGACTGCACGTTTATATTTNATATATTATATGCTCGACAGAATGAATTGTCACAGAAGT
rJMSF005I13+          GAGACTGCACGTTTATATTTTATATATTATATGCTCGACAGAATGAATTGTCACAGAAGT
                      ____________________________________________________________
consensus             GAGACTGCACGTTTATATTTTATATATTATATGCTCGACAGAATGAATTGTCACAGAAGT
 
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rJMSF052K08+          TTTGGATGCACAAAAGATGAGGAAAGGATTGGCAGATGATCTGTNGTNGGTACAATGTTG
rJMSF005I13+          TTTGGATGCACAAAAGATGAGGAAAGGATTGGCAGATGATCTGTTGTTGGTACAATGTTG
                      ____________________________________________________________
consensus             TTTGGATGCACAAAAGATGAGGAAAGGATTGGCAGATGATCTGTTGTTGGTACAATGTTG
 
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rJMSF052K08+          TCTGCTGGGATGCAACTCCTGGGGGGAGGCTAAATACATTAATCTCACCAAAAACTTTTT
rJMSF005I13+          TCTGCTGGGATGCAACTCCTGGGGGGAGGCTAAATACATTAATCTCACCAAAAACTTTTT
                      ____________________________________________________________
consensus             TCTGCTGGGATGCAACTCCTGGGGGGAGGCTAAATACATTAATCTCACCAAAAACTTTTT
 
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rJMSF052K08+          ATTTTTATGATCCTAGATCAAGGGAGTTTCTCCTGAGGAAATAGGCATATTTGATAGTTC
rJMSF005I13+          ATTTTTATGATCTTAGATCAAGGGAGTTTCTCCTGAGGAAATAGGCATATTTGATAGTTC
                      ____________________________________________________________
consensus             ATTTTTATGATCTTAGATCAAGGGAGTTTCTCCTGAGGAAATAGGCATATTTGATAGTTC
 
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rJMSF052K08+          TCTGCTATAGTTTTCACTTGCATAGAAACTAGATGGTTTNGCCT                
rJMSF005I13+          TCTGCTATAGTTTTCACTTGCATAGAAACTAGATGGTTTTGCCTTGGCAAGATTATGTAT
                      ____________________________________________________________
consensus             TCTGCTATAGTTTTCACTTGCATAGAAACTAGATGGTTTTGCCTTGGCAAGATTATGTAT