Contig 002758:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001L03Sequence311006364 (2)ref|XP_004242239.1|3e-08PREDICTED: cannabidiolic acid synthase-like [Solanum lycopersicum]708002758 (2)ref|XP_009787052.1|6e-82PREDICTED: cannabidiolic acid synthase-like 1 [Nicotiana sylvestris]
JMSF003O20Sequence268006364 (2)744002758 (2)ref|XP_009787052.1|4e-83PREDICTED: cannabidiolic acid synthase-like 1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF003O20+                                              CCTCGGACCAGCCGACACCCTTCT
                      ____________________________________________________________
consensus                                                 CCTCGGACCAGCCGACACCCTTCT
 
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rJMSF001L03+             ATCCTGCAACAAAGTTTCCCAGAATTAGGAGCGACGAGACAAGACCTTAGAGAGATG
rJMSF003O20+          TAAATCCTGCAACAAAGTTTCCCAGAATTAGGAGCGACGAGACAAGACCTTAGAGAGATG
                      ____________________________________________________________
consensus             TAAATCCTGCAACAAAGTTTCCCAGAATTAGGAGCGACGAGACAAGACCTTAGAGAGATG
 
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rJMSF001L03+          AGCTGGATAGAATCCGTCCTAACCATCGACGGCTTCCCGAACGGCACAGACCCGAAAGCT
rJMSF003O20+          AGCTGGATAGAATCCGTCCTAACCATCGACGGCTTCCCGAACGGCACAGACCCGAAAGCT
                      ____________________________________________________________
consensus             AGCTGGATAGAATCCGTCCTAACCATCGACGGCTTCCCGAACGGCACAGACCCGAAAGCT
 
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rJMSF001L03+          CTCATGGGCACTATTGTCAACAACGGGCAACCAAATTACTTCAAAGGAAAATCCGACTAC
rJMSF003O20+          CTCATGGGCACTATTGTCAACAACGGGCAACCAAATTACTTCAAAGGAAAATCCGACTAC
                      ____________________________________________________________
consensus             CTCATGGGCACTATTGTCAACAACGGGCAACCAAATTACTTCAAAGGAAAATCCGACTAC
 
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rJMSF001L03+          GTGAAGAACCCAATCCCCGTGGAAGGCCTGGAAGGGGTTTGGGACTTTCTGCGAGAGAAC
rJMSF003O20+          GTGAAGAACCCAATCCCCGTGGAAGGCCTGGAAGGGGTTTGGGACTTTCTGCGAGAGAAC
                      ____________________________________________________________
consensus             GTGAAGAACCCAATCCCCGTGGAAGGCCTGGAAGGGGTTTGGGACTTTCTGCGAGAGAAC
 
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rJMSF001L03+          AATTCGGGCTTGCTCATCTTTAGCCCGTACGGTGGAAGAATGGACGAGATATCAGAGTCG
rJMSF003O20+          AATTCGGGCTTGCTCATCTTTAGCCCGTACGGTGGAAGAATGGACGAGATATCAGAGTCG
                      ____________________________________________________________
consensus             AATTCGGGCTTGCTCATCTTTAGCCCGTACGGTGGAAGAATGGACGAGATATCAGAGTCG
 
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rJMSF001L03+          GCGATTCCATTCCCGCACAGGGCTGGGAATCTGTACAAAATCCAGTACGNTATGAGTTGG
rJMSF003O20+          GCGATTCCATTCCCGCACAGGGCTGGGAATCTGTACAAAATCCAGTACGTTATGAGTTGG
                      ____________________________________________________________
consensus             GCGATTCCATTCCCGCACAGGGCTGGGAATCTGTACAAAATCCAGTACGTTATGAGTTGG
 
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rJMSF001L03+          AGTGAAGCAGGGAGGGAGGCCTATGAAATCCACATGAGGTGGATAAGAAGGATGTTTCAA
rJMSF003O20+          AGTGAAGCAGGGAGGGAGGCCTATGAAATCCACATGAGGTGGATAAGAAGGATGTTTCAA
                      ____________________________________________________________
consensus             AGTGAAGCAGGGAGGGAGGCCTATGAAATCCACATGAGGTGGATAAGAAGGATGTTTCAA
 
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rJMSF001L03+          TACTACACTCCCTTCGTCTCCAAGTCTCCAAGNGAAGCGTATGTAAATTACAGGGATCTT
rJMSF003O20+          TACTACACTCCCTTCGTCTCCAAGTCTCCAAGAGAAGCGTATGTAAATTACAGGGATCTT
                      ____________________________________________________________
consensus             TACTACACTCCCTTCGTCTCCAAGTCTCCAAGAGAAGCGTATGTAAATTACAGGGATCTT
 
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rJMSF001L03+          GATATTGGGACAAATAGTATGCCTAATTCAACCTACGGTGCGCAGTCTAAGAATTGGGGT
rJMSF003O20+          GATATTGGGACAAATAGTATGCCTAATTCAACCTACGGTGCGCAGTCTAAGAATTGGGGT
                      ____________________________________________________________
consensus             GATATTGGGACAAATAGTATGCCTAATTCAACCTACGGTGCGCAGTCTAAGAATTGGGGT
 
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rJMSF001L03+          GTCAAGTATTTCAAGAACAATTTTGAAAGGCTTGTTAGAGTTAAGACAAAAGTTGACCCT
rJMSF003O20+          GTCAAGTATTTCAAGAACAATTTTGAAAGGCTTGTTAGAGTTAAGACAAAAGTTGACCCT
                      ____________________________________________________________
consensus             GTCAAGTATTTCAAGAACAATTTTGAAAGGCTTGTTAGAGTTAAGACAAAAGTTGACCCT
 
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rJMSF001L03+          CAAAACTTCTTTAGGAATGAGCAAAGCATTCCACCCCTTTCATATATAGTGAATTAGTTA
rJMSF003O20+          CAAAACTTCTTTAGGAATGAGCAAAGCATTCCACCCCTTTCATATATAGTGAATTAGTTA
                      ____________________________________________________________
consensus             CAAAACTTCTTTAGGAATGAGCAAAGCATTCCACCCCTTTCATATATAGTGAATTAGTTA
 
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rJMSF001L03+          CTGTATCTGATGTAGTAATAAAGTGTTATTCTTAAATTATTAAAATGACTA         
rJMSF003O20+          CTGTATCTGATGTAGTAATAAAGTGTTATTCTTAAATTATTAAAATGACTAATATGTCAT
                      ____________________________________________________________
consensus             CTGTATCTGATGTAGTAATAAAGTGTTATTCTTAAATTATTAAAATGACTAATATGTCAT