| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012A05 | Sequence | 512 | 007321 (2) | ref|XP_011069845.1| | 1e-19 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Sesamum indicum] | 756 | 002757 (9) | ref|XP_006343560.1| | 1e-76 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32-like isoform X2 [Solanum |
| JMFF016B01 | Sequence | 563 | 005009 (8) | 618 | 002757 (9) | ref|XP_009780682.1| | 7e-25 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] | |||
| JMFF028H20 | Sequence | 510 | 005009 (8) | 687 | 002757 (9) | ref|XP_009780682.1| | 9e-38 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] | |||
| JMFF029L09 | Sequence | 528 | 005009 (8) | gb|KDO62371.1| | 6e-52 | hypothetical protein CISIN_1g0146962mg, partial [Citrus sinensis] | 516 | 002757 (9) | ref|XP_009780682.1| | 2e-18 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] |
| JMSF003O05 | Sequence | 296 | 005009 (8) | 727 | 002757 (9) | ref|XP_009780682.1| | 1e-46 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] | |||
| JMSF003P17 | Sequence | 271 | 005009 (8) | 745 | 002757 (9) | ref|XP_009780682.1| | 9e-75 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] | |||
| JMSF012L17 | Sequence | 512 | 005009 (8) | 728 | 002757 (9) | ref|XP_009780682.1| | 4e-47 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] | |||
| JMSF025F02 | Sequence | 347 | 002757 (9) | ref|XP_009780682.1| | 2e-47 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] | |||||
| JMSF046P07 | Sequence | 748 | 005009 (8) | ref|XP_011069845.1| | 3e-63 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Sesamum indicum] | 754 | 002757 (9) | ref|XP_009780682.1| | 6e-76 | PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF025F02+ GGATGGA
____________________________________________________________
consensus GGATGGA
. : . : . : . : . : . :
rJMSF025F02+ CAACAAACGATCCACNTNTGACAATAGACCCTTGTGTTGNTTGNTTGGAAAGAAAGTGCA
rJMSF046P07+ ACAATAGACCCTTGTGTTGTTTGTTCGGAAAGAAAGTGCA
rJMSF003P17+ ACAATAGACCCTTGTGTTGTTTGTTCGGAAAGAAAGTGCA
rJMFF012A05+ ACAATAGACCCTTGTGTTGTTTGTTTGGAAAGAAAGTGCA
____________________________________________________________
consensus CAACAAACGATCCACNTNTGACAATAGACCCTTGTGTTGTTTGTTTGGAAAGAAAGTGCA
. : . : . : . : . : . :
rJMSF025F02+ CTGNTGCTGCAGAAGGTTGTTTTCATGAGTTCTGCATACAATGTGCTTTGTATTTATGCT
rJMSF046P07+ CTGTTGCTGCAGAAGGTTGTTTTCATGAGTTCTGCATACAATGTGCTTTGTATTTATGCT
rJMSF003P17+ CTGGTGCTGCAGAAGGTTGTTTTCATGAGTTCTGCATACAATGTGCTTTGTATTTATGCT
rJMFF012A05+ CTGTTGCTGCAGAAGGTTGTTTTCATGAGTTCTGCATACAATGTGCTTTGTATTTATGCT
____________________________________________________________
consensus CTGTTGCTGCAGAAGGTTGTTTTCATGAGTTCTGCATACAATGTGCTTTGTATTTATGCT
. : . : . : . : . : . :
rJMSF025F02+ CCACGAGTACTACCTCAACTACAGGTCATGGCCCTCCAGGCGCAATTCCCTGCCCATTAT
rJMSF046P07+ CCACGAGTACTACCTCAACTACAGGTCATGGCCCTCCAGGCGCAATTCCCTGCCCATTAT
rJMSF003P17+ CCACGAGTACTACCTCAACTACAGGTCATGGCCCTCCAGGCGCAATTCCCTGCCCATTAT
rJMFF012A05+ CCACGAGTACTACCTCAACTACAGGTCATGGCCCTCCAGGCGCAATTCCCTGCCCATTAT
rJMSF012L17+ CCCATTAT
rJMSF003O05+ CCCATTAT
____________________________________________________________
consensus CCACGAGTACTACCTCAACTACAGGTCATGGCCCTCCAGGCGCAATTCCCTGCCCATTAT
. : . : . : . : . : . :
rJMSF025F02+ GCCGGCATGGTATCATTTCATTTGTTAAGCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
rJMSF046P07+ GCCGGCATGGTATCATTTCATTTGTTAAGCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
rJMSF003P17+ GCCGGCATGGTATCATTTCATTTGTTAAGCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
rJMFF012A05+ GCCGGCATGGTATCATTTCATTTGTTAAGCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
rJMSF012L17+ GCCGGCATGGTATCATTTCATTTGTTAAGCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
rJMFF028H20+ GCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
rJMSF003O05+ GCCGGCATGGTATCANTTCATTTGTTAAGCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
____________________________________________________________
consensus GCCGGCATGGTATCATTTCATTTGTTAAGCTGGCAGATACAAAGCCAGCTGTCAAGGAAA
. : . : . : . : . : . :
rJMSF025F02+ CTGCTAGAACAAATCTGTCATTGCCGTTTTGCAGCTGCTCAGCTGATGGTCAAGAACTTG
rJMSF046P07+ CTGCTAGAACAAATCTGTCATTGCCGTTTTGCAGCTGCTCAGCTGATGGTCAAGAACTTG
rJMSF003P17+ CTGCTAGAACAAATCTGTCATTGCCGTTTTGCAGCTGCTCAGCTGATGGTCAAGAACTTG
rJMFF012A05+ CTGCTAGAACAAATCTGTCATTGCCGTTTTGCAGCTGCTCAGCTGATGGTCAAGAACTTG
rJMSF012L17+ CTGCTAGAACAAATCTGTCATTGCCGTTTTGCAGCTGCTCAGCTGATGGTCAAGAACTTG
rJMFF028H20+ CTGCTAGAACAAATCTGTCATTGCCGTTTTGCGGCTGCTCAGCTGATGGTCAAGAACTTG
rJMFF016B01+ GATGGTCAAGAACTTG
rJMSF003O05+ CTGCTAGAACAAATCTGTCATTGCCGTTTTGCAGCTGCTCAGCTGATGGTCAAGAACTTG
____________________________________________________________
consensus CTGCTAGAACAAATCTGTCATTGCCGTTTTGCAGCTGCTCAGCTGATGGTCAAGAACTTG
. : . : . : . : . : . :
rJMSF025F02+ ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTG
rJMSF046P07+ ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
rJMSF003P17+ ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
rJMFF012A05+ ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
rJMSF012L17+ ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
rJMFF028H20+ ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
rJMFF016B01+ ATCCAATAGAAGTTGCATTTTGCAAGCCNGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
rJMSF003O05+ ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
____________________________________________________________
consensus ATCCAATAGAAGTTGCATTTTGCAAGCCCGATTTTTATTGTGCCCGGGTTTCTCCCAGTT
. : . : . : . : . : . :
rJMSF046P07+ CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
rJMSF003P17+ CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
rJMFF012A05+ CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
rJMSF012L17+ CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
rJMFF028H20+ CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
rJMFF016B01+ CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
rJMFF029L09+ CTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
rJMSF003O05+ CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
____________________________________________________________
consensus CGTCCTTTCGCTCATCAAGCTTCCAAAAGTTCCCATTGGCTAAATTCAGCCCCGGACTGT
. : . : . : . : . : . :
rJMSF046P07+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
rJMSF003P17+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
rJMFF012A05+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
rJMSF012L17+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
rJMFF028H20+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
rJMFF016B01+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
rJMFF029L09+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
rJMSF003O05+ GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
____________________________________________________________
consensus GTATGGGAACTCAAGAAACTAGTCCATCTTTAGTCTCAAGCAATGATCGAAGAAGCACAC
. : . : . : . : . : . :
rJMSF046P07+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
rJMSF003P17+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
rJMFF012A05+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
rJMSF012L17+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
rJMFF028H20+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
rJMFF016B01+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
rJMFF029L09+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
rJMSF003O05+ ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
____________________________________________________________
consensus ATAACAGTTTGACTAGGTGTTCGAGATCCAGCTTTCGCCGTTCAAATACTGAGCGAAGGC
. : . : . : . : . : . :
rJMSF046P07+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
rJMSF003P17+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
rJMFF012A05+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
rJMSF012L17+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
rJMFF028H20+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
rJMFF016B01+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
rJMFF029L09+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
rJMSF003O05+ GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
____________________________________________________________
consensus GCTGGTTATGCTCATTTAGCCAATCCGTTGAAACTGGAAGCAGCAGTTAGGTTTGTGTGT
. : . : . : . : . : . :
rJMSF046P07+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
rJMSF003P17+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
rJMFF012A05+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
rJMSF012L17+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
rJMFF028H20+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
rJMFF016B01+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
rJMFF029L09+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
rJMSF003O05+ TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
____________________________________________________________
consensus TTTCCAGTACTCGCCACACTGGTATTACAGTTCTATGGCGTTAACTTTTTTCAATTATAT
. : . : . : . : . : . :
rJMSF046P07+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
rJMSF003P17+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
rJMFF012A05+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
rJMSF012L17+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
rJMFF028H20+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
rJMFF016B01+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
rJMFF029L09+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
rJMSF003O05+ TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
____________________________________________________________
consensus TTAGCGTCCATAAATTCATACACCTCTGTCTGCATAATATAAATTCAACTGCTTTGTGGA
. : . : . : . : . : . :
rJMSF046P07+ TACCAGAATGTAAATGAAGGCCTCTGTAAA
rJMSF003P17+ TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAAC
rJMFF012A05+ TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAACATGTGGACTGGAT
rJMSF012L17+ TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAACATGTGGACTGGATTGT
rJMFF028H20+ TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAACATGTGGACTGGATTGT
rJMFF016B01+ TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAACATGTGGACTGGATTGT
rJMFF029L09+ TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAACATGTGGACTGGATTGT
rJMSF003O05+ TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAACATGTGGACTGGATTGT
____________________________________________________________
consensus TACCAG-ATGTAAATGAAGGCCTCTGTAAAGTAACAAGAAAAACATGTGGACTGGATTGT
. : . : . : . : . : . :
rJMSF012L17+ GTTTTAAAAATTTTCAGTCATTTATCTCTTTGTAAGAGATTTTGTTTTATCTTTAGTTTT
rJMFF028H20+ GTTTTAAAAATTTTCAGTCATTTATCTCTTTGTAAGAGATTTTGTTTTATCTTTAGTTTT
rJMFF016B01+ GTTTTAAAAATTTTCAGTCATTTATCTCTTTGTAAGAGATTTTGTTTTATCTTTAGTTTT
rJMFF029L09+ GTTTTAAAAATTTTCAGTCATTTATCTCTTTGTAAGAGATTTTGTTTTATCTTTAGTTTT
rJMSF003O05+ GTTTTAAAAATTTTCAGTCATTTATCTCTTTGTAAGAGATTTTGTTTTATCTTTAGTTTT
____________________________________________________________
consensus GTTTTAAAAATTTTCAGTCATTTATCTCTTTGTAAGAGATTTTGTTTTATCTTTAGTTTT
. : . : . : . : . : . :
rJMSF012L17+ TGGGGGGGTTCTTCACCTCCATGATATGTAC
rJMFF028H20+ TGGGGGGGTTCTTCACCTCCATGATATGTAC
rJMFF016B01+ TGGGGGGGTTCTTCACCTCCATGATATGTAC
rJMFF029L09+ TGGGGGGGTTCTTCACCTCCATGATATGTACAAGTAAATAACATAC
rJMSF003O05+ TGGGGGGGTTCTTCACCTCCATGATATGTACAAGTAAATAACATACCAGTGGGAAACTTT
____________________________________________________________
consensus TGGGGGGGTTCTTCACCTCCATGATATGTACAAGTAAATAACATACCAGTGGGAAACTTT