Contig 002756:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028D12Sequence502002756 (17)ref|XP_011100338.1|6e-37PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum]663002756 (17)gb|ABV24460.1|1e-29chloroplast-localized protein [Nicotiana benthamiana]
JMFF047F04Sequence583002756 (17)ref|XP_011100338.1|2e-65PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum]437002756 (17)ref|XP_009774759.1|2e-17PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris]
JMFS121C06Sequence573002756 (17)ref|XP_011100338.1|6e-57PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum]
JMSF003K12Sequence340002756 (17)gb|EYU26097.1|8e-22hypothetical protein MIMGU_mgv1a011040mg [Erythranthe guttata]777002756 (17)gb|ABV24460.1|2e-96chloroplast-localized protein [Nicotiana benthamiana]
JMSF009O09Sequence252002756 (17)710002756 (17)ref|XP_009774759.1|1e-84PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris]
JMSF011O14Sequence744002756 (17)gb|ABV24460.1|8e-93chloroplast-localized protein [Nicotiana benthamiana]
JMSF012H22Sequence719002756 (17)gb|ABV24460.1|4e-83chloroplast-localized protein [Nicotiana benthamiana]
JMSF024P19Sequence651002756 (17)ref|NP_001275338.1|3e-82protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum] sp|Q7XAB8.1|THF1721002756 (17)ref|XP_009774759.1|2e-98PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris]
JMSF025P19Sequence598002756 (17)ref|NP_001275338.1|1e-80protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum] sp|Q7XAB8.1|THF1666002756 (17)gb|ABV24460.1|8e-85chloroplast-localized protein [Nicotiana benthamiana]
JMSF050I23Sequence651002756 (17)ref|XP_011100338.1|4e-92PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum]765002756 (17)ref|XP_009774759.1|4e-108PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF009O09- AGA
JMFF028D12- TAAAATCCAAACCTCACCTTCGATTTCGTTTTCGTTTTCCAGAAAGA
JMFS121C06- TCACCTTCGATTTCGTTTTCGTTTTCCAGAAAGA
JMFF047F04- AGA
                      ____________________________________________________________
consensus TAAAATCCAAACCTCACCTTCGATTTCGTTTTCGTTTTCCAGAAAGA
 
. : . : . : . : . : . :
JMSF009O09- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMFF028D12- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMFS121C06- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMFF047F04- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMSF003K12- GGAGGAAATC
JMSF025P19- GGAGGAAATC
JMSF024P19- GGAGGAAATC
JMSF050I23- GGAGGAAATC
                      ____________________________________________________________
consensus ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
 
. : . : . : . : . : . :
JMSF009O09- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMFF028D12- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMFS121C06- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMFF047F04- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF003K12- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF025P19- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF024P19- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF050I23- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
                      ____________________________________________________________
consensus CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
 
. : . : . : . : . : . :
JMSF009O09- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMFF028D12- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMFS121C06- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMFF047F04- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF003K12- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF025P19- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF024P19- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF050I23- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
                      ____________________________________________________________
consensus CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
 
. : . : . : . : . : . :
JMSF009O09- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMFF028D12- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMFS121C06- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMFF047F04- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF003K12- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF025P19- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF024P19- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF050I23- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
                      ____________________________________________________________
consensus TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
 
. : . : . : . : . : . :
JMSF009O09- GAT
JMFF028D12- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMFS121C06- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMFF047F04- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF003K12- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF025P19- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF024P19- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF050I23- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
                      ____________________________________________________________
consensus GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
 
. : . : . : . : . : . :
JMFF028D12- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMFS121C06- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMFF047F04- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF003K12- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF025P19- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF024P19- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF050I23- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
                      ____________________________________________________________
consensus ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
 
. : . : . : . : . : . :
JMFF028D12- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMFS121C06- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMFF047F04- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMSF003K12- CGCCCGATTCCTAGTGTGTATAGTACTGTG
JMSF025P19- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMSF024P19- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMSF050I23- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
                      ____________________________________________________________
consensus CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
 
. : . : . : . : . : . :
JMFF028D12- ATGAGGTACAAGAAATCATATCAATATGATCCTGT
JMFS121C06- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMFF047F04- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMSF025P19- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMSF024P19- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMSF050I23- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
rJMSF024P19+ GTA
rJMSF012H22+ TGTTACTGTA
rJMSF050I23+ GAAATCATATCCATATGATCCTGTGNTTGCCCTTGGGTTTGTTACNGTA
rJMSF011O14+ CTGTGTTTGCCCNTGGGTTTGGTACTGTA
                      ____________________________________________________________
consensus ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
 
. : . : . : . : . : . :
JMFS121C06- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMFF047F04- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMSF025P19- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMSF024P19- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMSF050I23- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF024P19+ TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF012H22+ TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF050I23+ TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF011O14+ TATGATAGACTCA-GGAAGGTTATCCANCTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF009O09+ GACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGAGGGCCATTTTCAGGGC
rJMSF025P19+ TTTCAGGGC
rJMSF003K12+ ATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
                      ____________________________________________________________
consensus TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
 
. : . : . : . : . : . :
JMFF047F04- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATAT
JMSF025P19- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
JMSF024P19- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
JMSF050I23- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF024P19+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF012H22+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF050I23+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF011O14+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF009O09+ ATATATTAAGGCANTAAATGAGGAGCNTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF025P19+ ATATATTAAGGCACTAAATGAGGAGCNTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF003K12+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
                      ____________________________________________________________
consensus ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
 
. : . : . : . : . : . :
JMSF025P19- AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGNTGACTTTTCATCC
JMSF024P19- AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGGAAAGGAG
JMSF050I23- AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF024P19+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF012H22+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF050I23+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF011O14+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF009O09+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF025P19+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF003K12+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
                      ____________________________________________________________
consensus AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
 
. : . : . : . : . : . :
JMSF024P19- AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGA
JMSF050I23- AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAG
rJMSF024P19+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF012H22+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF050I23+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF011O14+ AAGNTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF009O09+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF025P19+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF003K12+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
                      ____________________________________________________________
consensus AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
 
. : . : . : . : . : . :
rJMSF024P19+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF012H22+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF050I23+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF011O14+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF009O09+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF025P19+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF003K12+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
                      ____________________________________________________________
consensus ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
 
. : . : . : . : . : . :
rJMSF024P19+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF012H22+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF050I23+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF011O14+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF009O09+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF025P19+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMFF028D12+ AGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMFF047F04+ GAACAAACAAAGTGTGGACCGGG
rJMSF003K12+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
                      ____________________________________________________________
consensus CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
 
. : . : . : . : . : . :
rJMSF024P19+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF012H22+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF050I23+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF011O14+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF009O09+ NTCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF025P19+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMFF028D12+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMFF047F04+ ATTTTGATGTTTATCGCAACTTACTCTTTAAGGTGGTTCAGGGTAAAGAGCTATTAAAGG
rJMSF003K12+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
                      ____________________________________________________________
consensus ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
 
. : . : . : . : . : . :
rJMSF024P19+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF012H22+ AATATGTGGCC-------AGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF050I23+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF011O14+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF009O09+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF025P19+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMFF028D12+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMFF047F04+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAGGGGAATCTCAGAAGTTTAATGGGG
rJMSF003K12+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
                      ____________________________________________________________
consensus AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
 
. : . : . : . : . : . :
rJMSF024P19+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF012H22+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF050I23+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF011O14+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF009O09+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF025P19+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMFF028D12+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMFF047F04+ CTGTTCCAAAATGTTTGGGGCAATAGGAGAGGGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF003K12+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
                      ____________________________________________________________
consensus CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
 
. : . : . : . : . : . :
rJMSF024P19+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF012H22+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF050I23+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF011O14+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF009O09+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF025P19+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMFF028D12+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMFF047F04+ CTCCCCGGGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF003K12+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
                      ____________________________________________________________
consensus CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
 
. : . : . : . : . : . :
rJMSF024P19+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF012H22+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF050I23+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF011O14+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF009O09+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF025P19+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMFF028D12+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMFF047F04+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF003K12+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
                      ____________________________________________________________
consensus TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
 
. : . : . : . : . : . :
rJMSF024P19+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF012H22+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF050I23+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF011O14+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF009O09+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF025P19+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMFF028D12+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTATGT
rJMFF047F04+ AGATGTGATTTTAGAGATTTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCGGTATGT
rJMSF003K12+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTATGT
                      ____________________________________________________________
consensus AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTATGT
 
. : . : . : . : . : . :
rJMFF028D12+ AATTTCTTCTTCAAGCAAGTGCAACTAAGAAT
rJMFF047F04+ AATTTTTTTTTCAAGCAAGTGCAACTAAGAATTAATTACAAGGAACAACTTCAT
rJMSF003K12+ AATTTCTTCTTCAAGCAAGTGCAACTAAGAATTAATTACAAGGAACAACTTCATCTCGCA
                      ____________________________________________________________
consensus AATTTCTTCTTCAAGCAAGTGCAACTAAGAATTAATTACAAGGAACAACTTCATCTCGCA