| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028D12 | Sequence | 502 | 002756 (17) | ref|XP_011100338.1| | 6e-37 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum] | 663 | 002756 (17) | gb|ABV24460.1| | 1e-29 | chloroplast-localized protein [Nicotiana benthamiana] |
| JMFF047F04 | Sequence | 583 | 002756 (17) | ref|XP_011100338.1| | 2e-65 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum] | 437 | 002756 (17) | ref|XP_009774759.1| | 2e-17 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris] |
| JMFS121C06 | Sequence | 573 | 002756 (17) | ref|XP_011100338.1| | 6e-57 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum] | |||||
| JMSF003K12 | Sequence | 340 | 002756 (17) | gb|EYU26097.1| | 8e-22 | hypothetical protein MIMGU_mgv1a011040mg [Erythranthe guttata] | 777 | 002756 (17) | gb|ABV24460.1| | 2e-96 | chloroplast-localized protein [Nicotiana benthamiana] |
| JMSF009O09 | Sequence | 252 | 002756 (17) | 710 | 002756 (17) | ref|XP_009774759.1| | 1e-84 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris] | |||
| JMSF011O14 | Sequence | 744 | 002756 (17) | gb|ABV24460.1| | 8e-93 | chloroplast-localized protein [Nicotiana benthamiana] | |||||
| JMSF012H22 | Sequence | 719 | 002756 (17) | gb|ABV24460.1| | 4e-83 | chloroplast-localized protein [Nicotiana benthamiana] | |||||
| JMSF024P19 | Sequence | 651 | 002756 (17) | ref|NP_001275338.1| | 3e-82 | protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum] sp|Q7XAB8.1|THF1 | 721 | 002756 (17) | ref|XP_009774759.1| | 2e-98 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris] |
| JMSF025P19 | Sequence | 598 | 002756 (17) | ref|NP_001275338.1| | 1e-80 | protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum] sp|Q7XAB8.1|THF1 | 666 | 002756 (17) | gb|ABV24460.1| | 8e-85 | chloroplast-localized protein [Nicotiana benthamiana] |
| JMSF050I23 | Sequence | 651 | 002756 (17) | ref|XP_011100338.1| | 4e-92 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Sesamum indicum] | 765 | 002756 (17) | ref|XP_009774759.1| | 4e-108 | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF009O09- AGA
JMFF028D12- TAAAATCCAAACCTCACCTTCGATTTCGTTTTCGTTTTCCAGAAAGA
JMFS121C06- TCACCTTCGATTTCGTTTTCGTTTTCCAGAAAGA
JMFF047F04- AGA
____________________________________________________________
consensus TAAAATCCAAACCTCACCTTCGATTTCGTTTTCGTTTTCCAGAAAGA
. : . : . : . : . : . :
JMSF009O09- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMFF028D12- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMFS121C06- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMFF047F04- ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
JMSF003K12- GGAGGAAATC
JMSF025P19- GGAGGAAATC
JMSF024P19- GGAGGAAATC
JMSF050I23- GGAGGAAATC
____________________________________________________________
consensus ATTTTCTCATTTTTCTCTTATAGATATGGAAATTTAACTACTTCCGCTTCTGAGGAAATC
. : . : . : . : . : . :
JMSF009O09- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMFF028D12- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMFS121C06- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMFF047F04- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF003K12- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF025P19- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF024P19- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
JMSF050I23- CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
____________________________________________________________
consensus CATTTGTCACTTCATATCCTTTTCCCCCCGAAAGCTCCAGCAATGGCCGCCGTTACTTCA
. : . : . : . : . : . :
JMSF009O09- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMFF028D12- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMFS121C06- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMFF047F04- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF003K12- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF025P19- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF024P19- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
JMSF050I23- CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
____________________________________________________________
consensus CTCTCCTTCTCGGCGATCGGTCAATCGCCGGACCGGAAGGCGTTCAATGCTTCTTCCTCC
. : . : . : . : . : . :
JMSF009O09- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMFF028D12- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMFS121C06- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMFF047F04- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF003K12- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF025P19- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF024P19- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
JMSF050I23- TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
____________________________________________________________
consensus TCAGCTCGCTGCTTGTCCTCCACTTCCGATGCGTTTCGCTTCCGCACCAACTTCGCCTTC
. : . : . : . : . : . :
JMSF009O09- GAT
JMFF028D12- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMFS121C06- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMFF047F04- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF003K12- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF025P19- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF024P19- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
JMSF050I23- GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
____________________________________________________________
consensus GATTCTCTCAATTTCCGCACTTCGAGTTCGGGTTCGGGCTCGCGCATGGTAGTTCACTGC
. : . : . : . : . : . :
JMFF028D12- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMFS121C06- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMFF047F04- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF003K12- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF025P19- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF024P19- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
JMSF050I23- ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
____________________________________________________________
consensus ATGTCCACAGATGTGCCCACTGTGTCAGAGACAAAAACGAATTTCTTGAGGGCTTACAAA
. : . : . : . : . : . :
JMFF028D12- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMFS121C06- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMFF047F04- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMSF003K12- CGCCCGATTCCTAGTGTGTATAGTACTGTG
JMSF025P19- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMSF024P19- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
JMSF050I23- CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
____________________________________________________________
consensus CGCCCGATTCCTAGTGTGTATAGTACTGTGCTACAAGAACTGATAGTGCAGCAACATTTG
. : . : . : . : . : . :
JMFF028D12- ATGAGGTACAAGAAATCATATCAATATGATCCTGT
JMFS121C06- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMFF047F04- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMSF025P19- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMSF024P19- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
JMSF050I23- ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
rJMSF024P19+ GTA
rJMSF012H22+ TGTTACTGTA
rJMSF050I23+ GAAATCATATCCATATGATCCTGTGNTTGCCCTTGGGTTTGTTACNGTA
rJMSF011O14+ CTGTGTTTGCCCNTGGGTTTGGTACTGTA
____________________________________________________________
consensus ATGAGGTACAAGAAATCATATCAATATGATCCTGTGTTTGCCCTTGGGTTTGTTACTGTA
. : . : . : . : . : . :
JMFS121C06- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMFF047F04- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMSF025P19- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMSF024P19- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
JMSF050I23- TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF024P19+ TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF012H22+ TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF050I23+ TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF011O14+ TATGATAGACTCA-GGAAGGTTATCCANCTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
rJMSF009O09+ GACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGAGGGCCATTTTCAGGGC
rJMSF025P19+ TTTCAGGGC
rJMSF003K12+ ATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
____________________________________________________________
consensus TATGATAGACTCATGGAAGGTTATCCAACTGAAGAGGATAAGGA-GGCCATTTTCAGGGC
. : . : . : . : . : . :
JMFF047F04- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATAT
JMSF025P19- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
JMSF024P19- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
JMSF050I23- ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF024P19+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF012H22+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF050I23+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF011O14+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF009O09+ ATATATTAAGGCANTAAATGAGGAGCNTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF025P19+ ATATATTAAGGCACTAAATGAGGAGCNTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
rJMSF003K12+ ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
____________________________________________________________
consensus ATATATTAAGGCACTAAATGAGGAGCCTGAGCAATATAGAGCTGATGCACAAAAGTTAGA
. : . : . : . : . : . :
JMSF025P19- AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGNTGACTTTTCATCC
JMSF024P19- AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGGAAAGGAG
JMSF050I23- AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF024P19+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF012H22+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF050I23+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF011O14+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF009O09+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF025P19+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
rJMSF003K12+ AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
____________________________________________________________
consensus AGAGTGGGCACGCGCTCAGGATGGCAATAGCCTAGTTGACTTTTCATCCAGGG-AAGGAG
. : . : . : . : . : . :
JMSF024P19- AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGA
JMSF050I23- AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAG
rJMSF024P19+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF012H22+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF050I23+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF011O14+ AAGNTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF009O09+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF025P19+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
rJMSF003K12+ AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
____________________________________________________________
consensus AAGTTGAAAGCATACTAAAAGACATCTCGGAAAGGGCTGGGAGCAAAGATAGTTTTAGAT
. : . : . : . : . : . :
rJMSF024P19+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF012H22+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF050I23+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF011O14+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF009O09+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF025P19+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
rJMSF003K12+ ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
____________________________________________________________
consensus ACAGTCGGTTCTTTGCAATTGGACTCTTCCGCCTACTTGAGTTATCAAATGCAACTGATC
. : . : . : . : . : . :
rJMSF024P19+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF012H22+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF050I23+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF011O14+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF009O09+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMSF025P19+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMFF028D12+ AGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
rJMFF047F04+ GAACAAACAAAGTGTGGACCGGG
rJMSF003K12+ CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
____________________________________________________________
consensus CAACCATTCTAGAGAAGCTTTGTGCTGCCCTGAATGTGAACAAACAAAGTGTAGACCGGG
. : . : . : . : . : . :
rJMSF024P19+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF012H22+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF050I23+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF011O14+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF009O09+ NTCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMSF025P19+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMFF028D12+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
rJMFF047F04+ ATTTTGATGTTTATCGCAACTTACTCTTTAAGGTGGTTCAGGGTAAAGAGCTATTAAAGG
rJMSF003K12+ ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
____________________________________________________________
consensus ATCTTGATGTTTATCGCAACTTACTCTCTAAGCTGGTTCAGGCTAAAGAGCTATTAAAGG
. : . : . : . : . : . :
rJMSF024P19+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF012H22+ AATATGTGGCC-------AGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF050I23+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF011O14+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF009O09+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMSF025P19+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMFF028D12+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
rJMFF047F04+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAGGGGAATCTCAGAAGTTTAATGGGG
rJMSF003K12+ AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
____________________________________________________________
consensus AATATGTGGCCAGGGAGAAGAAGAAAAGGGGAGAAAGGGAATCTCAGAAGTCTAATGAGG
. : . : . : . : . : . :
rJMSF024P19+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF012H22+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF050I23+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF011O14+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF009O09+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF025P19+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMFF028D12+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
rJMFF047F04+ CTGTTCCAAAATGTTTGGGGCAATAGGAGAGGGTAGCTCGGTAATTCAAATATATTCCTT
rJMSF003K12+ CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
____________________________________________________________
consensus CTGTTACAAAATGTTTGGGGCAATACGAGAGTGTAGCTCGGTAATTCAAATATATTCCTT
. : . : . : . : . : . :
rJMSF024P19+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF012H22+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF050I23+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF011O14+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF009O09+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF025P19+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMFF028D12+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMFF047F04+ CTCCCCGGGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
rJMSF003K12+ CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
____________________________________________________________
consensus CTCCCCGCGTGGTCCTCGTTGACATTTTCCTGCTGTAAACTGTTTAATGTATAATAGAGT
. : . : . : . : . : . :
rJMSF024P19+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF012H22+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF050I23+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF011O14+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF009O09+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF025P19+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMFF028D12+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMFF047F04+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
rJMSF003K12+ TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
____________________________________________________________
consensus TTGGATCTCCAGAAGCTCAGGCAACCTGCAAATCTGTAATGGAATTTTAATCACAATCCT
. : . : . : . : . : . :
rJMSF024P19+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF012H22+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF050I23+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF011O14+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF009O09+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMSF025P19+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTAT
rJMFF028D12+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTATGT
rJMFF047F04+ AGATGTGATTTTAGAGATTTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCGGTATGT
rJMSF003K12+ AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTATGT
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consensus AGATGTGATTTTAGAGATCTATCCTTTAATTATTTTCCCAAATAGAAAGTTGCTGTATGT
. : . : . : . : . : . :
rJMFF028D12+ AATTTCTTCTTCAAGCAAGTGCAACTAAGAAT
rJMFF047F04+ AATTTTTTTTTCAAGCAAGTGCAACTAAGAATTAATTACAAGGAACAACTTCAT
rJMSF003K12+ AATTTCTTCTTCAAGCAAGTGCAACTAAGAATTAATTACAAGGAACAACTTCATCTCGCA
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consensus AATTTCTTCTTCAAGCAAGTGCAACTAAGAATTAATTACAAGGAACAACTTCATCTCGCA