Contig 002749:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A17Sequence589009117 (12)emb|CDP09484.1|8e-106unnamed protein product [Coffea canephora]805002749 (10)dbj|BAC22124.1|2e-118t-complex polypeptide 1 [Bruguiera sexangula]
JMFF028J13Sequence560009117 (12)emb|CDP09484.1|5e-98unnamed protein product [Coffea canephora]628002749 (10)ref|XP_010089252.1|3e-77T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFF029K01Sequence437009117 (12)gb|KDO55004.1|3e-66hypothetical protein CISIN_1g015935mg [Citrus sinensis]747002749 (10)ref|XP_010089252.1|3e-101T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFF037N03Sequence597009117 (12)gb|KDO55004.1|6e-107hypothetical protein CISIN_1g015935mg [Citrus sinensis]762002749 (10)ref|XP_010089252.1|1e-112T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFF044A21Sequence628009117 (12)gb|KDO55004.1|3e-113hypothetical protein CISIN_1g015935mg [Citrus sinensis]582002749 (10)ref|XP_010089252.1|2e-64T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFS145C07Sequence625002749 (10)dbj|BAC22124.1|1e-127t-complex polypeptide 1 [Bruguiera sexangula]
JMSF002F16Sequence264009117 (12)gb|KDO55004.1|1e-24hypothetical protein CISIN_1g015935mg [Citrus sinensis]769002749 (10)ref|XP_010089252.1|8e-104T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMSF019H12Sequence541009117 (12)emb|CDP09484.1|2e-93unnamed protein product [Coffea canephora]774002749 (10)dbj|BAC22124.1|1e-118t-complex polypeptide 1 [Bruguiera sexangula]
JMSF029G02Sequence661009117 (12)gb|KDO55004.1|7e-120hypothetical protein CISIN_1g015935mg [Citrus sinensis]755002749 (10)ref|XP_010089252.1|2e-115T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMSF052C06Sequence664009117 (12)emb|CDP09484.1|2e-123unnamed protein product [Coffea canephora]896002749 (10)dbj|BAC22124.1|1e-133t-complex polypeptide 1 [Bruguiera sexangula]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS145C07- GAGAACTGATATGACAAAAGAACGCATTGAGAAGCTTCTAAAAGCTGGA
                      ____________________________________________________________
consensus GAGAACTGATATGACAAAAGAACGCATTGAGAAGCTTCTAAAAGCTGGA
 
. : . : . : . : . : . :
JMFS145C07- GCCAATGTTATATTGACTTCCAAAGGAATTGATGACATGGCACTCAAGTACTTTGTGGAA
                      ____________________________________________________________
consensus GCCAATGTTATATTGACTTCCAAAGGAATTGATGACATGGCACTCAAGTACTTTGTGGAA
 
. : . : . : . : . : . :
JMFS145C07- GCTGGTGCAATTGCAGTTAGACGGGTTCGTAAGGAAGATTTGCGTCATGTTGCCAAGGCT
                      ____________________________________________________________
consensus GCTGGTGCAATTGCAGTTAGACGGGTTCGTAAGGAAGATTTGCGTCATGTTGCCAAGGCT
 
. : . : . : . : . : . :
JMFS145C07- ACTGGTGCAACTGTGGTCTCAACATTTGCAGATATGGAAGGAGAAGAAACATTTGAAGCG
rJMSF052C06+ TGGTGCAACTGTGGTCTCAACATTTGCAGATATGGAAGGAGAAGAAACATTTGAAGCG
                      ____________________________________________________________
consensus ACTGGTGCAACTGTGGTCTCAACATTTGCAGATATGGAAGGAGAAGAAACATTTGAAGCG
 
. : . : . : . : . : . :
JMFS145C07- TCACTCCTTGGACAGGCAGAAGAGGTTGTTGAGGAGCGCATTGCTGATGACGATGTTATT
rJMFF012A17+ GGACAGGCAGAAGAGGTTGTTGAGGAGCGCATTGCTGATGACGATGTTATT
rJMSF029G02+ GTTGAGGAGCGCATTGCTGATGACGATGTTATT
rJMSF019H12+ GGACAGGCAGAAGAGGTTGTTGAGGAGCGCATTGCTGATGACGATGTTATT
rJMFF037N03+ GGAGCGCATTGCTGATGACGATGTTATT
rJMSF052C06+ TCACTCCTTGGACAGGCAGAAGAGGTTGTTGAGGAGCGCATTGCTGATGACGATGTTATT
                      ____________________________________________________________
consensus TCACTCCTTGGACAGGCAGAAGAGGTTGTTGAGGAGCGCATTGCTGATGACGATGTTATT
 
. : . : . : . : . : . :
JMFS145C07- ATGATTAAAGGGACTAAAACCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
rJMFF012A17+ ATGATTAAAGGGACTAAAACCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
rJMSF029G02+ ATGATTAAAGGGACTAAAACCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
rJMSF019H12+ ATGATTAAAGGGACTAAAACCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
rJMFF037N03+ ATGATTAAAGGGACTAAAACCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
rJMSF052C06+ ATGATTAAAGGGACTAAAACCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
rJMFF029K01+ CACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
rJMSF002F16+ GACTAAANCCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
                      ____________________________________________________________
consensus ATGATTAAAGGGACTAAAACCACTAGTGCGGTTTCAGTGATACTTAGGGGAGCAAATGAC
 
. : . : . : . : . : . :
JMFS145C07- TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
rJMFF012A17+ TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
rJMSF029G02+ TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
rJMSF019H12+ TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
rJMFF037N03+ TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
rJMSF052C06+ TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
rJMFF029K01+ TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
rJMSF002F16+ TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
                      ____________________________________________________________
consensus TTTATGCTTGATGAGATGGAGAGGGCCCTGCATGACTCTTTATGCATTGTTAAGAGAACA
 
. : . : . : . : . : . :
JMFS145C07- TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMFF012A17+ TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMSF029G02+ TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMSF019H12+ TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMFF037N03+ TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMSF052C06+ TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMFF029K01+ TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMFF028J13+ CCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
rJMSF002F16+ TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
                      ____________________________________________________________
consensus TTAGAATCCACAACTGTTGTTGCTGGTGGAGGTGCTGTTGAGTCTGCCTTATCAGTTTAC
 
. : . : . : . : . : . :
JMFS145C07- CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMFF012A17+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMSF029G02+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMSF019H12+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMFF037N03+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMSF052C06+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMFF029K01+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMFF028J13+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMFF044A21+ GTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
rJMSF002F16+ CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
                      ____________________________________________________________
consensus CTGGAGTACCTTGCAACTACACTTGGATCTCGGGAGCAACTGGCAATTGCTGAATTTGCC
 
. : . : . : . : . : . :
JMFS145C07- GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMFF012A17+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMSF029G02+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMSF019H12+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMFF037N03+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMSF052C06+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMFF029K01+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGTATTCGACCGAG
rJMFF028J13+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMFF044A21+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
rJMSF002F16+ GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
                      ____________________________________________________________
consensus GAATCCTTATTGATCATTCCAAAGGTACTTGCTGTCAATGCTGCTAAGGATTCGACCGAG
 
. : . : . : . : . : . :
JMFS145C07- TTGGTTTCTCAATTACGTGCACATCACCATTATGCA
rJMFF012A17+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMSF029G02+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMSF019H12+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMFF037N03+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMSF052C06+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMFF029K01+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMFF028J13+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMFF044A21+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
rJMSF002F16+ TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
                      ____________________________________________________________
consensus TTGGTTTCTCAATTACGTGCACATCACCATTATGCACAAACACAGGCAGATAAGAAACAT
 
. : . : . : . : . : . :
rJMFF012A17+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
rJMSF029G02+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATTGTACGTAACAACTTGGAAGCTGGA
rJMSF019H12+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
rJMFF037N03+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
rJMSF052C06+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
rJMFF029K01+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
rJMFF028J13+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
rJMFF044A21+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
rJMSF002F16+ TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
                      ____________________________________________________________
consensus TGGTCGAGCATGGGACTAGACCTAGTGAAGGGAATCGTACGTAACAACTTGGAAGCTGGA
 
. : . : . : . : . : . :
rJMFF012A17+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMSF029G02+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMSF019H12+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMFF037N03+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMSF052C06+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMFF029K01+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMFF028J13+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMFF044A21+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
rJMSF002F16+ GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
                      ____________________________________________________________
consensus GTAATTGAGCCTGCTATGAGTAAAGTGAAGATAATCCAATTTGCAACTGAAGCTGCTATC
 
. : . : . : . : . : . :
rJMFF012A17+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
rJMSF029G02+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
rJMSF019H12+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
rJMFF037N03+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGGAAGTCAGAATGAGGAA
rJMSF052C06+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
rJMFF029K01+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
rJMFF028J13+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
rJMFF044A21+ ACAATTTTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
rJMSF002F16+ ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
                      ____________________________________________________________
consensus ACAATTCTTCGAATCGACGACATGATAAAGCTCTTCAAAGATGAAAGTCAGAATGAGGAA
 
. : . : . : . : . : . :
rJMFF012A17+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMSF029G02+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMSF019H12+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMFF037N03+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMSF052C06+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMFF029K01+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMFF028J13+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMFF044A21+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
rJMSF002F16+ TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
                      ____________________________________________________________
consensus TAGGGTTATATATTTTCACAGTTTCTGAACGAGTAAGTTGATGATTCGTAGGGGAGATGT
 
. : . : . : . : . : . :
rJMFF012A17+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMSF029G02+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMSF019H12+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMFF037N03+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMSF052C06+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMFF029K01+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMFF028J13+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMFF044A21+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
rJMSF002F16+ AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
                      ____________________________________________________________
consensus AACATTGCCATCCATTTGATTTGTGAGCCGTGAAATGATGTTTCCCAGGCTGCCTGCTTG
 
. : . : . : . : . : . :
rJMFF012A17+ -TTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
rJMSF029G02+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCAC
rJMSF019H12+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTT
rJMFF037N03+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
rJMSF052C06+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
rJMFF029K01+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
rJMFF028J13+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
rJMFF044A21+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
rJMSF002F16+ TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
                      ____________________________________________________________
consensus TTTTATTCTGAACTTGTGTGATTGTGATACAAAGACTTTAATCCACTGTCAGCAAATTTT
 
. : . : . : . : . : . :
rJMFF012A17+ GAAGTACTCTTAACTTTATTTGTA
rJMFF037N03+ GAAGTACTCTTAAC
rJMSF052C06+ GAAGTACTCTTAACTTTATTTGTATGAAAAACCAAGTATTCGCAATTTCTAAGCCGTT
rJMFF029K01+ GAAGTACTCTTAACTTTATTTGTATGAAAAACCAAGTATTCGCAATT
rJMFF028J13+ GAAGTACTCTTAACTTTATTTGTA
rJMFF044A21+ GAAGTACTCTTAACTTTATTTGTATGAAAAACCAAGTATTCGCAATT
rJMSF002F16+ GAAGTACTCTTAACTTTATTTGTATGAAAAACCAAGTATTCGCAATTTCTAAGCCGTTCC
                      ____________________________________________________________
consensus GAAGTACTCTTAACTTTATTTGTATGAAAAACCAAGTATTCGCAATTTCTAAGCCGTTCC