Contig 002747:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002D16+                                                                   CTT
                      ____________________________________________________________
consensus                                                                      CTT
 
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rJMSF003B09+                                    CTCTTCGTGCAGGAAATGTGCAGCCTTACACGTT
rJMSF002D16+          CAAAGCCGACCCCAGGGACACTCCTGCTCTTCGTGCAGGAAATGTGCAGCCTTACACGTT
                      ____________________________________________________________
consensus             CAAAGCCGACCCCAGGGACACTCCTGCTCTTCGTGCAGGAAATGTGCAGCCTTACACGTT
 
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rJMSF003B09+          TATGCTTCCTCCTACATGGAAGCAGACCCGTGTAGCCAACATATTGTCTGGAAATTACTG
rJMSF002D16+          TATGCTTCCTCCTACATGGAAGCAGACCCGTGTAGCCAACATATTGTCTGGAAATTACTG
                      ____________________________________________________________
consensus             TATGCTTCCTCCTACATGGAAGCAGACCCGTGTAGCCAACATATTGTCTGGAAATTACTG
 
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rJMSF003B09+          CCAACCCAAGTGTGCCGAGCCCTGGATTGAGGTGAAATTTGAGGATGAAAAGCAGGGAAA
rJMSF002D16+          CCAACCCAAGTGTGCCGAGCCCTGGATTGAGGTGAAATTTGAGGATGAAAAGCAGGGAAA
                      ____________________________________________________________
consensus             CCAACCCAAGTGTGCCGAGCCCTGGATTGAGGTGAAATTTGAGGATGAAAAGCAGGGAAA
 
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rJMSF003B09+          GGTGCAGGTGGTGGCCTCTCCTTTGATACGCCTTACAAATAAACCCAATGCCACAATCGA
rJMSF002D16+          GGTGCAGGTGGTGGCCTCTCCTTTGATACGCCTTACAAATAAACCCAATGCCACAATCGA
                      ____________________________________________________________
consensus             GGTGCAGGTGGTGGCCTCTCCTTTGATACGCCTTACAAATAAACCCAATGCCACAATCGA
 
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rJMSF003B09+          GGACATAGGGACCCCTGAGAAGGTCATCGCTTCTCTCGGCCCTTTTGTCACTGGGAACAC
rJMSF002D16+          GGACATAGGGACCCCTGAGAAGGTCATCGCTTCTCTCGGCCCTTTTGTCACTGGGAACAC
                      ____________________________________________________________
consensus             GGACATAGGGACCCCTGAGAAGGTCATCGCTTCTCTCGGCCCTTTTGTCACTGGGAACAC
 
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rJMSF003B09+          ATTAGACCCTGATGAACTCCTCGAAACTTCCATTGAGAAGCGTGGTGATCTGACGTACTA
rJMSF002D16+          ATTAGACCCTGATGAACTCCTCGAAACTTCCATTGAGAAGCGTGGTGATCTGACGTACTA
                      ____________________________________________________________
consensus             ATTAGACCCTGATGAACTCCTCGAAACTTCCATTGAGAAGCGTGGTGATCTGACGTACTA
 
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rJMSF003B09+          CAAATATGTTCTCGACACTCCATATGCTCTGACCGGATCACACAATCTTGCCAAGGCAAC
rJMSF002D16+          CAAATATGTTCTCGACACTCCATATGCTCTGACCGGATCACACAATCTTGCCAAGGCAAC
                      ____________________________________________________________
consensus             CAAATATGTTCTCGACACTCCATATGCTCTGACCGGATCACACAATCTTGCCAAGGCAAC
 
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rJMSF003B09+          AGCGAAGGGGAACACGGTTGTCCTGTTTGTGGCTAGTGCCAATGAGAAACAGTGGCAGTC
rJMSF002D16+          AGCGAAGGGGAACACGGTTGTCCTGTTTGTGGCTAGTGCCAATGAGAAACAGTGGCAGTC
                      ____________________________________________________________
consensus             AGCGAAGGGGAACACGGTTGTCCTGTTTGTGGCTAGTGCCAATGAGAAACAGTGGCAGTC
 
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rJMSF003B09+          ATCACAGAAAACTTTAGAAGCCATCCTTGATTCCTTTGAAGTGTAGTTTCTTACCTACAA
rJMSF002D16+          ATCACAGAAAACTTTAGAAGCCATCCTTGATTCCTTTGAAGTGTAGTTTCTTACCTACAA
                      ____________________________________________________________
consensus             ATCACAGAAAACTTTAGAAGCCATCCTTGATTCCTTTGAAGTGTAGTTTCTTACCTACAA
 
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rJMSF003B09+          AAGACGAAATTCCCTCGCTCTAGGGCCCCACACCCCGGCCTAACAGGGCACGTAATAACA
rJMSF002D16+          AAGACGAAATTCCCTCGCTCTAGGGCCCCACACCCCGGCCTAACAGGGCACGTAATAACA
                      ____________________________________________________________
consensus             AAGACGAAATTCCCTCGCTCTAGGGCCCCACACCCCGGCCTAACAGGGCACGTAATAACA
 
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rJMSF003B09+          TGTTTATAGAGAACTCACTGCTTAATCCCCTGTTGTTGTGTCTATCTTAGTTTCACTGTT
rJMSF002D16+          TGTTTATAGAGAACTCACTGCTTAATCCCCTGTTGTTGTGTCTATCTTAGTTTCACTGTT
                      ____________________________________________________________
consensus             TGTTTATAGAGAACTCACTGCTTAATCCCCTGTTGTTGTGTCTATCTTAGTTTCACTGTT
 
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rJMSF003B09+          TTTACTTTTTGTTTTGTACTTGGTAATAATAGCATGTATAGACATTATACT         
rJMSF002D16+          TTTACTTTTTGTTTTGTACTTGGTAATAATAGCATGTATAGACATTATACTGAAACTGAA
                      ____________________________________________________________
consensus             TTTACTTTTTGTTTTGTACTTGGTAATAATAGCATGTATAGACATTATACTGAAACTGAA