Contig 002736:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001L12Sequence553000247 (5)ref|XP_006361688.1|194PREDICTED: serine carboxypeptidase-like 49-like [Solanum tuberosum]675002736 (5)ref|XP_009794794.1|2e-45PREDICTED: serine carboxypeptidase-like [Nicotiana sylvestris]
JMFF018B03Sequence660002736 (5)ref|XP_009794794.1|1e-80PREDICTED: serine carboxypeptidase-like [Nicotiana sylvestris]
JMFF044D18Sequence652000247 (5)ref|XP_006361688.1|171PREDICTED: serine carboxypeptidase-like 49-like [Solanum tuberosum]608002736 (5)ref|XP_004250045.1|2e-96PREDICTED: serine carboxypeptidase-like [Solanum lycopersicum]
JMFF050N02Sequence639000247 (5)ref|XP_006361688.1|238PREDICTED: serine carboxypeptidase-like 49-like [Solanum tuberosum]454002736 (5)ref|XP_004250045.1|3e-05PREDICTED: serine carboxypeptidase-like [Solanum lycopersicum]
JMFN005L06Sequence505002736 (5)gb|KJB74771.1|8e-82hypothetical protein B456_012G006300 [Gossypium raimondii]

Alignment

This contig is upended


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JMFN005L06-                                                            ATTACTGGAGA
                      ____________________________________________________________
consensus                                                              ATTACTGGAGA
 
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JMFN005L06-           ATATATGCTGGGCACTACATTCCCGCATTTGCTGCAAGGATATCACAAGGGAAACAAAGC
                      ____________________________________________________________
consensus             ATATATGCTGGGCACTACATTCCCGCATTTGCTGCAAGGATATCACAAGGGAAACAAAGC
 
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JMFN005L06-           CAATGAAGGGATTCATGTAAACCTCAAGGGATTTGCGATTGGTAATGGGCTCACAGATCC
                      ____________________________________________________________
consensus             CAATGAAGGGATTCATGTAAACCTCAAGGGATTTGCGATTGGTAATGGGCTCACAGATCC
 
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JMFN005L06-           AGCAATTCAATATAGAGCTTACCCTGATTATGCATTTGACATGGGAATAATTTCTGAGTC
                      ____________________________________________________________
consensus             AGCAATTCAATATAGAGCTTACCCTGATTATGCATTTGACATGGGAATAATTTCTGAGTC
 
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JMFN005L06-           TGATTGGCAAAGCATCAACAAGGTGGTCCCACTGTGTGAGGCTGCAATAAAACTATGTGG
                      ____________________________________________________________
consensus             TGATTGGCAAAGCATCAACAAGGTGGTCCCACTGTGTGAGGCTGCAATAAAACTATGTGG
 
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JMFN005L06-           AACTGATGGGACTATTACTTGTGTGGCATCCTACGTAGTTTGCAATGGCTTATTTAATGC
                      ____________________________________________________________
consensus             AACTGATGGGACTATTACTTGTGTGGCATCCTACGTAGTTTGCAATGGCTTATTTAATGC
 
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JMFN005L06-           TATTATCACACGTGCTGGTAATATCAATTACTATGACATCACAAAGAAGTGTGAGGGGCA
                      ____________________________________________________________
consensus             TATTATCACACGTGCTGGTAATATCAATTACTATGACATCACAAAGAAGTGTGAGGGGCA
 
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JMFN005L06-           TCTCTGCTATGACTTCTCAAGCATGGAACATATGCTCAATGAGAACTCTGTCAAAACAGC
rJMFF044D18+                                                                   AGC
                      ____________________________________________________________
consensus             TCTCTGCTATGACTTCTCAAGCATGGAACATATGCTCAATGAGAACTCTGTCAAAACAGC
 
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JMFN005L06-           TCTAGGAGTTGATGATATAGATTTTGTCTCGTGTAGTACTACTGTTTACCAGGCTATGCT
rJMFF044D18+          TCTAGGAGTTGATGATATAGATTTTGTCTCGTGTAGTACTACTGTTTACCAGGCTATGCT
rJMFF018B03+              GGAGTTGATGATATAGATTTTGTCTCGTGTAGTACTACTGTTTACCAGGCTATGCT
                      ____________________________________________________________
consensus             TCTAGGAGTTGATGATATAGATTTTGTCTCGTGTAGTACTACTGTTTACCAGGCTATGCT
 
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JMFN005L06-           TGTTGACTGGATGA                                              
rJMFF044D18+          TGTTGACTGGATGAGAAATCTTGAAGTGGGCATCCCTGCTTTGCTTGAGGATGGAATAAG
rJMFF018B03+          TGTTGACTGGATGAGAAATCTTGAAGTGGGCATCCCTGCTTTGCTTGAGGATGGAATAAG
                      ____________________________________________________________
consensus             TGTTGACTGGATGAGAAATCTTGAAGTGGGCATCCCTGCTTTGCTTGAGGATGGAATAAG
 
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rJMFF044D18+          GTTGCTTGTTTATGCTGGAGAGTATGATCTTATTTGCAACTGGCTTGGTAATTCGAGATG
rJMFF018B03+          GTTGCTTGTTTATGCTGGAGAGTATGATCTTATTTGCAACTGGCTTGGTAATTCGAGATG
rJMFF001L12+                                                  TGGCTTGGTAATTCGAGATG
                      ____________________________________________________________
consensus             GTTGCTTGTTTATGCTGGAGAGTATGATCTTATTTGCAACTGGCTTGGTAATTCGAGATG
 
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rJMFF044D18+          GGTTCATGCCATGAAATGGTCTGGTCAGAAAGAGTTTGTAGCATCTTCTGAAGTACCTTT
rJMFF018B03+          GGTTCATGCCATGAAATGGTCTGGTCAGAAAGAGTTTGTAGCATCTTCTGAAGTACCTTT
rJMFF001L12+          GGTTCATGCCATGAAATGGTCTGGTCAGAAAGAGTTTGTAGCATCTTCTGAAGTACCTTT
                      ____________________________________________________________
consensus             GGTTCATGCCATGAAATGGTCTGGTCAGAAAGAGTTTGTAGCATCTTCTGAAGTACCTTT
 
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rJMFF044D18+          TGAAGTTGATGGCTCAGAAGCAGGATTATTAAAAAGCCATGGACCTCTCAGTTTCCTCAA
rJMFF018B03+          TGAAGTTGATGGCTCAGAAGCAGGATTATTAAAAAGCCATGGACCTCTCAGTTTCCTCAA
rJMFF001L12+          TGAAGTTGATGGCTCAGAAGCAGGATTATTAAAAAGCCATGGACCTCTCAGTTTCCTCAA
                      ____________________________________________________________
consensus             TGAAGTTGATGGCTCAGAAGCAGGATTATTAAAAAGCCATGGACCTCTCAGTTTCCTCAA
 
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rJMFF044D18+          GGTCCATGATGCTGGACACATGGTTCCCATGGACCAGCCGAAAGCTGCACTCAACATGCT
rJMFF018B03+          GGTCCATGATGCTGGACACATGGTTCCCATGGACCAGCCGAAAGCTGCACTCAACATGCT
rJMFF001L12+          GGTCCATGATGCTGGACACATGGTTCCCATGGACCAGCCGAAAGCTGCACTCAACATGCT
rJMFF050N02+                                    CCATGGACCAGCCGAAAGCTGCACTCAACATGCT
                      ____________________________________________________________
consensus             GGTCCATGATGCTGGACACATGGTTCCCATGGACCAGCCGAAAGCTGCACTCAACATGCT
 
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rJMFF044D18+          GGAGAGGTGGACTGCAGGTTCGCTTTCTGGGAGAATGGCTGAGCCTCAAAATTTGATCTC
rJMFF018B03+          GGAGAGGTGGACTGCAGGTTCGCTTTCTGGGAGAATGGCTGAGCCTCAAAATTTGATCTC
rJMFF001L12+          GGAGAGGTGGACTGCAGGTTCGCTTTCTGGGAGAATGGCTGAGCCTCAAAATTTGATCTC
rJMFF050N02+          GGAGAGGTGGACTGCAGGTTCGCTTTCTGGGAGAATGGCTGAGCCTCAAAATTTGATCTC
                      ____________________________________________________________
consensus             GGAGAGGTGGACTGCAGGTTCGCTTTCTGGGAGAATGGCTGAGCCTCAAAATTTGATCTC
 
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rJMFF044D18+          TTCAATGTAATCTGTAAAGAGTTTCTTGAATTTCATGAATAGAGTGTAGATGTCAAATAA
rJMFF018B03+          TTCAATGTAATCTGTAAAGAGTTTCTTGAATTTCATGAATAGAGTGTAGATGTCAAATAA
rJMFF001L12+          TTCAATGTAATCTGTAAAGAGTTTCTTGAATTTCATGAATAGAGTGTAGATGTCAAATAA
rJMFF050N02+          TTCAATGTAATCTGTAAAGAGTTTCTTGAATTTCATGAATAGAGTGTAGATGTCAAATAA
                      ____________________________________________________________
consensus             TTCAATGTAATCTGTAAAGAGTTTCTTGAATTTCATGAATAGAGTGTAGATGTCAAATAA
 
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rJMFF044D18+          AT                                                          
rJMFF018B03+          ATAATCTTAAGCTGTCGTGTTTAATATTGAAACGAACTGCACCTAGGTCCTCTGATCAAC
rJMFF001L12+          ATAATCTTAAGCTGTCGTGTTTAATATTGAAACGAACTGCACCTAGGTCCTCTGATCAAC
rJMFF050N02+          ATAATCTTAAGCTGTCGTGTTTAATATTGAAACGAACTGCACCTAGGTCCTCTGATCAAC
                      ____________________________________________________________
consensus             ATAATCTTAAGCTGTCGTGTTTAATATTGAAACGAACTGCACCTAGGTCCTCTGATCAAC
 
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rJMFF018B03+          AGACTACAGACTACTGATTGGCTCCAACTATAATTACAATCGTTATACCCTGCACCACGG
rJMFF001L12+          AGACTACAGACTACTGATTGGCTCCAACTATAATTACAATCGTTATACCCTGCACCACGG
rJMFF050N02+          AGACTACAGACTACTGATTGGCTCCAACTATAATTACAATCGTTATACCCTGCACCACGG
                      ____________________________________________________________
consensus             AGACTACAGACTACTGATTGGCTCCAACTATAATTACAATCGTTATACCCTGCACCACGG
 
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rJMFF018B03+          CGCGCGCAGCACTGTGCGTCTCGTGCCTCTCAAAACGACGTCGTTT              
rJMFF001L12+          CGCGCGCAGCACTGTGCGTCTCGTGCCTCTCAAAACGACGTCGTTTTGAGAGGTGCGGAA
rJMFF050N02+          CGCGCGCAGCACTGTGCGTCTCGTGCCTCTCAAAACGACGTCGTTTTGAGAGGTGCGGAA
                      ____________________________________________________________
consensus             CGCGCGCAGCACTGTGCGTCTCGTGCCTCTCAAAACGACGTCGTTTTGAGAGGTGCGGAA
 
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rJMFF001L12+          GGTGATTGATGTGATTATTTGTATTTATCTATATCGTTATATGTATTTGTTTATACAATT
rJMFF050N02+          GGTGATTGATGTGATTATTTGTATTTATCTATATCGTTATATGTATTTGTTTATACAATT
                      ____________________________________________________________
consensus             GGTGATTGATGTGATTATTTGTATTTATCTATATCGTTATATGTATTTGTTTATACAATT
 
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rJMFF001L12+          ATG                                                         
rJMFF050N02+          ATGTGTATTTTTTATAGGGAAAATGACACTTTTTCCCCCTAAGTTAAAAAAAAAAAAAAG
                      ____________________________________________________________
consensus             ATGTGTATTTTTTATAGGGAAAATGACACTTTTTCCCCCTAAGTTAAAAAAAAAAAAAAG