Contig 002730:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021H19Sequence528002730 (18)ref|XP_009771097.1|2e-61PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy683002730 (18)ref|XP_011078736.1|2e-100PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Sesamum indi
JMFF046N21Sequence538002730 (18)ref|XP_009771097.1|4e-56PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy239002730 (18)
JMFF049P08Sequence640002730 (18)ref|XP_009771097.1|6e-79PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy442002730 (18)ref|XP_009417101.1|2e-21PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Musa acumina
JMSF001O23Sequence184002730 (18)393002730 (18)ref|XP_010256162.1|4e-45PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nelumbo nuci
JMSF016L19Sequence433002730 (18)ref|XP_010256162.1|8e-29PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nelumbo nuci750002730 (18)ref|XP_009610024.1|2e-113PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana to
JMSF037A04Sequence606002730 (18)ref|XP_009771097.1|5e-72PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy688002730 (18)ref|XP_011078736.1|1e-109PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Sesamum indi
JMSF040I13Sequence634002730 (18)ref|XP_009771097.1|6e-75PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy350002730 (18)ref|XP_010256162.1|4e-11PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nelumbo nuci
JMSF042M14Sequence697002730 (18)ref|XP_009771097.1|1e-97PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy722002730 (18)ref|XP_011078736.1|2e-109PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Sesamum indi
JMSF052O16Sequence695002730 (18)ref|XP_009771097.1|7e-96PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy834002730 (18)ref|XP_009771097.1|4e-140PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nicotiana sy

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037A04- AT
JMSF016L19- AGATCGAATCCTAT
JMSF040I13- CAGATCGAATCCTAT
JMSF052O16- AT
                      ____________________________________________________________
consensus CAGATCGAATCCTAT
 
. : . : . : . : . : . :
JMSF037A04- AGTAGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
JMFF046N21- AGTAGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
JMFF021H19- ACCTCTCATCTCCGCCATAGCCATGGCCA
JMSF016L19- AGTAGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
JMSF001O23- AGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
JMSF040I13- AGTAGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
JMFF049P08- AGTAGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
JMSF052O16- AGTAGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
JMSF042M14- AGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
                      ____________________________________________________________
consensus AGTAGAGGAGTGGAGACTCCAGTCCACTCTCACCTCTCATCTCCGCCATAGCCATGGCCA
 
. : . : . : . : . : . :
JMSF037A04- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMFF046N21- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMFF021H19- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMSF016L19- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMSF001O23- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMSF040I13- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMFF049P08- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMSF052O16- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
JMSF042M14- CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
                      ____________________________________________________________
consensus CCTTATCCTTCATCTCTTCCTCCTCTCTCCTCCATGGCAATGCCTCCTCCGCCGCCGGAA
 
. : . : . : . : . : . :
JMSF037A04- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMFF046N21- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMFF021H19- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMSF016L19- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMSF001O23- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMSF040I13- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMFF049P08- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMSF052O16- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
JMSF042M14- CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
                      ____________________________________________________________
consensus CCACCCTACGCACACCTTCCCTTATGCCGCCGCGCCAGCGCAGCAACCCCTCCTCTCTCA
 
. : . : . : . : . : . :
JMSF037A04- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
JMFF046N21- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
JMFF021H19- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
JMSF016L19- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
JMSF001O23- GCGTGCGGCGCA
JMSF040I13- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
JMFF049P08- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
JMSF052O16- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
JMSF042M14- GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
rJMSF052O16+ TAA
                      ____________________________________________________________
consensus GCGTGCGGCGCACCCCCACTTTCAGAGCCTTCTCCGCCCCCTCCCCTCCCCCTGCCTTAA
 
. : . : . : . : . : . :
JMSF037A04- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
JMFF046N21- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
JMFF021H19- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
JMSF016L19- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
JMSF040I13- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
JMFF049P08- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
JMSF052O16- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
JMSF042M14- CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
rJMSF052O16+ CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
                      ____________________________________________________________
consensus CGCAGGACGACCTCAAGAAGCTCGCTGCCGACAAGGCGGTGGACTATGTGAAGAGCGGGA
 
. : . : . : . : . : . :
JMSF037A04- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
JMFF046N21- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
JMFF021H19- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
JMSF016L19- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
JMSF040I13- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
JMFF049P08- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
JMSF052O16- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
JMSF042M14- TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
rJMSF052O16+ TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
rJMSF016L19+ TCGGCGAGC
                      ____________________________________________________________
consensus TGGTCCTCGGCCTCGGGACTGGCTCCACCGCCGCCTTCGTGGTGGCCAAGCTCGGCGAGC
 
. : . : . : . : . : . :
JMSF037A04- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
JMFF046N21- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
JMFF021H19- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
JMSF016L19- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCA
JMSF040I13- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
JMFF049P08- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
JMSF052O16- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
JMSF042M14- TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
rJMSF052O16+ TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
rJMSF042M14+ CTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
rJMSF037A04+ CTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
rJMFF021H19+ ACTCAGG
rJMSF016L19+ TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
                      ____________________________________________________________
consensus TCATTTCCTCCGGCCAACTCACGGACATCGTCGGCGTGCCGACCTCCAAGCGCACTCAGG
 
. : . : . : . : . : . :
JMSF037A04- AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
JMFF046N21- AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
JMFF021H19- AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
JMSF040I13- AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
JMFF049P08- AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
JMSF052O16- AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
JMSF042M14- AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
rJMSF052O16+ AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
rJMSF042M14+ AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
rJMSF037A04+ AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
rJMFF021H19+ AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
rJMSF016L19+ AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
                      ____________________________________________________________
consensus AGCAGGCCGCCTCCCTCAACATCCCGCTCTCCACGCTCGATGATCACCCGAAGCTTGACC
 
. : . : . : . : . : . :
JMSF037A04- TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
JMFF046N21- TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGG
JMFF021H19- TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
JMSF040I13- TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
JMFF049P08- TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
JMSF052O16- TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
JMSF042M14- TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
rJMSF052O16+ TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
rJMSF042M14+ TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
rJMSF037A04+ TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
rJMFF021H19+ TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
rJMSF016L19+ TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
                      ____________________________________________________________
consensus TAGCAATCGACGGCGCCGACGAGGTCGATCCGAATCTGGACCTGGTCAAGGGCCGCGGCG
 
. : . : . : . : . : . :
JMSF037A04- GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
JMFF021H19- GCGCTCTCCTCCGCGAGAA
JMSF040I13- GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
JMFF049P08- GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
JMSF052O16- GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
JMSF042M14- GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
rJMSF052O16+ GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
rJMSF042M14+ GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
rJMSF037A04+ GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
rJMFF021H19+ GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
rJMSF016L19+ GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
                      ____________________________________________________________
consensus GCGCTCTCCTCCGCGAGAAAATGGTGGAGGCGGCGTCCGACAAGTTCGTGGTGGTCGTCG
 
. : . : . : . : . : . :
JMSF037A04- ACG
JMSF040I13- ACGATACGAAGCTCGTCTC
JMFF049P08- ACGATACGAAGCTCGTCTCGGNGCTTGGCGGGTCGGGTCT
JMSF052O16- ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
JMSF042M14- ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
rJMSF052O16+ ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
rJMSF042M14+ ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
rJMSF001O23+ CAATGCCCGTNGNGGTCG
rJMSF037A04+ ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
rJMFF021H19+ ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
rJMSF016L19+ ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
                      ____________________________________________________________
consensus ACGATACGAAGCTCGTCTCGGGGCTTGGCGGGTCGGGTCTCGCAATGCCCGTCGAGGTCG
 
. : . : . : . : . : . :
JMSF052O16- TCCAATTCTGCTGGAAATACAATCTGCTCCGC
JMSF042M14- TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGG
rJMSF052O16+ TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGGAGATGTTCAGAGAATTGGATT
rJMSF042M14+ TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGGAGATGTTCAGAGAATTGGATT
rJMSF001O23+ TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGGAGATGTTCAGAGAATTNNATT
rJMSF040I13+ TCCAGGAGATGTTCAGNGAATTGGATT
rJMSF037A04+ TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGGAGATGTTCAGAGAATTGGATT
rJMFF021H19+ TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGGAGATGTTCAGAGAATTGGATT
rJMSF016L19+ TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGGAGATGTTCAGAGAATTGGATT
                      ____________________________________________________________
consensus TCCAATTCTGCTGGAAATACAATCTGCTCCGCCTCCAGGAGATGTTCAGAGAATTGGATT
 
. : . : . : . : . : . :
rJMSF052O16+ GCGACGCCAAGTTGAGATTGGACGGCGGTAAGCCTTATGTGACGGATAATTCCAATTACA
rJMSF042M14+ GCGACGCCAAGTTGAGATTGGACGGCGGTAAGCCTTATGTGACGGATAATTCCAATTACA
rJMSF001O23+ GCGACGCCAAGGTNAGATTGGACGGCGGTAAGCCTTATGTGACGGATAATTCCAATTACA
rJMSF040I13+ GCGACGCCAAGTTGNGATTGGACGGCGGTAAGCCNTATGNNACGGATAATTCCAATTACA
rJMSF037A04+ GCGACGCCAAGTTGAGATTGGACGGCGGTAAGCCTTATGTGACGGATAATTCCAATTACA
rJMFF021H19+ GCGACGCCAAGTTGAGATTGGACGGCGGTAAGCCTTATGTGACGGATAATTCCAATTACA
rJMSF016L19+ GCGACGCCAAGTTGAGATTGGACGGCGGTAAGCCTTATGTGACGGATAATTCCAATTACA
rJMFF049P08+ TTATGTGACGGATAATTCCAATTACA
                      ____________________________________________________________
consensus GCGACGCCAAGTTGAGATTGGACGGCGGTAAGCCTTATGTGACGGATAATTCCAATTACA
 
. : . : . : . : . : . :
rJMSF052O16+ TTGTGGA-TTTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCGCCGGGAAGGAGATT
rJMSF042M14+ TTGTGGA-TTTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCGCCGGGAAGGAGATT
rJMSF001O23+ TTGTGGA-TCTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCGCCGGNAAGGAGATT
rJMSF040I13+ TTGTGGACTTTNTACTNTAAGACTCCCANNAAAGANTNCCGCGCCNCCGGGAAGGAGATT
rJMSF037A04+ TTGTGGA-TTTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCGCCGGGAAGGAGATT
rJMFF021H19+ TTGTGGA-TTTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCGCCGGGAAGGAGATT
rJMSF016L19+ TTGTGGA-TTTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCGCCGGGAAGGAGATT
rJMFF049P08+ TTGTGGA-TTTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCCCCGGGAAGGAGATT
                      ____________________________________________________________
consensus TTGTGGA-TTTGTACTTTAAGACTCCCATTAAAGATTCCCGCGCCGCCGGGAAGGAGATT
 
. : . : . : . : . : . :
rJMSF052O16+ TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATTGTTCTTGGATATGGCCACTGCTGTGAT
rJMSF042M14+ TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATTGTTCTTGGATATGGCCACTGCTGTGAT
rJMSF001O23+ TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATCGTTCTNGGATATGGCCACTGCTNTNAT
rJMSF040I13+ TCGGCGCNTGGAAGGTGTGGTGGAGCATGGATTNNTCTTGGATATGGCCACTGCTNTGAT
rJMSF037A04+ TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATTGTTCTTGGATATGGCCACTGCTGTGAT
rJMFF021H19+ TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATTGTTCTTGGATATGGCCACTGCTGTGAT
rJMSF016L19+ TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATTGTTCTTGGATATGGCCACTGCTGTGAT
rJMFF046N21+ GAT
rJMFF049P08+ TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATTGTTTTTGGATATGGCCACTGCTGTGAT
                      ____________________________________________________________
consensus TCGGCG-TTGGAAGGTGTGGTGGAGCATGGATTGTTCTTGGATATGGCCACTGCTGTGAT
 
. : . : . : . : . : . :
rJMSF052O16+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
rJMSF042M14+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
rJMSF001O23+ CANTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTNAAAATNGTGA-GAATCCAAG
rJMSF040I13+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAACGTGNAAATGGTGACGAATCCAAG
rJMSF037A04+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
rJMFF021H19+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
rJMSF016L19+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
rJMFF046N21+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
rJMFF049P08+ CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
                      ____________________________________________________________
consensus CATTGCTGGAAAGGAAGGAGTGAGTGTGAAGAGCAA-GTGAAAATGGTGA-GAATCCAAG
 
. : . : . : . : . : . :
rJMSF052O16+ TCATTTTAGCCTTGTTTTATAATTTTTAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
rJMSF042M14+ TCATTTTAGCCTTGTTTTATAATTTTTAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
rJMSF001O23+ TCATTTTAGCCTTGTTTTATAATTTTTAGTTTNGGAAGTTTATGTCGTAGTATANCTTTT
rJMSF040I13+ TCATTTTAGCCTTGTNTTATAATTTTTAGTTTTGGAAGTTTA
rJMSF037A04+ TCATTTTAGCCTTGTTTTATAATTTTTAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
rJMFF021H19+ TCATTTTAGCCTTGTTTTATAATTTTCAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
rJMSF016L19+ TCATTTTAGCCTTGTTTTATAATTTTTAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
rJMFF046N21+ TCATTTTAGCCTTGTTTTATAATTTTTAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
rJMFF049P08+ TCATTTTAGCCTTGTTTTATAATTTTTAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
                      ____________________________________________________________
consensus TCATTTTAGCCTTGTTTTATAATTTTTAGTTTTGGAAGTTTATGTTGTAGTATAACTTTT
 
. : . : . : . : . : . :
rJMSF052O16+ GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACATTCTCTT
rJMSF042M14+ GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACATTCTCTTTGTAT
rJMSF001O23+ GGTACATCATAGNTCAAAT
rJMSF037A04+ GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACAT
rJMFF021H19+ GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACATTCTCTTTGTAT
rJMSF016L19+ GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACATTCTCTTTGTAT
rJMFF046N21+ GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACATTTTCTTTGTAT
rJMFF049P08+ GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACATTTTCTTTGTAT
                      ____________________________________________________________
consensus GGTACATCATAGTTCAAATGGATTATTGAATTAAATGAGTTCATTACATTCTCTTTGTAT
 
. : . : . : . : . : . :
rJMSF042M14+ GAATAAAAGAAAAACAAAAAATT
rJMFF021H19+ GAATAAAAGAAAAACAAAAA
rJMSF016L19+ GAATAAAAGAAAAACAAAAAATT
rJMFF046N21+ GAATAAAAGAAAAACAAAAAATTTGGTTTATTGTGAATTGAATTATTTATTACCCCTT
rJMFF049P08+ GAATAAAAGAAAAACAAAAAATTTGGTTTATTGTGAATTGAATTATTTATTACCCCTTXX
                      ____________________________________________________________
consensus GAATAAAAGAAAAACAAAAAATTTGGTTTATTGTGAATTGAATTATTTATTACCCCTTNN
 
. : . : . : . : . : . :
rJMFF049P08+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG