| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP018A02 | Sequence | 206 | 002729 (25) | ||||||||
| JMCP020D04 | Sequence | 249 | 002729 (25) | ||||||||
| JMFF002P19 | Sequence | 502 | 000634 (24) | gb|AGK27782.1| | 3e-75 | actin 7, partial [Dendrocalamus latiflorus] | 758 | 002729 (25) | tpg|DAA51050.1| | 2e-51 | TPA: putative actin family protein [Zea mays] |
| JMFF007B15 | Sequence | 145 | 000634 (24) | 729 | 002729 (25) | dbj|BAB60900.1| | 1e-62 | actin [Ipomoea nil] | |||
| JMFF008H01 | Sequence | 154 | 000634 (24) | 711 | 002729 (25) | gb|AFP43694.1| | 9e-111 | actin 2, partial [Eriobotrya japonica] | |||
| JMFF010B09 | Sequence | 470 | 000634 (24) | gb|AGK27782.1| | 2e-73 | actin 7, partial [Dendrocalamus latiflorus] | 295 | 002729 (25) | dbj|BAB60900.1| | 2e-24 | actin [Ipomoea nil] |
| JMFF016E21 | Sequence | 507 | 000634 (24) | gb|AGK27782.1| | 2e-81 | actin 7, partial [Dendrocalamus latiflorus] | 696 | 002729 (25) | gb|AFP43694.1| | 3e-119 | actin 2, partial [Eriobotrya japonica] |
| JMFF017E06 | Sequence | 512 | 000634 (24) | gb|AGK27782.1| | 1e-85 | actin 7, partial [Dendrocalamus latiflorus] | 738 | 002729 (25) | gb|AFP43694.1| | 5e-119 | actin 2, partial [Eriobotrya japonica] |
| JMFF022O22 | Sequence | 228 | 000634 (24) | gb|AGK27782.1| | 4e-13 | actin 7, partial [Dendrocalamus latiflorus] | 760 | 002729 (25) | tpg|DAA51050.1| | 9e-53 | TPA: putative actin family protein [Zea mays] |
| JMFF025N09 | Sequence | 116 | 000634 (24) | 771 | 002729 (25) | gb|ADL59374.2| | 9e-148 | actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea] | |||
| JMFF028O24 | Sequence | 435 | 000634 (24) | gb|AGK27782.1| | 6e-66 | actin 7, partial [Dendrocalamus latiflorus] | 661 | 002729 (25) | gb|AFP43694.1| | 1e-118 | actin 2, partial [Eriobotrya japonica] |
| JMFF029A15 | Sequence | 295 | 000634 (24) | emb|CDX79746.1| | 2e-19 | BnaC03g20820D [Brassica napus] | 761 | 002729 (25) | tpg|DAA51050.1| | 9e-53 | TPA: putative actin family protein [Zea mays] |
| JMFF032O01 | Sequence | 467 | 000634 (24) | gb|AGK27782.1| | 2e-73 | actin 7, partial [Dendrocalamus latiflorus] | 669 | 002729 (25) | gb|AFP43694.1| | 7e-121 | actin 2, partial [Eriobotrya japonica] |
| JMFF033K19 | Sequence | 470 | 000634 (24) | gb|AGK27782.1| | 2e-73 | actin 7, partial [Dendrocalamus latiflorus] | 264 | 002729 (25) | gb|AEL88913.1| | 5e-18 | actin [Halodule beaudettei] |
| JMFF033M18 | Sequence | 471 | 000634 (24) | gb|AGK27782.1| | 2e-75 | actin 7, partial [Dendrocalamus latiflorus] | 772 | 002729 (25) | gb|ADE05541.1| | 2e-72 | actin [Liriodendron tulipifera] |
| JMFF039O05 | Sequence | 518 | 000634 (24) | gb|AGK27782.1| | 3e-84 | actin 7, partial [Dendrocalamus latiflorus] | 717 | 002729 (25) | gb|ADL59374.2| | 8e-133 | actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea] |
| JMFF043J04 | Sequence | 636 | 000634 (24) | gb|AGK27782.1| | 4e-117 | actin 7, partial [Dendrocalamus latiflorus] | 601 | 002729 (25) | gb|ADE05541.1| | 4e-93 | actin [Liriodendron tulipifera] |
| JMFF045D18 | Sequence | 644 | 000634 (24) | ref|XP_004156708.1| | 4e-130 | PREDICTED: actin-97-like [Cucumis sativus] | 625 | 002729 (25) | gb|ADE05541.1| | 1e-96 | actin [Liriodendron tulipifera] |
| JMFF045J16 | Sequence | 639 | 000634 (24) | gb|AGK27782.1| | 2e-119 | actin 7, partial [Dendrocalamus latiflorus] | 571 | 002729 (25) | tpg|DAA51050.1| | 4e-72 | TPA: putative actin family protein [Zea mays] |
| JMFF046E07 | Sequence | 636 | 000634 (24) | gb|ADL59374.2| | 2e-121 | actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea] | 503 | 002729 (25) | gb|AAW83504.1| | 1e-04 | actin [Ipomoea batatas] |
| JMFF049O23 | Sequence | 568 | 000634 (24) | gb|AGK27782.1| | 9e-76 | actin 7, partial [Dendrocalamus latiflorus] | 422 | 002729 (25) | |||
| JMFN031M22 | Sequence | 534 | 002729 (25) | gb|ADE05541.1| | 1e-87 | actin [Liriodendron tulipifera] | |||||
| JMSF009L18 | Sequence | 338 | 000634 (24) | gb|AAS78671.1| | 2e-33 | actin [Capsicum annuum] | 743 | 002729 (25) | gb|ADL59374.2| | 2e-149 | actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea] |
| JMSF033M14 | Sequence | 146 | 002729 (25) | ||||||||
| JMSF049I04 | Sequence | 674 | 000634 (24) | emb|CAJ42300.1| | 4e-102 | actin 1 [Plantago major] | 717 | 002729 (25) | gb|ADL59374.2| | 2e-137 | actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea] |
This contig is upended
. : . : . : . : . : . :
rJMSF009L18+ TA
____________________________________________________________
consensus TA
. : . : . : . : . : . :
rJMSF009L18+ TGAAGGGTATGCCCTCCCACATGCTATCCTTCGTCTTGATTTGGCTGGTCGTGACCTCAC
rJMFF025N09+ ATCCTTCGTCTTGATTTGGCTGGTCGTGACCTCAC
rJMFF039O05+ C
____________________________________________________________
consensus TGAAGGGTATGCCCTCCCACATGCTATCCTTCGTCTTGATTTGGCTGGTCGTGACCTCAC
. : . : . : . : . : . :
rJMSF009L18+ TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMFF025N09+ TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMSF049I04+ GATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMFF039O05+ TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMFF032O01+ TCAGCTGAACG
rJMFF028O24+ CG
rJMFF016E21+ AACG
rJMFF017E06+ ACG
____________________________________________________________
consensus TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
. : . : . : . : . : . :
rJMSF009L18+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF025N09+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMSF049I04+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF039O05+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF032O01+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF028O24+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF016E21+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF017E06+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF008H01+ AAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
____________________________________________________________
consensus GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
. : . : . : . : . : . :
rJMSF009L18+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF025N09+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMSF049I04+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF039O05+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF032O01+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF028O24+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF016E21+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF045D18+ TAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF017E06+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF043J04+ TGAACTTCCTGATGGGCA
rJMFF008H01+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCNTGATGGGCA
____________________________________________________________
consensus GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
. : . : . : . : . : . :
rJMSF009L18+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF025N09+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMSF049I04+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF039O05+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF032O01+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF028O24+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
JMFN031M22- CACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF016E21+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF045D18+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF017E06+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF043J04+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF008H01+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF033M18+ TTCATT
____________________________________________________________
consensus AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
. : . : . : . : . : . :
rJMSF009L18+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF025N09+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMSF049I04+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF039O05+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF032O01+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF028O24+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
JMFN031M22- GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF016E21+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF045D18+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF017E06+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF043J04+ GGTCGGATTGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF008H01+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF007B15+ CATACAACTCTATCATGAAGTGTGA
rJMFF045J16+ TCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF033M18+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF022O22+ GGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF029A15+ GGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF002P19+ TGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
____________________________________________________________
consensus GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
. : . : . : . : . : . :
rJMSF009L18+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF025N09+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMSF049I04+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF039O05+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF032O01+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF028O24+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
JMFN031M22- TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF016E21+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF045D18+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF017E06+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF043J04+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF008H01+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF007B15+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF045J16+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF033M18+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF022O22+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF029A15+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF002P19+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
____________________________________________________________
consensus TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
. : . : . : . : . : . :
rJMSF009L18+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF025N09+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMSF049I04+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF039O05+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF032O01+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF028O24+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
JMFN031M22- -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF016E21+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF045D18+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF017E06+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF043J04+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF008H01+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF007B15+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF045J16+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF033M18+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF022O22+ CCCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF010B09+ GA
rJMFF029A15+ CCCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF002P19+ CCCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
____________________________________________________________
consensus -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
. : . : . : . : . : . :
rJMSF009L18+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF025N09+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMSF049I04+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF039O05+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF032O01+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF028O24+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTTTCTGGATTGGAGGCTCCATAT
JMFN031M22- AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF016E21+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF045D18+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF017E06+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF043J04+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF008H01+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF007B15+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF045J16+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF033M18+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF022O22+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF010B09+ AGATTAANGTTGTAGCNCCACCTGAAAGGAAATNCAGTGTCTGGATTGGAGGCTCCATAN
rJMFF033K19+ GTCTGGATTGGAGGCTCCATAT
rJMFF029A15+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF002P19+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
____________________________________________________________
consensus AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
. : . : . : . : . : . :
rJMSF009L18+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF025N09+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMSF049I04+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF039O05+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF032O01+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF028O24+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
JMFN031M22- TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF016E21+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF045D18+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF017E06+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF043J04+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF008H01+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF007B15+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF045J16+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF033M18+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF046E07+ TGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF022O22+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF010B09+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF033K19+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMCP020D04- ATGATGAGTCCG
rJMCP018A02- ATGATGAGTCCG
rJMFF029A15+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF002P19+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
____________________________________________________________
consensus TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
. : . : . : . : . : . :
rJMSF009L18+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF025N09+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMSF049I04+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF039O05+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF032O01+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF028O24+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
JMFN031M22- GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF016E21+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF045D18+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF017E06+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF043J04+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF008H01+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF007B15+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF045J16+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF033M18+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF046E07+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF022O22+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF010B09+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF033K19+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMCP020D04- GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMCP018A02- GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
JMSF033M14- GC
rJMFF029A15+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF002P19+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF049O23+ GC
____________________________________________________________
consensus GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
. : . : . : . : . : . :
rJMSF009L18+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF025N09+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMSF049I04+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCT--TATGTTCTAGCT
rJMFF039O05+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF032O01+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF028O24+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
JMFN031M22- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF016E21+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF045D18+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF017E06+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF043J04+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF008H01+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF007B15+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF045J16+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF033M18+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF046E07+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF022O22+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF010B09+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF033K19+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMCP020D04- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMCP018A02- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
JMSF033M14- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF029A15+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF002P19+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF049O23+ ATACAAGTATTCTCTCCTACTTGGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
____________________________________________________________
consensus ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
. : . : . : . : . : . :
rJMSF009L18+ TTTATTTGTATTTGTTGTTGTC
rJMFF025N09+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTT
rJMSF049I04+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGAT
rJMFF039O05+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTA
rJMFF032O01+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTA
rJMFF028O24+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
JMFN031M22- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF016E21+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF045D18+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF017E06+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF043J04+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF008H01+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF007B15+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF045J16+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF033M18+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF046E07+ TTTATTTGTATTTGTTGTTGTCATGTGGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF022O22+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF010B09+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGA
rJMFF033K19+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMCP020D04- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMCP018A02- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
JMSF033M14- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF029A15+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF002P19+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF049O23+ TTTATTTGTATTTGTTGTTGTCATGTGGGATGTATGATTTGACAATGCAAGGAGTTATAT
____________________________________________________________
consensus TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
. : . : . : . : . : . :
JMFN031M22- T
rJMFF016E21+ TATGATGATGTTGCACAATTCTTTCCATTTTAT
rJMFF045D18+ TAAAAAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
rJMFF017E06+ TATGATGATGTTGCACAATTCTTTCTATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF043J04+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCT
rJMFF008H01+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF007B15+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF045J16+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF033M18+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF046E07+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF022O22+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF033K19+ TA
rJMCP020D04- TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGT
rJMCP018A02- TATGATGATGTT
JMSF033M14- TATGATGATGTTGCA
rJMFF029A15+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF002P19+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF049O23+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
____________________________________________________________
consensus TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
. : . : . : . : . : . :
rJMFF017E06+ GCAATGCAATGCAAGA
rJMFF008H01+ GCAATGCAATGCAAGA
rJMFF007B15+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF045J16+ GCAATGCAA
rJMFF033M18+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF046E07+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF022O22+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF029A15+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF002P19+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF049O23+ GCATTGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
____________________________________________________________
consensus GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
. : . : . : . : . : . :
rJMFF007B15+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF033M18+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF046E07+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF022O22+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF029A15+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF002P19+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF049O23+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
____________________________________________________________
consensus CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
. : . : . : . : . : . :
rJMFF007B15+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF033M18+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF046E07+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF022O22+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF029A15+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF002P19+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF049O23+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
____________________________________________________________
consensus GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
. : . : . : . : . : . :
rJMFF007B15+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF033M18+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF046E07+ TGGATTGTATGATGCTAGCTGTAACCAATCATT
rJMFF022O22+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGA
rJMFF029A15+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF002P19+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF049O23+ TGGATTGTATGATGCTAGCTGTAACCAATCATTTCCTTAAAGAAGAATTATCTACCACCC
____________________________________________________________
consensus TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAATTATCTACCACCC