| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F08 | Sequence | 534 | 008772 (8) | gb|KJB09427.1| | 1e-82 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 803 | 002728 (8) | ref|XP_007200983.1| | 8e-126 | hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti |
| JMFF017E16 | Sequence | 613 | 008772 (8) | gb|KJB09427.1| | 3e-101 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 791 | 002728 (8) | ref|XP_007200983.1| | 7e-110 | hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti |
| JMFF018I04 | Sequence | 628 | 008772 (8) | gb|KJB09427.1| | 2e-118 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 819 | 002728 (8) | ref|XP_002302734.1| | 9e-120 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMFF024D21 | Sequence | 490 | 008772 (8) | gb|KJB09427.1| | 2e-80 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 819 | 002728 (8) | ref|XP_002302734.1| | 3e-119 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMFF047C18 | Sequence | 382 | 008772 (8) | ref|XP_009778286.1| | 5e-52 | PREDICTED: fumarate hydratase 1, mitochondrial-like [Nicotiana sylvestris] ref| | 342 | 002728 (8) | ref|XP_004247395.1| | 9e-08 | PREDICTED: fumarate hydratase 1, mitochondrial [Solanum lycopersicum] |
| JMFF049J03 | Sequence | 622 | 008772 (8) | gb|KJB09427.1| | 2e-113 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 584 | 002728 (8) | ref|XP_002302734.1| | 3e-60 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMSF016P04 | Sequence | 470 | 008772 (8) | gb|KJB09427.1| | 6e-82 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 747 | 002728 (8) | ref|XP_002302734.1| | 3e-129 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMSF027O01 | Sequence | 635 | 008772 (8) | ref|XP_009622148.1| | 3e-133 | PREDICTED: fumarate hydratase 1, mitochondrial isoform X1 [Nicotiana tomentosif | 770 | 002728 (8) | ref|XP_007200983.1| | 2e-68 | hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti |
This contig is upended
. : . : . : . : . : . :
rJMFF017E16+ AAGCA
rJMFF004F08+ GAAANCAAGTTTGAAGCA
rJMSF016P04+ TGTTACAGCTGAAAACAAGTTTGAAGCA
____________________________________________________________
consensus TGTTACAGCTGAAAACAAGTTTGAAGCA
. : . : . : . : . : . :
rJMFF017E16+ TTGGCTGCACATGATGCGTTTGTTGAAAGCAGCGGAGCCTTAAATACAATTTGCTGCTTC
rJMFF004F08+ TTGGCTGCACATGATGCGTTTGTTGAAAGCAGCGGAGCCTTAAATACAA-TTGCTGCTTC
rJMSF016P04+ CTGGCTGCACATGATGCATTTGTTGAAAGCAGTGGGGCCTTAAATACAA-TTGCTGCTTC
rJMFF024D21+ GCACATGATGCATTTGTTGAAAGCAGTGGGNCCTTAAATACAA-TTGCTGCTTC
rJMFF018I04+ GCACATGATGCATTTGTTGAAAGCAGTGGGNCCTTAAATACAA-TTGCTGCTTC
____________________________________________________________
consensus TTGGCTGCACATGATGCATTTGTTGAAAGCAGTGGGGCCTTAAATACAA-TTGCTGCTTC
. : . : . : . : . : . :
rJMFF017E16+ TCTCATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGTTGTGGTCTTGG
rJMFF004F08+ TCTCATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGTTGTGGTCTTGG
rJMSF016P04+ TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
rJMFF024D21+ TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
rJMFF018I04+ TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
____________________________________________________________
consensus TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
. : . : . : . : . : . :
rJMFF017E16+ TGAACTCATTCTTCCAGAAAATGAACCTGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
rJMFF004F08+ TGAACTCATTCTTCCAGAAAATGAACCTGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
rJMSF016P04+ TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
rJMFF024D21+ TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGATGAACCC
rJMFF018I04+ TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
____________________________________________________________
consensus TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
. : . : . : . : . : . :
rJMFF017E16+ TACGCAGTGTGAGGCTCTCACAATGGTCTGTGCTCAGGTTTTTGGAAATCATGTGGGACT
rJMFF004F08+ TACGCAGTGTGAGGCTCTCACAATGGTCTGTGCTCAGGTTTTTGGAAATCATGTGGGACT
rJMSF027O01+ TCAGGTTTTTGGAAATCATGTGGGACT
rJMSF016P04+ TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTATTGGAAATCATGTGGGCCT
rJMFF024D21+ TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTATTGGAAATCATGTGGGCCT
rJMFF018I04+ TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTATTGGAAATCATGTGGGCCT
____________________________________________________________
consensus TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTTTTGGAAATCATGTGGGCCT
. : . : . : . : . : . :
rJMFF017E16+ CACAGTGGGTGGATCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF004F08+ CACAGTGGGTGGATCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMSF027O01+ CACAGTGGGTGGATCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMSF016P04+ CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF024D21+ CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF018I04+ CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF049J03+ AATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
____________________________________________________________
consensus CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
. : . : . : . : . : . :
rJMFF017E16+ TTCTCTCCTACATTCCGTAAGATTGCTTGGAGATGCGTCAGCTTCTTTTGAAAAGAATTG
rJMFF004F08+ TTCTCTCCTACATTCCGTAAGATTGCTTGGAGATGCGTCAGCTTCTTTTGAAAAGAATTG
rJMSF027O01+ TTCTCTCCTACATTCCGTAAGATTGCTTGGAGATGCGTCAGCTTCTTTTGAAAAGAATTG
rJMSF016P04+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
rJMFF024D21+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
rJMFF018I04+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
rJMFF049J03+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
____________________________________________________________
consensus TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
. : . : . : . : . : . :
rJMFF017E16+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF004F08+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMSF027O01+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMSF016P04+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF024D21+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF018I04+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF049J03+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
____________________________________________________________
consensus CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
. : . : . : . : . : . :
rJMFF017E16+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGATAACGCTGCAGCAGTAGCCAAAAA
rJMFF004F08+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGATAACGCTGCAGCAGTAGCCAAAAA
rJMSF027O01+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGATAACGCTGCAGCAGTAGCCAAAAA
rJMSF016P04+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
rJMFF024D21+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
rJMFF018I04+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
rJMFF049J03+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
____________________________________________________________
consensus GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
. : . : . : . : . : . :
rJMFF017E16+ GGCACACAAGGAAGGAACTAGTCTAAAGGAAGCTGCTTGCAATTTAAGAGTGCTGACTGC
rJMFF004F08+ GGCACACAAGGAAGGAACTAGTCTAAAGGAAGCTGCTTGCAATTTAAGAGTGCTGACTGC
rJMSF027O01+ GGCACACAAGGAAGGAACTAGTCTAAAGGAAGCTGCTTGCAATTTAAGAGTGCTGACTGC
rJMSF016P04+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF024D21+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF018I04+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF047C18+ TAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF049J03+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
____________________________________________________________
consensus GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
. : . : . : . : . : . :
rJMFF017E16+ GGAAGAGTTTGATCAACTTGTAGTTCCCGAAAAAATGATTGGACCGACTGA
rJMFF004F08+ GGAAGAGTTTGATCAACTTGTAGTTCCCGAAAAAATGATTGGACCGACTGA
rJMSF027O01+ GGAAGAGTTTGATCAACTTGTAGTTCCCGAAAAAATGATTGGACCGACTGA
rJMSF016P04+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF024D21+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF018I04+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF047C18+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF049J03+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
____________________________________________________________
consensus AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
. : . : . : . : . : . :
rJMSF016P04+ TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF024D21+ TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF018I04+ TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF047C18+ TCGATAGCATAGGGAGAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF049J03+ TCGATAGCATAGGGAGAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
____________________________________________________________
consensus TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
. : . : . : . : . : . :
rJMSF016P04+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGAGGACAATTTACCTCTT
rJMFF024D21+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
rJMFF018I04+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGAGGACAATTTACCTCTT
rJMFF047C18+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
rJMFF049J03+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
____________________________________________________________
consensus CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
. : . : . : . : . : . :
rJMFF024D21+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
rJMFF018I04+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
rJMFF047C18+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
rJMFF049J03+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
____________________________________________________________
consensus GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
. : . : . : . : . : . :
rJMFF024D21+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTA
rJMFF018I04+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTA
rJMFF047C18+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTATGAAGGAATGAGATTTTTCATCT
rJMFF049J03+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTATGAAGGAATGAGATTTTTCATCT
____________________________________________________________
consensus AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTATGAAGGAATGAGATTTTTCATCT