Contig 002728:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004F08Sequence534008772 (8)gb|KJB09427.1|1e-82hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth803002728 (8)ref|XP_007200983.1|8e-126hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti
JMFF017E16Sequence613008772 (8)gb|KJB09427.1|3e-101hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth791002728 (8)ref|XP_007200983.1|7e-110hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti
JMFF018I04Sequence628008772 (8)gb|KJB09427.1|2e-118hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth819002728 (8)ref|XP_002302734.1|9e-120Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMFF024D21Sequence490008772 (8)gb|KJB09427.1|2e-80hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth819002728 (8)ref|XP_002302734.1|3e-119Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMFF047C18Sequence382008772 (8)ref|XP_009778286.1|5e-52PREDICTED: fumarate hydratase 1, mitochondrial-like [Nicotiana sylvestris] ref|342002728 (8)ref|XP_004247395.1|9e-08PREDICTED: fumarate hydratase 1, mitochondrial [Solanum lycopersicum]
JMFF049J03Sequence622008772 (8)gb|KJB09427.1|2e-113hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth584002728 (8)ref|XP_002302734.1|3e-60Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMSF016P04Sequence470008772 (8)gb|KJB09427.1|6e-82hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth747002728 (8)ref|XP_002302734.1|3e-129Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMSF027O01Sequence635008772 (8)ref|XP_009622148.1|3e-133PREDICTED: fumarate hydratase 1, mitochondrial isoform X1 [Nicotiana tomentosif770002728 (8)ref|XP_007200983.1|2e-68hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF017E16+ AAGCA
rJMFF004F08+ GAAANCAAGTTTGAAGCA
rJMSF016P04+ TGTTACAGCTGAAAACAAGTTTGAAGCA
                      ____________________________________________________________
consensus TGTTACAGCTGAAAACAAGTTTGAAGCA
 
. : . : . : . : . : . :
rJMFF017E16+ TTGGCTGCACATGATGCGTTTGTTGAAAGCAGCGGAGCCTTAAATACAATTTGCTGCTTC
rJMFF004F08+ TTGGCTGCACATGATGCGTTTGTTGAAAGCAGCGGAGCCTTAAATACAA-TTGCTGCTTC
rJMSF016P04+ CTGGCTGCACATGATGCATTTGTTGAAAGCAGTGGGGCCTTAAATACAA-TTGCTGCTTC
rJMFF024D21+ GCACATGATGCATTTGTTGAAAGCAGTGGGNCCTTAAATACAA-TTGCTGCTTC
rJMFF018I04+ GCACATGATGCATTTGTTGAAAGCAGTGGGNCCTTAAATACAA-TTGCTGCTTC
                      ____________________________________________________________
consensus TTGGCTGCACATGATGCATTTGTTGAAAGCAGTGGGGCCTTAAATACAA-TTGCTGCTTC
 
. : . : . : . : . : . :
rJMFF017E16+ TCTCATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGTTGTGGTCTTGG
rJMFF004F08+ TCTCATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGTTGTGGTCTTGG
rJMSF016P04+ TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
rJMFF024D21+ TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
rJMFF018I04+ TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
                      ____________________________________________________________
consensus TTTAATGAAGATTGCAAATGATATACGTTTCCTTGGAAGTGGCCCACGCTGTGGTCTTGG
 
. : . : . : . : . : . :
rJMFF017E16+ TGAACTCATTCTTCCAGAAAATGAACCTGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
rJMFF004F08+ TGAACTCATTCTTCCAGAAAATGAACCTGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
rJMSF016P04+ TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
rJMFF024D21+ TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGATGAACCC
rJMFF018I04+ TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
                      ____________________________________________________________
consensus TGAACTAATTCTTCCAGAAAATGAACCCGGAAGCAGTATCATGCCTGGGAAGGTGAACCC
 
. : . : . : . : . : . :
rJMFF017E16+ TACGCAGTGTGAGGCTCTCACAATGGTCTGTGCTCAGGTTTTTGGAAATCATGTGGGACT
rJMFF004F08+ TACGCAGTGTGAGGCTCTCACAATGGTCTGTGCTCAGGTTTTTGGAAATCATGTGGGACT
rJMSF027O01+ TCAGGTTTTTGGAAATCATGTGGGACT
rJMSF016P04+ TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTATTGGAAATCATGTGGGCCT
rJMFF024D21+ TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTATTGGAAATCATGTGGGCCT
rJMFF018I04+ TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTATTGGAAATCATGTGGGCCT
                      ____________________________________________________________
consensus TACACAGTGTGAGGCTATCACAATGGTCTGTGCTCAGGTTTTTGGAAATCATGTGGGCCT
 
. : . : . : . : . : . :
rJMFF017E16+ CACAGTGGGTGGATCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF004F08+ CACAGTGGGTGGATCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMSF027O01+ CACAGTGGGTGGATCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMSF016P04+ CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF024D21+ CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF018I04+ CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
rJMFF049J03+ AATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
                      ____________________________________________________________
consensus CACAGTGGGTGGGTCTAATGGCCATTTTGAGCTGAATGTATTCAAGCCTATGATTGCCAA
 
. : . : . : . : . : . :
rJMFF017E16+ TTCTCTCCTACATTCCGTAAGATTGCTTGGAGATGCGTCAGCTTCTTTTGAAAAGAATTG
rJMFF004F08+ TTCTCTCCTACATTCCGTAAGATTGCTTGGAGATGCGTCAGCTTCTTTTGAAAAGAATTG
rJMSF027O01+ TTCTCTCCTACATTCCGTAAGATTGCTTGGAGATGCGTCAGCTTCTTTTGAAAAGAATTG
rJMSF016P04+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
rJMFF024D21+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
rJMFF018I04+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
rJMFF049J03+ TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
                      ____________________________________________________________
consensus TTCTCTCCTTCATTCCGTAAGATTGCTTGGAGATGCATCAGCCTCTTTCGAAAAGAATTG
 
. : . : . : . : . : . :
rJMFF017E16+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF004F08+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMSF027O01+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMSF016P04+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF024D21+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF018I04+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
rJMFF049J03+ CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
                      ____________________________________________________________
consensus CGTAAGGGGAATTCAGGCCAATAGGGAAAGGATTTCTAAACTACTACACGAGTCACTCAT
 
. : . : . : . : . : . :
rJMFF017E16+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGATAACGCTGCAGCAGTAGCCAAAAA
rJMFF004F08+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGATAACGCTGCAGCAGTAGCCAAAAA
rJMSF027O01+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGATAACGCTGCAGCAGTAGCCAAAAA
rJMSF016P04+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
rJMFF024D21+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
rJMFF018I04+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
rJMFF049J03+ GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
                      ____________________________________________________________
consensus GCTTGTCACATGTTTGAACCCGAAAATTGGTTATGACAATGCTGCAGCAGTCGCCAAAAA
 
. : . : . : . : . : . :
rJMFF017E16+ GGCACACAAGGAAGGAACTAGTCTAAAGGAAGCTGCTTGCAATTTAAGAGTGCTGACTGC
rJMFF004F08+ GGCACACAAGGAAGGAACTAGTCTAAAGGAAGCTGCTTGCAATTTAAGAGTGCTGACTGC
rJMSF027O01+ GGCACACAAGGAAGGAACTAGTCTAAAGGAAGCTGCTTGCAATTTAAGAGTGCTGACTGC
rJMSF016P04+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF024D21+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF018I04+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF047C18+ TAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
rJMFF049J03+ GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
                      ____________________________________________________________
consensus GGCACACAAGGAAGGAACTAGCCTAAAGGAAGCTGCTTGCAATTTACAAGTGCTCACCGC
 
. : . : . : . : . : . :
rJMFF017E16+ GGAAGAGTTTGATCAACTTGTAGTTCCCGAAAAAATGATTGGACCGACTGA
rJMFF004F08+ GGAAGAGTTTGATCAACTTGTAGTTCCCGAAAAAATGATTGGACCGACTGA
rJMSF027O01+ GGAAGAGTTTGATCAACTTGTAGTTCCCGAAAAAATGATTGGACCGACTGA
rJMSF016P04+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF024D21+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF018I04+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF047C18+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
rJMFF049J03+ AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
                      ____________________________________________________________
consensus AGAAGAGTTTGATCAACTCGTAGTTCCCGAAAAAATGATTGGACCGACTGACTAATCTCC
 
. : . : . : . : . : . :
rJMSF016P04+ TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF024D21+ TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF018I04+ TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF047C18+ TCGATAGCATAGGGAGAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
rJMFF049J03+ TCGATAGCATAGGGAGAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
                      ____________________________________________________________
consensus TCGATAGCATAGGGAAAATCGGATCCATTTTTAGTTAGCTGCTACTGCATTCTTTTTCTT
 
. : . : . : . : . : . :
rJMSF016P04+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGAGGACAATTTACCTCTT
rJMFF024D21+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
rJMFF018I04+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGAGGACAATTTACCTCTT
rJMFF047C18+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
rJMFF049J03+ CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
                      ____________________________________________________________
consensus CCATTGATCAATCTGATGAATTATATAGGAAAATAAAGGTCAGGGGACAATTTACCTCTT
 
. : . : . : . : . : . :
rJMFF024D21+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
rJMFF018I04+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
rJMFF047C18+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
rJMFF049J03+ GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
                      ____________________________________________________________
consensus GGTTTCTGTAACGTAGAAATATATGTGAGGAAATAATTAATTCCCATTTTGGAGGTGTTG
 
. : . : . : . : . : . :
rJMFF024D21+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTA
rJMFF018I04+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTA
rJMFF047C18+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTATGAAGGAATGAGATTTTTCATCT
rJMFF049J03+ AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTATGAAGGAATGAGATTTTTCATCT
                      ____________________________________________________________
consensus AGGCTTTGGAGAAATTTGCAGCTTCTTCATTTTATTATGAAGGAATGAGATTTTTCATCT