Contig 002727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P10Sequence389002727 (4)gb|KCW88708.1|2e-34hypothetical protein EUGRSUZ_A01063 [Eucalyptus grandis]
JMFF024L02Sequence367002727 (4)
JMFF041A13Sequence516000277 (3)ref|XP_008342227.1|5e-26PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica]310002727 (4)gb|KCW46857.1|2e-14hypothetical protein EUGRSUZ_K00661 [Eucalyptus grandis]
JMFF049I09Sequence484000277 (3)ref|XP_008342227.1|9e-25PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica]558002727 (4)gb|KCW46857.1|7e-19hypothetical protein EUGRSUZ_K00661 [Eucalyptus grandis]

Alignment

This contig is upended


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rJMFF013P10+                            GTGNCGATGGACAACGTCAGCAACCCAATCTTGATCGATCAG
                      ____________________________________________________________
consensus                               GTGNCGATGGACAACGTCAGCAACCCAATCTTGATCGATCAG
 
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rJMFF013P10+          CAATACTGTCCCTGGAATCAATGCAAGACCGGCGTTCCGTCGAAAATAAAGATCAGTGAC
                      ____________________________________________________________
consensus             CAATACTGTCCCTGGAATCAATGCAAGACCGGCGTTCCGTCGAAAATAAAGATCAGTGAC
 
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rJMFF013P10+          GTTAGCTTCAAGGAGATAAAGNGGACGTCGGCGACAAAGGTGGCAGTGAAATTACTGTGC
rJMFF041A13+                         ATAACGGGGACGTCGGCGACAAAGGTGGCGGTGAAATTACTGTGC
rJMFF049I09+                TTCAAGGAGATAACGGGGACGTCGGCGACAAAGGTGGCGGTGAAATTACTGTGC
                      ____________________________________________________________
consensus             GTTAGCTTCAAGGAGATAACGGGGACGTCGGCGACAAAGGTGGCGGTGAAATTACTGTGC
 
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rJMFF013P10+          AGCTCCGGAGTACCGTGCAACAAAGTAGTGCTGAGCGGGGTGAAGTTGGAATACAAAGGA
rJMFF041A13+          AGCTCCGGAGTACCGTGCAACAAAGTAGTGTTGAGCGGGGTGAAGTTGGAATACAAAGGA
rJMFF024L02+                                         TGAGCGGGGNGAAGTTGGAATNCAAAGGN
rJMFF049I09+          AGCTCCGGAGTACCGTGCAACAAAGTAGTGTTGAGCGGGGTGAAGTTGGAATACAAAGGA
                      ____________________________________________________________
consensus             AGCTCCGGAGTACCGTGCAACAAAGTAGTGTTGAGCGGGGTGAAGTTGGAATACAAAGGA
 
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rJMFF013P10+          ACCAACGGCAGCGCCATATCGGAATGTGATAACTTGAAGCCAACACTCTCCGGCAAAAAT
rJMFF041A13+          ACCAACGGCAGCGCCATATCGGAATGTGACAACGTGAAGCCCACCCTTTCCGGCAAAAAT
rJMFF024L02+          ACCAACGGCAGCCCCATTTTGGAATNNGACAACGNGAAGCCAACNCTTTNCGGCAAAAAT
rJMFF049I09+          ACCAACGGCAGCGCCATATCGGAATGTGACAACGTGAAGCCAACACTCTCCGGCAAAAAT
                      ____________________________________________________________
consensus             ACCAACGGCAGCGCCATATCGGAATGTGACAACGTGAAGCCAACACTTTCCGGCAAAAAT
 
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rJMFF013P10+          TCCCCTGCAATTTGTGATGCCTCTAAAAAAGGTGCCCCTGAAGGTGCCCCTGCCCCAGGT
rJMFF041A13+          TCCCCTGCAATTTGTGATGCCTCCAAAGGAGGCCCCCCTGAGGGTGCCCCTGCCCCAGGT
rJMFF024L02+          TCCCCTGCAATTTNNGATGCCCCCAAAGGNGGNGCCCCTGAAGGNGCCCCTGCCCCAGGN
rJMFF049I09+          TCCCCTGCAATTTGTGATGCCTCCAAAGGAGGCGCCCCTGAGGGTGCCCCTGCCCCAGGT
                      ____________________________________________________________
consensus             TCCCCTGCAATTTGTGATGCCTCCAAAGGAGGCGCCCCTGAGGGTGCCCCTGCCCCAGGT
 
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rJMFF013P10+          GCCCCTGCCCCTGCCCCTAAAAAAGATGCCCCTGCCCCTAAAAAAG              
rJMFF041A13+          GCCCCTACCCCTGCCCCTAAAAAAAATGCCCCTGCCCCTAAAAAAGCTTAGCTTAATC  
rJMFF024L02+          GCCCCTGCCCCTGCCCCTAAAAAAGATGCCTTTGCCCCTAAAAAAGNTTAGNTTAATCNC
rJMFF049I09+          GCCCCTGCCCCTGCCCCTAAAAAAGATGCCCCTGCCCCTAAAAAAGCTTAGCTTTATCAC
                      ____________________________________________________________
consensus             GCCCCTGCCCCTGCCCCTAAAAAAGATGCCCCTGCCCCTAAAAAAGCTTAGCTTAATCAC
 
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rJMFF024L02+          TNTGNGT-NTCCCGTTTTTAATTAGAATTAGACTTAATTACGNGTTTTTAAATAAATAGN
rJMFF049I09+          TCTGTGTAATCCCGTCTCTAATTAGAATTAGACTTAATTACGTGTTTGTAAATAAATAGC
                      ____________________________________________________________
consensus             TCTGTGTAATCCCGTTTTTAATTAGAATTAGACTTAATTACGTGTTTTTAAATAAATAGC
 
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rJMFF024L02+          TTAGATNANACCAAGGGCCTTNTNTTCCAATGGTNTCNCGTTGTTCCCCTNTNTGGGAAG
rJMFF049I09+          TTAGATCAGACCAAGTACCTTGTAGTCCAATGGTATCACGTTGCTCCCCTATATGGGAAG
                      ____________________________________________________________
consensus             TTAGATCAGACCAAGTGCCTTGTATTCCAATGGTATCACGTTGTTCCCCTATATGGGAAG
 
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rJMFF024L02+          NGATAGGTTCAATAACTTANATCA                                    
rJMFF049I09+          TGATAGGTTCAATAACTTAGATCAGTGTGCACTGCACCAGATCAGGAAAGGTGAAATTCT
                      ____________________________________________________________
consensus             TGATAGGTTCAATAACTTAGATCAGTGTGCACTGCACCAGATCAGGAAAGGTGAAATTCT
 
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rJMFF049I09+          TTTTTTTTAGTAGTAGTACAATATATCTTTTCTAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TTTTTTTTAGTAGTAGTACAATATATCTTTTCTAAAAAAAAAAAAAAAACTCTCCAGGGT