clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF013I02 | Sequence | 661 | 002726 (7) | ref|XP_006380397.1| | 3e-50 | hypothetical protein POPTR_0007s04710g [Populus trichocarpa] gb|ERP58194.1| hypo | |||||
JMFF020O19 | Sequence | 540 | 005999 (7) | ref|XP_011099674.1| | 2e-63 | PREDICTED: amino acid permease 2-like [Sesamum indicum] ref|XP_011099676.1| PRED | 730 | 002726 (7) | emb|CAH59425.1| | 4e-100 | amino acid permease [Plantago major] |
JMFF029J15 | Sequence | 484 | 005999 (7) | ref|XP_010652912.1| | 4e-52 | PREDICTED: amino acid permease 3 isoform X1 [Vitis vinifera] | 783 | 002726 (7) | ref|XP_003634405.1| | 2e-82 | PREDICTED: amino acid permease 3 [Vitis vinifera] |
JMFF049H23 | Sequence | 645 | 005999 (7) | ref|XP_006464914.1| | 1e-89 | PREDICTED: amino acid permease 2-like [Citrus sinensis] | 511 | 002726 (7) | emb|CAH59425.1| | 3e-42 | amino acid permease [Plantago major] |
JMFS142G05 | Sequence | 626 | 002726 (7) | ref|XP_010025744.1| | 3e-122 | PREDICTED: amino acid permease 4-like [Eucalyptus grandis] ref|XP_010025745.1| P | |||||
JMSF032O23 | Sequence | 694 | 005999 (7) | ref|XP_006464914.1| | 3e-100 | PREDICTED: amino acid permease 2-like [Citrus sinensis] | 606 | 002726 (7) | emb|CAH59425.1| | 5e-82 | amino acid permease [Plantago major] |
JMSF039E17 | Sequence | 655 | 005999 (7) | ref|XP_011099674.1| | 6e-93 | PREDICTED: amino acid permease 2-like [Sesamum indicum] ref|XP_011099676.1| PRED | 847 | 002726 (7) | gb|KJB33339.1| | 8e-82 | hypothetical protein B456_006G007300 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
JMFS142G05- TACATGATTGCTTTTGGAATTATAGAAATTATTCTATCTCAAATCCCGGAT
____________________________________________________________
consensus TACATGATTGCTTTTGGAATTATAGAAATTATTCTATCTCAAATCCCGGAT
. : . : . : . : . : . :
JMFS142G05- TTTGATCAAATATGGTGGCTCTCAATAGTTGCTGCTGTTATGTCCTTTACCTACTCTGGA
____________________________________________________________
consensus TTTGATCAAATATGGTGGCTCTCAATAGTTGCTGCTGTTATGTCCTTTACCTACTCTGGA
. : . : . : . : . : . :
JMFS142G05- ATTGGATTGGGGCTTGGAATTGCACAAGTTGTTGCTAACGGGGCTTTCAAGGGCAGCCTC
____________________________________________________________
consensus ATTGGATTGGGGCTTGGAATTGCACAAGTTGTTGCTAACGGGGCTTTCAAGGGCAGCCTC
. : . : . : . : . : . :
JMFS142G05- ACTGGCATTAGCATTGGAACTGTTACTGAAACCCAAAAAATATGGAGGAGTTTTCAAGCT
____________________________________________________________
consensus ACTGGCATTAGCATTGGAACTGTTACTGAAACCCAAAAAATATGGAGGAGTTTTCAAGCT
. : . : . : . : . : . :
JMFS142G05- CTTGGAGACATTGCTTTTGCCTATTCATATTCCATCATTCTTATTGAAATTCAGGACACG
rJMSF039E17+ TTCAGGACACG
____________________________________________________________
consensus CTTGGAGACATTGCTTTTGCCTATTCATATTCCATCATTCTTATTGAAATTCAGGACACG
. : . : . : . : . : . :
JMFS142G05- GTGAAATCTCCGCCGTCAGAATCAAAGACGATGAGGAAAGCTAGCCTGTTCAGCACTATA
rJMFF029J15+ CGTCAGAATCAAAGACGATGAGGAAAGCTAGCCTGTTCAGCACTATA
rJMFF020O19+ TGTTCAGCACTATA
rJMSF039E17+ GTGAAATCTCCGCCGTCAGAATCAAAGACGATGAGGAAAGCTAGCCTGTTCAGCACTATA
____________________________________________________________
consensus GTGAAATCTCCGCCGTCAGAATCAAAGACGATGAGGAAAGCTAGCCTGTTCAGCACTATA
. : . : . : . : . : . :
JMFS142G05- GTGACTACAACTTTCTACATGCTATGCGGGTGCATGGGTTACGCAGCATTCGGGGATGAT
rJMFF029J15+ GTGACTACAACTTTCTACATGCTATGCGGGTGCATGGGTTACGCAGCATTCGGGGATGAT
rJMFF020O19+ GTGACTACAACTTTNTACATGCTATGCGGGTGCATGGGTTACGCAGCATTCGGGGATGAT
rJMSF039E17+ GTGACTACAACTTTCTACATGCTATGCGGGTGCATGGGTTACGCAGCATTCGGGGATGAT
____________________________________________________________
consensus GTGACTACAACTTTCTACATGCTATGCGGGTGCATGGGTTACGCAGCATTCGGGGATGAT
. : . : . : . : . : . :
JMFS142G05- GCGCCCGGGAATCTCTTAACCGGGTTCGGGTTCTACAACCC-TTTTTGGCTCCTGGATAT
rJMFF029J15+ GCGCCCGGGAATCTCTTAACCGGGTTCGGGTTCTACAACCC-TTTTTGGCTCCTGGATAT
rJMSF032O23+ GTTCGGGTTCTACAACCC-TTTTTGGCTCCTGGATAT
rJMFF020O19+ GCGCCCGGGAATCTCTTAACCGGGTTCGGGTTCTACAACCC-TTTTTGGCTCCTGGATAT
rJMFF013I02+ CCTGGATAT
rJMSF039E17+ GCGCCCGGGAATCTCTTAACCGGGTTCGGGTTCTACAACCCTTTTTTGGCTCCTGGATAT
____________________________________________________________
consensus GCGCCCGGGAATCTCTTAACCGGGTTCGGGTTCTACAACCC-TTTTTGGCTCCTGGATAT
. : . : . : . : . : . :
JMFS142G05- CGCCAACGCCGCCATCGTCATCCACCTTGTGGGAGCCTACCAAGTGTACTGCCAGCCGCT
rJMFF029J15+ CGCCAACGCCGCCATCGTCATCCACCTTGTGGGAGCCTACCAAGTGTACTGCCAGCCGCT
rJMSF032O23+ CGCCAACGCCGCCATCGTCATCCACCTTGTGGGAGCCTACCAAGTGTACTGCCAGCCGCT
rJMFF020O19+ CGCCAACGCCGCCATCGTCATCCACCTTGTGGGAGCCTACCAAGTGTACTGCCAGCCGCT
rJMFF013I02+ CGCCAACGCCGCCATCGTCATCCACNTTGTGGGAGCCTACCAAGTGTACTGCCAGCCGCT
rJMSF039E17+ CGCCAACGCCGCCATCGTCATCCACCTTGTGGGAGCCTACCAAGTGTACTGCCAGCCGCT
____________________________________________________________
consensus CGCCAACGCCGCCATCGTCATCCACCTTGTGGGAGCCTACCAAGTGTACTGCCAGCCGCT
. : . : . : . : . : . :
JMFS142G05- GTTTGCATTCATCGAGAAATGGGTCGGGGCGAAATGGCCCGACAGCGAGAT-CATCACCA
rJMFF029J15+ GTTTGCATTCATCGAGAAATGGGTCGGGGCGAAATGGCCCGACAGCGAGATCCATCACCA
rJMSF032O23+ GTTTGCATTCATCGAGAAATGGGTCGGGGCGAAATGGCCCGACGGCGAGAT-CATCACCA
rJMFF020O19+ GTTTGCATTCATCGAGAAATGGGTCGGGGCGAAATGGCCCGACAGCGAGAT-CATCACCA
rJMFF013I02+ GTTTGCATTCATCGAGAAATGGGTCGGGGCGAAATGGCCCGACAGCGAGATCCATCACCA
rJMSF039E17+ GTTTGCATTCATCGAGAAATGGGTCGGGGCGAAATGGCCCGACAGCGAGAT-CATCACCA
____________________________________________________________
consensus GTTTGCATTCATCGAGAAATGGGTCGGGGCGAAATGGCCCGACAGCGAGAT-CATCACCA
. : . : . : . : . : . :
JMFS142G05- AGGAAATCAACCTGAAAATCCCCGGGTTCGGGTACCC
rJMFF029J15+ AGGAAATCAACCTGAAAATCCCCGGGTTCGGGTACCCGTATAAACTGAATACTTTCCGGT
rJMSF032O23+ AGGAAATCAACCTGAAAATCCCCGGGTTCGGGTACCCGTATAAACTGAATACTTTCCGGT
rJMFF020O19+ AGGAAATCAACCTGAAAATCCCCGGGTTCGGGTACCCGTATAAACTGAATACTTTCCGGT
rJMFF013I02+ AGGAAATCAACCTGAAAATCCCCGGGTTCGGGTACCCGTATAAACTGAATACTTTCCGGT
rJMSF039E17+ AGGAAATCAACCTGAAAATCCCCGGGTTCGGGTACCCGTATAAACTGAATACTTTCCGGT
rJMFF049H23+ CGGGTACCCGTATAAACTGAATACTTTCCGGT
____________________________________________________________
consensus AGGAAATCAACCTGAAAATCCCCGGGTTCGGGTACCCGTATAAACTGAATACTTTCCGGT
. : . : . : . : . : . :
rJMFF029J15+ TGCTGTGGCGCACGGCGTTCGTGCTCTTAACCACCGTCATATCCATGTTGCTGCCTTTCT
rJMSF032O23+ TGCTGTGGCGCACGGCGTTCGTGCTCTTAACCACCGTCATATCCATGTTGCTGCCTTTCT
rJMFF020O19+ TGCTGTGGCGCACGGCGTTCGTGCTCTTAACCACCGTCATATCCATGTTGCTGCCTTTCT
rJMFF013I02+ TGCTGTGGCGCACGGCGTTCGTGCTCTTAACCACCGTCATATCCATGTTGCTGCCTTTCT
rJMSF039E17+ TGCTGTGGCGCACGGCGTTCGTGCTCTTAACCACCGTCATATCCATGTTGCTGCCTTTCT
rJMFF049H23+ TGCTGTGGCGCACGGCGTTCGTGCTCTTAACCACCGTCATATCCATGTTGCTGCCTTTCT
____________________________________________________________
consensus TGCTGTGGCGCACGGCGTTCGTGCTCTTAACCACCGTCATATCCATGTTGCTGCCTTTCT
. : . : . : . : . : . :
rJMFF029J15+ TCAACGACGTCGTTGGGATTCTCGGGGCGTTCGGGTTCTGGCCGTTGACCGTGTATTTTC
rJMSF032O23+ TCAACGACGTCGTTGGGATTCTCGGGGCGTTCGGGTTCTGGCCGTTGACCGTGTATTTTC
rJMFF020O19+ TCAACGACGTCGTTGGGATTCTCGGGGCGTTCGGGTTCTGGCCGTTGACCGTGTATTTTC
rJMFF013I02+ TCAACGACGTCGTTGGGATTCTCGGGGCGTTCGGGTTCTGGCCGTTGACCGTGTATTTTC
rJMSF039E17+ TCAACGACGTCGTTGGGATTCTCGGGGCGTTCGGGTTCTGGCCGTTGACCGTGTATTTTC
rJMFF049H23+ TCAACGACGTCGTTGGGATTCTCGGGGCGTTCGGGTTCTGGCCGTTGACCGTGTATTTTC
____________________________________________________________
consensus TCAACGACGTCGTTGGGATTCTCGGGGCGTTCGGGTTCTGGCCGTTGACCGTGTATTTTC
. : . : . : . : . : . :
rJMFF029J15+ CGGTAAGGATGTACATTTCACAGAAG-AAAATACCCAAGTGGAGCACCCGGTGGATTTGC
rJMSF032O23+ CGGTAAGGATGTACATTTCACAGAAG-AAAATACCCAAGTGGAGCACCCGGTGGATTTGC
rJMFF020O19+ CGGTAAGGATGTACATTTCACAGAAG-AAAATACCCAAGTGGAGCACCCGGTGGATTTGC
rJMFF013I02+ CGGTAAGGATGTACATTTCACAGAAGAAAAATACCCAAGTGGAGCACCCGGTGGATTTGC
rJMSF039E17+ CGGTAAGGATGTACATTTCACAGAAG-AAAATACCCAAGTGGAGCACCCGGTGGATTTGC
rJMFF049H23+ CGGTAAGGATGTACATTTCACAGAAG-GAAATACCCAAGTGGAGCACCCGGTGGATTTGC
____________________________________________________________
consensus CGGTAAGGATGTACATTTCACAGAAG-AAAATACCCAAGTGGAGCACCCGGTGGATTTGC
. : . : . : . : . : . :
rJMFF029J15+ CTCCAAATGCTGAGCGGCGCTTGCTTGGCGGTGTCGCTCGCGGCGGCCGCCGGTTCGTTC
rJMSF032O23+ CTCCAAATGCTGAGCGGCGCTTGCTTGGCGGTGTCGCTCGCGGCGGCCGCCGGTTCGTTC
rJMFF020O19+ CTCCAAATGCTGAGCGGCGCTTGCTTGGCGGTGTCGCTCGCGGCGGCCGCCGGTTCGTTC
rJMFF013I02+ CTCCAAATGCTGAGCGGCGCTTGCTTGGCGGTGTCGCTCGCGGCGGCCGCCGGTTCGTTC
rJMSF039E17+ CTCCAAATGCTGAGCGGCGCTTGCTTGGCGGTGTCGCTCGCGGCGGCCGCCGGTTCGTTC
rJMFF049H23+ CTCCAAATGCTGAGCGGCGCTTGCTTGGCGGTGTCGCTCGCGGCGGCCGCCGGTTCGTTC
____________________________________________________________
consensus CTCCAAATGCTGAGCGGCGCTTGCTTGGCGGTGTCGCTCGCGGCGGCCGCCGGTTCGTTC
. : . : . : . : . : . :
rJMFF029J15+ GCCGGTGTGGTTCTTGATCTTAAGCTTTACAGACCATTCAAGACTAGCTACTAAAGTGAA
rJMSF032O23+ GCCGGTGTGGTTCTTGATCTTAAGCTTTACAGACCATTCAAGACTAGCTACTAAAGTGAA
rJMFF020O19+ GCCGGTGTGGTTCTTGATCTTAAGCTTTACAGACCATTCAAGACTAGCTACTAAAGTGAA
rJMFF013I02+ GCCGGTGTGGTTCTTGATCTTAAGCTTTACAGACCATTCAAGACTAGCTACTAAAGTGAA
rJMSF039E17+ GCCGGTGTGGTTCTTGATCTTAAGCTTTACAGACCATTCAAGACTAGCTACTAAAGTGAA
rJMFF049H23+ GCCGGTGTGGTTCTTGATCTTAAGCTTTACAGACCATTCAAGACTAGCTACTAAAGTGAA
____________________________________________________________
consensus GCCGGTGTGGTTCTTGATCTTAAGCTTTACAGACCATTCAAGACTAGCTACTAAAGTGAA
. : . : . : . : . : . :
rJMFF029J15+ GTATTTAGTCATTGCGCGCCATGCATTATATTGCATGAACAAGCTAAGGATCATGTTCAT
rJMSF032O23+ GTATTTAGTCATTGCGCGCCATGCATTATATTGCATGAACAAGCTAAGGATCATGTTCAT
rJMFF020O19+ GTATTTAGTCATTGCGCGCCATGCATTATATTGCATGAACAAGCTAAGGATCATGTTCAT
rJMFF013I02+ GTATTTAGTCATTGCGCGCCATGCATTATATTGCATGAACAAGCTAAGGATCATGTTCAT
rJMSF039E17+ GTATTTAGTCATTGCGCGCCATGCATTATATTGCATGAACAAGCTAAGGATCATGTTCAT
rJMFF049H23+ GTATTTAGTCATTGCGCGCCATGCATTATATTGCATGAACAAGCTAAGGATCATGTTCAT
____________________________________________________________
consensus GTATTTAGTCATTGCGCGCCATGCATTATATTGCATGAACAAGCTAAGGATCATGTTCAT
. : . : . : . : . : . :
rJMFF029J15+ GTATGTAATTAATTCCAATAACAAAATTAAAGCATGTAATGGGGGCTAAAGTGTCAATTT
rJMSF032O23+ GTATGTAATTAATTCCAATAACAAAATTAAAG
rJMFF020O19+ GTATGTAATTAATTCCAATAACAAAATTAAAGCATGTAATGGGGGCTAAAGTGTCAATT
rJMFF013I02+ GTATGTAATTAATTCCAATAACAAAATTAAAGCATGTAATGGGGGCTAAAGTGTCAATTT
rJMSF039E17+ GTATGTAATTAATTCCAATAACAAAATTAAAGCATGTAATGGGGGCTAAAGTGTCAATTT
rJMFF049H23+ GTATGTAATTAATTCCAATAACAAAATTAAAGCATGTAATGGGGGCTAAAGTGTCAATTT
____________________________________________________________
consensus GTATGTAATTAATTCCAATAACAAAATTAAAGCATGTAATGGGGGCTAAAGTGTCAATTT
. : . : . : . : . : . :
rJMFF029J15+ ATGAAGTT
rJMFF013I02+ ATGAAGTTTGAGCAGCCCATTTAATAAATAAAAAAGTCTCGTGTCAT
rJMSF039E17+ ATGAAGTTTGAGCAGCCCATTTAATAAATAAAAAAGTCTCGTGTCAT
rJMFF049H23+ ATGAAGTTTGAGCAGCCCATTTAATAAATAAAAAAGTCTCGTGTCATTACTCATGTATTG
____________________________________________________________
consensus ATGAAGTTTGAGCAGCCCATTTAATAAATAAAAAAGTCTCGTGTCATTACTCATGTATTG