Contig 002721:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049B07Sequence634005287 (5)ref|XP_009769784.1|4e-62PREDICTED: exocyst complex component EXO84B [Nicotiana sylvestris]388002721 (3)
JMFF049D07Sequence627005287 (5)gb|EYU21227.1|1e-60hypothetical protein MIMGU_mgv1a001664mg [Erythranthe guttata]411002721 (3)
JMSF024I20Sequence684005287 (5)ref|XP_009622289.1|9e-70PREDICTED: exocyst complex component EXO84B [Nicotiana tomentosiformis]748002721 (3)ref|XP_006342868.1|256PREDICTED: uncharacterized protein LOC102578846 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF024I20+                                                   TATGTAAAACTCAACAGAA
                      ____________________________________________________________
consensus                                                      TATGTAAAACTCAACAGAA
 
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rJMSF024I20+          TTGCAGCCATAGCCGCAGATATGTTCGTGGGCCGGGAAAGATTTGCAACATTGTTGTTGA
                      ____________________________________________________________
consensus             TTGCAGCCATAGCCGCAGATATGTTCGTGGGCCGGGAAAGATTTGCAACATTGTTGTTGA
 
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rJMSF024I20+          TGAGGCTCACTGAAACTGTCATCTTATGGCTTTCACAAGACCAGAGTTTTTGGGATGATA
                      ____________________________________________________________
consensus             TGAGGCTCACTGAAACTGTCATCTTATGGCTTTCACAAGACCAGAGTTTTTGGGATGATA
 
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rJMSF024I20+          TTGAGGAAGGACCGAGGCCTTTAGGTCCTCTTGGTCTTCAGCAGTTGTATATGGATATGA
                      ____________________________________________________________
consensus             TTGAGGAAGGACCGAGGCCTTTAGGTCCTCTTGGTCTTCAGCAGTTGTATATGGATATGA
 
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rJMSF024I20+          CATTTGTCAGATGCTTTGCTTCACAAGGCCGCTACTTATCTAGGAATTTGCTCCGTGTTG
                      ____________________________________________________________
consensus             CATTTGTCAGATGCTTTGCTTCACAAGGCCGCTACTTATCTAGGAATTTGCTCCGTGTTG
 
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rJMSF024I20+          TCAATGATATCATATCTAAAGCAATGTCTGCATTTTCTGCAACTGGGATGGATCCATACA
                      ____________________________________________________________
consensus             TCAATGATATCATATCTAAAGCAATGTCTGCATTTTCTGCAACTGGGATGGATCCATACA
 
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rJMSF024I20+          GTGAGCTTCCAGAGGACGAGTGGTTCAGCGAGGTGTGCCAGGATGCAATGGATAAGCTGA
                      ____________________________________________________________
consensus             GTGAGCTTCCAGAGGACGAGTGGTTCAGCGAGGTGTGCCAGGATGCAATGGATAAGCTGA
 
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rJMSF024I20+          GTGGAAAGCCTAAAGCTGCAAACGGGGAACGAGATTTGAACAGCCCGACTGCTTCTGTCT
rJMFF049D07+                   CTAAAGCTGCAAACGGGGAACGAGATTTGAACAGCCCGACTGCTTCTGTCT
                      ____________________________________________________________
consensus             GTGGAAAGCCTAAAGCTGCAAACGGGGAACGAGATTTGAACAGCCCGACTGCTTCTGTCT
 
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rJMSF024I20+          CAGCTCAATCAGTATCTTCTGTTAGATCCCNCGGGAGTTATTGAGGATATATAATAATAA
rJMFF049D07+          CAGCTCAATCAGTATCTTCTGTTAGATCCCACGGGAGTTATTGAGGATATATAATAATAA
rJMFF049B07+                                          GGGAGTTATTGAGGATATATAATAATAA
                      ____________________________________________________________
consensus             CAGCTCAATCAGTATCTTCTGTTAGATCCCACGGGAGTTATTGAGGATATATAATAATAA
 
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rJMSF024I20+          TAATGGTTACNCCGTTGTAAAGTATATGCGGACCTCATTTTCATCACCTTTAGATTAACC
rJMFF049D07+          TAATGGTTACCCCGTTGTAAAGTATATGCGGACCTCATTTTCATCCCCTTTAGATTAACC
rJMFF049B07+          TAATGGTTACACCGTTGTAAAGTATATGCGGACCTCATTTTCATCCCCTTTAGATTAACC
                      ____________________________________________________________
consensus             TAATGGTTACCCCGTTGTAAAGTATATGCGGACCTCATTTTCATCCCCTTTAGATTAACC
 
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rJMSF024I20+          ATTTCTTGTCTCCATAATAGAGAACTCATACCTTCTCCTCAGCTTTCTATTCTTTTTCTT
rJMFF049D07+          ATTTCTTGTCTCCATAATAGAGAACTCATACCTTCTCCTCAGCTTTCTATTCTTTTTCTC
rJMFF049B07+          ATTTCTTGTCTCCATAATAGAGAACTCATACCTTCTCCTCAGCTTTCTATTCTTTTTCTC
                      ____________________________________________________________
consensus             ATTTCTTGTCTCCATAATAGAGAACTCATACCTTCTCCTCAGCTTTCTATTCTTTTTCTC
 
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rJMSF024I20+          ACTTTTTTTTCCGTTAAAAGTGAGAGGCATTCAAGAATTTTAAATTTTTTTTTTCTTTCT
rJMFF049D07+          ACTTTTTTTTCCGTTAAAAGTGAGAGGCATTCAAGAATTTTAAATTTTTTTTTTCTTTCT
rJMFF049B07+          ACTTTTTTTTCCGTTAAAAGTGAGAGGCATTCAAGAATTTTAAATTTTTTTTTTCTTTCT
                      ____________________________________________________________
consensus             ACTTTTTTTTCCGTTAAAAGTGAGAGGCATTCAAGAATTTTAAATTTTTTTTTTCTTTCT
 
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rJMSF024I20+          AAGAAAATGTGTTCTAGTATTTGGGGGCATTTTGAATTGGAAAAAAATTATTTGTAGATT
rJMFF049D07+          AAGAAAATGTGTTCTAGTATTTGGGGGCATTTTGAATTGGAAAAAAATTATTTGTAGATT
rJMFF049B07+          AAGAAAATGTGTTCTAGTATTTGGGGGCATTTTGAATTGGAAAAAAATTATTTGTAGATT
                      ____________________________________________________________
consensus             AAGAAAATGTGTTCTAGTATTTGGGGGCATTTTGAATTGGAAAAAAATTATTTGTAGATT
 
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rJMSF024I20+          T                                                           
rJMFF049D07+          TAGTACTTAAGTGTAATGAGATTAAGGATGTGTTTCATATATTAAATACTCCCTCCGGCT
rJMFF049B07+          TAGTACTTAAGTGTAATGAGATTAAGGATGTGTTTCATATATTAAATACTCCCTCCGGCT
                      ____________________________________________________________
consensus             TAGTACTTAAGTGTAATGAGATTAAGGATGTGTTTCATATATTAAATACTCCCTCCGGCT
 
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rJMFF049B07+          CTGCCTCXXXXXXXXXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             CTGCCTCNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAACTCTCCAGGGT