Contig 002720:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C03Sequence466003290 (2)ref|XP_011092390.1|1e-09PREDICTED: G-box-binding factor 4-like [Sesamum indicum]749002720 (4)ref|XP_009615514.1|1e-60PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Nicotiana tomentosiformi
JMFF021O12Sequence660002720 (4)ref|XP_009615514.1|2e-54PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Nicotiana tomentosiformi
JMFF049A09Sequence441003290 (2)gb|EYU18526.1|2e-07hypothetical protein MIMGU_mgv1a013542mg [Erythranthe guttata]425002720 (4)ref|XP_011087814.1|5e-10PREDICTED: G-box-binding factor 4-like [Sesamum indicum]
JMSF021M05Sequence610002357 (2)ref|XP_002318354.1|3e-48hypothetical protein POPTR_0012s01020g [Populus trichocarpa] gb|EEE96574.1| hypo342002720 (4)ref|XP_011087814.1|5e-10PREDICTED: G-box-binding factor 4-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF012C03+ CTGGATTTAAAGTGGATGCCATGGTGAATGCGGCGAATTGTCAGTTTCCAGTC
                      ____________________________________________________________
consensus CTGGATTTAAAGTGGATGCCATGGTGAATGCGGCGAATTGTCAGTTTCCAGTC
 
. : . : . : . : . : . :
rJMFF012C03+ GCCATGCAGACTGGACCGGGTGGATTTGGTGTGGAGCCGCCTCACATGGGGTTCGGGAAT
rJMFF021O12+ CCTCACATGGGGTTCGGGAAT
                      ____________________________________________________________
consensus GCCATGCAGACTGGACCGGGTGGATTTGGTGTGGAGCCGCCTCACATGGGGTTCGGGAAT
 
. : . : . : . : . : . :
rJMFF012C03+ GGCGTGGTGGCTATAGGATGTAACAGCGGCAGCAGCGGTGGCGGCAGAGGGAAGAGGAGG
rJMFF021O12+ GGCGTGGTGGCTATAGGATGTAACAGCGGCAGCAGCGGTGGCGGCAGAGGGAAGAGGAGG
                      ____________________________________________________________
consensus GGCGTGGTGGCTATAGGATGTAACAGCGGCAGCAGCGGTGGCGGCAGAGGGAAGAGGAGG
 
. : . : . : . : . : . :
rJMFF012C03+ GCAACCGTGGAGGAGATGCCCCTCGATAAGGCCACGCAGCAGAAGCAGAGGCGAATGATC
rJMFF021O12+ GCAACCGTGGAGGAGATGCCCCTCGATAAGGCCACGCAGCAGAAGCAGAGGCGAATGATC
                      ____________________________________________________________
consensus GCAACCGTGGAGGAGATGCCCCTCGATAAGGCCACGCAGCAGAAGCAGAGGCGAATGATC
 
. : . : . : . : . : . :
rJMFF012C03+ AAGAACAGAGAGTCTGCGGCTAGGTCCAGGGAACGAAAACAGGCTTACACTGTGGAGCTG
rJMFF021O12+ AAGAACAGAGAGTCTGCGGCTAGGTCCAGGGAACGAAAACAGGCTTACACTGTGGAGCTG
                      ____________________________________________________________
consensus AAGAACAGAGAGTCTGCGGCTAGGTCCAGGGAACGAAAACAGGCTTACACTGTGGAGCTG
 
. : . : . : . : . : . :
rJMSF021M05+ TGAGNGAAGAGGCGGNG
rJMFF012C03+ GAGTCTCTGGTAACACAATTGGAGGAGGATAATGCTAGGCTTCTGAGAGAAGAGGCGGAG
rJMFF021O12+ GAGTCTCTGGTAACACAATTGGAGGAGGATAATGCTAGGCTTCTGAGAGAAGAGGCGGAG
                      ____________________________________________________________
consensus GAGTCTCTGGTAACACAATTGGAGGAGGATAATGCTAGGCTTCTGAGAGAAGAGGCGGAG
 
. : . : . : . : . : . :
rJMSF021M05+ CNGAATAAGAAGAGACNTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
rJMFF012C03+ CAGAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
rJMFF021O12+ CAGAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
rJMFF049A09+ GAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
                      ____________________________________________________________
consensus CAGAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
 
. : . : . : . : . : . :
rJMSF021M05+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGNCCNGGTAAGTTGTATCATCNTAT
rJMFF012C03+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
rJMFF021O12+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
rJMFF049A09+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
                      ____________________________________________________________
consensus AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
 
. : . : . : . : . : . :
rJMSF021M05+ CATAAACAGTAACAGCGGGTGACNGGTTAACCAAGAAGCAATATCGGNTATGGCAAAATC
rJMFF012C03+ CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
rJMFF021O12+ CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
rJMFF049A09+ CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
                      ____________________________________________________________
consensus CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
 
. : . : . : . : . : . :
rJMSF021M05+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTNAGACTTGAACATGAGTAGGG
rJMFF012C03+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
rJMFF021O12+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
rJMFF049A09+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
                      ____________________________________________________________
consensus TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
 
. : . : . : . : . : . :
rJMSF021M05+ CTATNAACAATGTGAATCAAATGTGTAATTNTGGGTN-TGCATAAGTTANCNGCAGGTNT
rJMFF012C03+ CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTC-TGCATAAGTTAGCTGCAGGTGT
rJMFF021O12+ CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTC-TGCATAAGTTAGCTGCAGGTGT
rJMFF049A09+ CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTCTTGCATAAGTTAGCTGCAGGTGT
                      ____________________________________________________________
consensus CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTC-TGCATAAGTTAGCTGCAGGTGT
 
. : . : . : . : . : . :
rJMSF021M05+ AATAGAATAGGGCCATAAGTTTCTGC
rJMFF012C03+ AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
rJMFF021O12+ AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
rJMFF049A09+ AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
                      ____________________________________________________________
consensus AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
 
. : . : . : . : . : . :
rJMFF012C03+ GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACAT
rJMFF021O12+ GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACAT
rJMFF049A09+ GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACATTTAATGAATATGTATTTTAGAGT
                      ____________________________________________________________
consensus GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACATTTAATGAATATGTATTTTAGAGT