| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012C03 | Sequence | 466 | 003290 (2) | ref|XP_011092390.1| | 1e-09 | PREDICTED: G-box-binding factor 4-like [Sesamum indicum] | 749 | 002720 (4) | ref|XP_009615514.1| | 1e-60 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Nicotiana tomentosiformi |
| JMFF021O12 | Sequence | 660 | 002720 (4) | ref|XP_009615514.1| | 2e-54 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Nicotiana tomentosiformi | |||||
| JMFF049A09 | Sequence | 441 | 003290 (2) | gb|EYU18526.1| | 2e-07 | hypothetical protein MIMGU_mgv1a013542mg [Erythranthe guttata] | 425 | 002720 (4) | ref|XP_011087814.1| | 5e-10 | PREDICTED: G-box-binding factor 4-like [Sesamum indicum] |
| JMSF021M05 | Sequence | 610 | 002357 (2) | ref|XP_002318354.1| | 3e-48 | hypothetical protein POPTR_0012s01020g [Populus trichocarpa] gb|EEE96574.1| hypo | 342 | 002720 (4) | ref|XP_011087814.1| | 5e-10 | PREDICTED: G-box-binding factor 4-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF012C03+ CTGGATTTAAAGTGGATGCCATGGTGAATGCGGCGAATTGTCAGTTTCCAGTC
____________________________________________________________
consensus CTGGATTTAAAGTGGATGCCATGGTGAATGCGGCGAATTGTCAGTTTCCAGTC
. : . : . : . : . : . :
rJMFF012C03+ GCCATGCAGACTGGACCGGGTGGATTTGGTGTGGAGCCGCCTCACATGGGGTTCGGGAAT
rJMFF021O12+ CCTCACATGGGGTTCGGGAAT
____________________________________________________________
consensus GCCATGCAGACTGGACCGGGTGGATTTGGTGTGGAGCCGCCTCACATGGGGTTCGGGAAT
. : . : . : . : . : . :
rJMFF012C03+ GGCGTGGTGGCTATAGGATGTAACAGCGGCAGCAGCGGTGGCGGCAGAGGGAAGAGGAGG
rJMFF021O12+ GGCGTGGTGGCTATAGGATGTAACAGCGGCAGCAGCGGTGGCGGCAGAGGGAAGAGGAGG
____________________________________________________________
consensus GGCGTGGTGGCTATAGGATGTAACAGCGGCAGCAGCGGTGGCGGCAGAGGGAAGAGGAGG
. : . : . : . : . : . :
rJMFF012C03+ GCAACCGTGGAGGAGATGCCCCTCGATAAGGCCACGCAGCAGAAGCAGAGGCGAATGATC
rJMFF021O12+ GCAACCGTGGAGGAGATGCCCCTCGATAAGGCCACGCAGCAGAAGCAGAGGCGAATGATC
____________________________________________________________
consensus GCAACCGTGGAGGAGATGCCCCTCGATAAGGCCACGCAGCAGAAGCAGAGGCGAATGATC
. : . : . : . : . : . :
rJMFF012C03+ AAGAACAGAGAGTCTGCGGCTAGGTCCAGGGAACGAAAACAGGCTTACACTGTGGAGCTG
rJMFF021O12+ AAGAACAGAGAGTCTGCGGCTAGGTCCAGGGAACGAAAACAGGCTTACACTGTGGAGCTG
____________________________________________________________
consensus AAGAACAGAGAGTCTGCGGCTAGGTCCAGGGAACGAAAACAGGCTTACACTGTGGAGCTG
. : . : . : . : . : . :
rJMSF021M05+ TGAGNGAAGAGGCGGNG
rJMFF012C03+ GAGTCTCTGGTAACACAATTGGAGGAGGATAATGCTAGGCTTCTGAGAGAAGAGGCGGAG
rJMFF021O12+ GAGTCTCTGGTAACACAATTGGAGGAGGATAATGCTAGGCTTCTGAGAGAAGAGGCGGAG
____________________________________________________________
consensus GAGTCTCTGGTAACACAATTGGAGGAGGATAATGCTAGGCTTCTGAGAGAAGAGGCGGAG
. : . : . : . : . : . :
rJMSF021M05+ CNGAATAAGAAGAGACNTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
rJMFF012C03+ CAGAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
rJMFF021O12+ CAGAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
rJMFF049A09+ GAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
____________________________________________________________
consensus CAGAATAAGAAGAGACTTAAGCAGCTCATGGAGAATCTGATTCCTGTCGTGGAGAAGAGG
. : . : . : . : . : . :
rJMSF021M05+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGNCCNGGTAAGTTGTATCATCNTAT
rJMFF012C03+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
rJMFF021O12+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
rJMFF049A09+ AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
____________________________________________________________
consensus AGGCCACCAAGAGTTCTGCGCAGAATCCATTCCATGACCTGGTAAGTTGTATCATCATAT
. : . : . : . : . : . :
rJMSF021M05+ CATAAACAGTAACAGCGGGTGACNGGTTAACCAAGAAGCAATATCGGNTATGGCAAAATC
rJMFF012C03+ CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
rJMFF021O12+ CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
rJMFF049A09+ CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
____________________________________________________________
consensus CATAAACAGTAACAGCGGGTGACTGGTTAACCAAGAAGCAATATCGGCTATGGCAAAATC
. : . : . : . : . : . :
rJMSF021M05+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTNAGACTTGAACATGAGTAGGG
rJMFF012C03+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
rJMFF021O12+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
rJMFF049A09+ TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
____________________________________________________________
consensus TGGGGGCGACATATATGGTTGGAGCTGTAATGGATGTTTTAGACTTGAACATGAGTAGGG
. : . : . : . : . : . :
rJMSF021M05+ CTATNAACAATGTGAATCAAATGTGTAATTNTGGGTN-TGCATAAGTTANCNGCAGGTNT
rJMFF012C03+ CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTC-TGCATAAGTTAGCTGCAGGTGT
rJMFF021O12+ CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTC-TGCATAAGTTAGCTGCAGGTGT
rJMFF049A09+ CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTCTTGCATAAGTTAGCTGCAGGTGT
____________________________________________________________
consensus CTATAAACAATGTGAATCAAATGTGTAATTGTGGGTC-TGCATAAGTTAGCTGCAGGTGT
. : . : . : . : . : . :
rJMSF021M05+ AATAGAATAGGGCCATAAGTTTCTGC
rJMFF012C03+ AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
rJMFF021O12+ AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
rJMFF049A09+ AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
____________________________________________________________
consensus AATAGAATAGGGCCATAAGTTTCTGCTTATATTAACTATTGTAGCTTCCGCACCATTGGT
. : . : . : . : . : . :
rJMFF012C03+ GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACAT
rJMFF021O12+ GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACAT
rJMFF049A09+ GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACATTTAATGAATATGTATTTTAGAGT
____________________________________________________________
consensus GGCAGGGAAGAATGGTGAACTTGGCTGGTTTATACATTTAATGAATATGTATTTTAGAGT