| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002D05 | Sequence | 460 | 003789 (8) | 691 | 002718 (7) | ref|XP_009776738.1| | 2e-50 | PREDICTED: mucin-5AC-like [Nicotiana sylvestris] | |||
| JMFF016C07 | Sequence | 506 | 003789 (8) | 723 | 002718 (7) | ref|XP_009776738.1| | 3e-50 | PREDICTED: mucin-5AC-like [Nicotiana sylvestris] | |||
| JMFF048J08 | Sequence | 432 | 003789 (8) | 328 | 002718 (7) | ||||||
| JMFF051I02 | Sequence | 591 | 003789 (8) | ref|XP_004239930.1| | 86.7 | PREDICTED: uncharacterized protein DDB_G0274915 [Solanum lycopersicum] | 518 | 002718 (7) | ref|XP_009776738.1| | 7e-31 | PREDICTED: mucin-5AC-like [Nicotiana sylvestris] |
| JMSF020E06 | Sequence | 666 | 003789 (8) | ref|XP_009603333.1| | 1e-25 | PREDICTED: uncharacterized serine-rich protein C215.13-like isoform X3 [Nicotia | 738 | 002718 (7) | ref|XP_009776738.1| | 2e-67 | PREDICTED: mucin-5AC-like [Nicotiana sylvestris] |
| JMSF036N03 | Sequence | 580 | 003789 (8) | ref|XP_009603333.1| | 2e-10 | PREDICTED: uncharacterized serine-rich protein C215.13-like isoform X3 [Nicotia | 100 | 002718 (7) | |||
| JMSF042E19 | Sequence | 753 | 003789 (8) | ref|XP_009603333.1| | 2e-47 | PREDICTED: uncharacterized serine-rich protein C215.13-like isoform X3 [Nicotia | 715 | 002718 (7) | ref|XP_009776738.1| | 8e-64 | PREDICTED: mucin-5AC-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF042E19+ CC
rJMFF016C07+ CC
rJMSF020E06+ CCTCCTAACGGTGTTCTTCATAACAGTGGAAGCTCTGTTCCTGTCCC
____________________________________________________________
consensus CCTCCTAACGGTGTTCTTCATAACAGTGGAAGCTCTGTTCCTGTCCC
. : . : . : . : . : . :
rJMSF042E19+ AGCTATGAGTCGGTTACATGCTAAAGCTAATGCC-AATGTGAGCCCTGTTGTGATGGGAA
rJMFF002D05+ AGCTATGAGTCGGTTACATGCTAAAGCTAATGCCAAATGTGAGCCCTGTTGTTATGGGAA
rJMFF016C07+ AGCTATGAGTCGGTTACATGCTAAAGCTAATGCCAAATGTGAGCCCTGTTGTTATGGGAA
rJMSF020E06+ AGCTATGAGTCGGTTACATGCTAAAGCTAATGCC-AATGTGAGCCCTGTTGTGATGGGAA
____________________________________________________________
consensus AGCTATGAGTCGGTTACATGCTAAAGCTAATGCCAAATGTGAGCCCTGTTGTTATGGGAA
. : . : . : . : . : . :
rJMSF042E19+ ATAAGATGGTTGAAAGAGTGATAAATATGCGGAAGCTTGCTCCTCCTAGGCTAGACAATA
rJMFF002D05+ ATAAGATGGTTGAAAGAGTGATAAATATGCGGAAGCTTGCTCCTCCTAGGCTAGACAATA
rJMFF016C07+ ATAAGATGGTTGAAAGAGTGATAAATATGCGGAAGCTTGCTCCTCCTAGGCTAGACAATA
rJMSF020E06+ ATAAGATGGTTGAAAGAGTGATAAATATGCGGAAGCTTGCTCCTCCTAGGCTAGACAATA
____________________________________________________________
consensus ATAAGATGGTTGAAAGAGTGATAAATATGCGGAAGCTTGCTCCTCCTAGGCTAGACAATA
. : . : . : . : . : . :
rJMSF042E19+ AAAGCTCACCCAATAGTAATTTATCTGCCAAGTCTTCCTCACCTGACAGCACAGGTTTTG
rJMFF002D05+ AAAGCTCACCCAATAGTAATTTATCTGCCAAGTCTTCCTCACCTGACAGCACAGGTTTTG
rJMFF016C07+ AAAGCTCACCCAATAGTAATTTATCTGCCAAGTCTTCCTCACCTGACAGCACAGGTTTTG
rJMSF020E06+ AAAGCTCACCCAATAGTAATTTATCTGCCAAGTCTTCCTCACCTGACAGCACAGGTTTTG
____________________________________________________________
consensus AAAGCTCACCCAATAGTAATTTATCTGCCAAGTCTTCCTCACCTGACAGCACAGGTTTTG
. : . : . : . : . : . :
rJMSF042E19+ GAAGAACACTGTCGAAGAAATCTTTGGATATGGCTATAAGGCATATGGATATAAGGCGAA
rJMFF002D05+ GAAGAACACTGTCGAAGAAATCTTTGGATATGGCTATAAGGCATATGGATATAAGGCGAA
rJMFF016C07+ GAAGAACACTGTCGAAGAAATCTTTGGATATGGCTATAAGGCATATGGATATAAGGCGAA
rJMSF020E06+ GAAGAACACTGTCGAAGAAATCTTTGGATATGGCTATAAGGCATATGGATATAAGGCGAA
rJMFF051I02+ TTTGGATATGGCTATAAGGCATATGGATATAAGGCGAA
____________________________________________________________
consensus GAAGAACACTGTCGAAGAAATCTTTGGATATGGCTATAAGGCATATGGATATAAGGCGAA
. : . : . : . : . : . :
rJMSF042E19+ CCATCCCAGGAAACCTACGACCATTAATGACTAATATTCCAGCATCGTCTATGTACAGTG
rJMFF002D05+ CCATCCCAGGAAACCTACGACCATTAATGACTAATATTCCAGCATCGTCTATGTACAGTG
rJMFF016C07+ CCATCCCAGGAAACCTACGACCATTAATGACTAATATTCCAGCATCGTCTATGTACAGTG
rJMSF020E06+ CCATCCCAGGAAACCTACGACCATTAATGACTAATATTCCAGCATCGTCTATGTACAGTG
rJMFF051I02+ CCATCCCAGGAAACCTACGACCATTAATGACTAATATTCCAGCATCGTCTATGTACAGTG
____________________________________________________________
consensus CCATCCCAGGAAACCTACGACCATTAATGACTAATATTCCAGCATCGTCTATGTACAGTG
. : . : . : . : . : . :
rJMSF042E19+ TGAGATCCGGGCCTAGTAGAAGCAGGACGGTGAGTGTTTCTGATTCACCCCTTGCAACAA
rJMFF002D05+ TGAGATCCGGGCCTAGTAGAAGCAGGACGGTGAGTGTTTCTGATTCACCCCTTGCAACAA
rJMFF016C07+ TGAGATCCGGGCCTAGTAGAAGCAGGACGGTGAGTGTTTCTGATTCACCCCTTGCAACAA
rJMSF020E06+ TGAGATCCGGGCCTAGTAGAAGCAGGACGGTGAGTGTTTCTGATTCACCCCTTGCAACAA
rJMSF036N03+ GCAACAA
rJMFF051I02+ TGAGATCCGGGCCTAGTAGAAGCAGGACGGTGAGTGTTTCTGATTCACCCCTTGCAACAA
____________________________________________________________
consensus TGAGATCCGGGCCTAGTAGAAGCAGGACGGTGAGTGTTTCTGATTCACCCCTTGCAACAA
. : . : . : . : . : . :
rJMSF042E19+ GCAGTAATGCTAGTTCTGAAGTGAGTGTTAATAACAATGCTGTGTGCATTGATGGACATG
rJMFF002D05+ GCAGTAATGCTAGTTCTGAAGTGAGTGTTAATAACAATGCTGTGTGCATTGATGGACATG
rJMFF016C07+ GCAGTAATGCTAGTTCTGAAGTGAGTGTTAATAACAATGCTGTGTGCATTGATGGACATG
rJMSF020E06+ GCAGTAATGCTAGTTCTGAAGTGAGTGTTAATAACAATGCTGTGTGCATTGATGGACATG
rJMSF036N03+ GCAGTAATTCTAGTTCTGAAGNGAGTGTTAATAACAATGCCGTGTGCATTGATGGACATG
rJMFF051I02+ GCAGTAATGCTAGTTCTGAAGTGAGTGTTAATAACAATGCTGTGTGCATTGATGGACATG
rJMFF048J08+ AACAATGCTGTGTGCATTGATGGACATG
____________________________________________________________
consensus GCAGTAATGCTAGTTCTGAAGTGAGTGTTAATAACAATGCTGTGTGCATTGATGGACATG
. : . : . : . : . : . :
rJMSF042E19+ GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTGCTCGATCTCCTCCCAGTGTCCATAGTA
rJMFF002D05+ GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTGCTCGATCTCCTCCCAGTGTCCATAGTA
rJMFF016C07+ GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTGCTCGATCTCCTCCCAGTGTCCATAGTA
rJMSF020E06+ GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTGCTCGATCTCCTCCCAGTGTCCATAGTA
rJMSF036N03+ GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTG
rJMFF051I02+ GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTGCTCGATCTCCTCCCAGTGTCCATAGTA
rJMFF048J08+ GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTGCTCGATCTCCTCCCAGTGTCCATAGTA
____________________________________________________________
consensus GAGGTGAGTGCGAAATTAGCAGTGATAAAGGTGCTCGATCTCCTCCCAGTGTCCATAGTA
. : . : . : . : . : . :
rJMSF042E19+ GTAGGTAATTCTGTGTTTGCCACGCTGCAGAGTAGAGTAGTATTGCTAGTTTTGAAGCAA
rJMFF002D05+ GTAGGTAATTCTGTGTTTGCCACGCTGCAGAGTAGAGTAGTATTGCTAGTTTTGAAGCAA
rJMFF016C07+ GTAGGTAATTCTGTGTTTGCCACGCTGCAGAGTAGAGTAGTATTGCTAGTTTTGAAGCAA
rJMSF020E06+ GTAGGTAATTCTGTGTTTGCCACGCTGCAGAGTAGAGTAGTATTGCTAGTTTTGAAGCAA
rJMFF051I02+ GTAGGTAATTCTGTGTTTGCCACGCTGCAGAGTAGAGTAGTATTGCTAGTTTTGAAGCAA
rJMFF048J08+ GTAGGTAATTCTGTGTTTGCCACGCTGCAGAGTAGAGTAGTATTGCTGTTTTTGAAGCAA
____________________________________________________________
consensus GTAGGTAATTCTGTGTTTGCCACGCTGCAGAGTAGAGTAGTATTGCTAGTTTTGAAGCAA
. : . : . : . : . : . :
rJMSF042E19+ GACGAGCGCGAGTTGAACAACCATTGTTTTTCAGGAGAAGAAAACTTTAACCCCGATGTT
rJMFF002D05+ GACGAGCGCGAGTTGAACAACCATTGTTTTTCAGGAGAAGAAAACTTTAACCCCGATGTT
rJMFF016C07+ GACGAGCGCGAGTTGAACAACCATTGTTTTTCAGGAGAAGAAAACTTTAACCCCGATGTT
rJMSF020E06+ GACGAGCGCGAGTTGAACAACCATTGTTTTTCAGGAGAAGAAAACTTTAACCCCGATGTT
rJMFF051I02+ GACGAGCGCGAGTTGAACAACCATTGTTTTTCAGGAGAAGAAAACTTTAACCCCGATGTT
rJMFF048J08+ GACGAGCGCGAGTTGAACAACCATTGTTTTTCAGGAGAAGAAAACTTTAACCCCGATGTT
____________________________________________________________
consensus GACGAGCGCGAGTTGAACAACCATTGTTTTTCAGGAGAAGAAAACTTTAACCCCGATGTT
. : . : . : . : . : . :
rJMSF042E19+ CATCTCGCTTGACTATGTAAAGATGCATGAACTAGGTAGGTGTTGTAGTTAGAGCTTCTA
rJMFF002D05+ CATCTCGCTTGACTATGTAAAGATGCATGAACTAGGTAGGTGTTGTAGTTAGAGCTTCTG
rJMFF016C07+ CATCTCGCTTGACTATGTAAAGATGCATGAACTAGGTAGGTGTTGTAGTTAGAGCTTCTG
rJMSF020E06+ CATCTCGCTTGACTATGTAAAGATGCATGAACTAGGTAGGTGTTGTAGTTAGAGCTTCTG
rJMFF051I02+ CATCTCGCTTGACTATGTAAAGATGCATGAACTAGGTAGGTGTTGTAGTTAGAGCTTCTG
rJMFF048J08+ CATCTCGCTTGACTATGTAAAGATGCATGAACTAGGTAGGTGTTGTAGTTAGAGCTTCTG
____________________________________________________________
consensus CATCTCGCTTGACTATGTAAAGATGCATGAACTAGGTAGGTGTTGTAGTTAGAGCTTCTG
. : . : . : . : . : . :
rJMSF042E19+ TACGATTAGAAACCCGAGTATGG
rJMFF002D05+ TACGATTAGAAACCCGAGTATGGTGAATCCA
rJMFF016C07+ TACGATTAGAAACCCGAGTATGGTGAATCCA
rJMSF020E06+ TACGATTAGAAACCCGAGTATGGTGAATCCA
rJMFF051I02+ TACGATTAGAAACCCGAGTATGGTGAATCCATTTTTATGCTATATTATTGTTCACGAAGG
rJMFF048J08+ TACGATTAGAAACCCGAGTATGGTGAATCCATTTTTATGCTATATTATTGTTCACGAAGG
____________________________________________________________
consensus TACGATTAGAAACCCGAGTATGGTGAATCCATTTTTATGCTATATTATTGTTCACGAAGG